RNA–Protein interactions for RNA: ENST00000482013.1

GGPS1-205, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 4

Gene GGPS1, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-205ENST00000482013 ERO1AQ96HE7 468 aa12.65□□□□□ -0.38
GGPS1-205ENST00000482013 KATNAL1Q9BW62 490 aa12.65□□□□□ -0.38
GGPS1-205ENST00000482013 GPR88Q9GZN0 384 aa12.65□□□□□ -0.38
GGPS1-205ENST00000482013 HAPLN2Q9GZV7 340 aa12.65□□□□□ -0.38
GGPS1-205ENST00000482013 LACRTQ9GZZ8 138 aa12.65□□□□□ -0.38
GGPS1-205ENST00000482013 IFT122Q9HBG6 1241 aa12.65□□□□□ -0.38
GGPS1-205ENST00000482013 RBAKQ9NYW8 714 aaPredicted RBP12.65□□□□□ -0.38
GGPS1-205ENST00000482013 ADAMTS1Q9UHI8 967 aa12.65□□□□□ -0.38
GGPS1-205ENST00000482013 AJAP1Q9UKB5 411 aaPredicted RBP12.65□□□□□ -0.38
GGPS1-205ENST00000482013 NENFQ9UMX5 172 aa12.65□□□□□ -0.38
GGPS1-205ENST00000482013 CNTNAP2Q9UHC6 1331 aa12.64□□□□□ -0.39
GGPS1-205ENST00000482013 CASP8AP2Q9UKL3 1982 aa12.64□□□□□ -0.39
GGPS1-205ENST00000482013 A0A087X0T9 212 aa12.64□□□□□ -0.39
GGPS1-205ENST00000482013 A0A0U1RQJ8 604 aa12.64□□□□□ -0.39
GGPS1-205ENST00000482013 MBLAC1A4D2B0 266 aaPredicted RBP12.64□□□□□ -0.39
GGPS1-205ENST00000482013 RCCD1A6NED2 376 aa12.64□□□□□ -0.39
GGPS1-205ENST00000482013 INO80B-WBP1J3KQ70 363 aa12.64□□□□□ -0.39
GGPS1-205ENST00000482013 HAS3O00219 553 aa12.64□□□□□ -0.39
GGPS1-205ENST00000482013 ADCY6O43306 1168 aa12.64□□□□□ -0.39
GGPS1-205ENST00000482013 FAM189A1O60320 539 aa12.64□□□□□ -0.39
GGPS1-205ENST00000482013 EVI5O60447 810 aa12.64□□□□□ -0.39
GGPS1-205ENST00000482013 DUSP11O75319 330 aaKnown RBP12.64□□□□□ -0.39
GGPS1-205ENST00000482013 EDN1P05305 212 aa12.64□□□□□ -0.39
GGPS1-205ENST00000482013 FAM228BP0C875 321 aa12.64□□□□□ -0.39
GGPS1-205ENST00000482013 DLATP10515 647 aaKnown RBP12.64□□□□□ -0.39
GGPS1-205ENST00000482013 AKR1A1P14550 325 aa12.64□□□□□ -0.39
GGPS1-205ENST00000482013 TNNI1P19237 187 aa12.64□□□□□ -0.39
GGPS1-205ENST00000482013 TUBB4BP68371 445 aa12.64□□□□□ -0.39
GGPS1-205ENST00000482013 IGBP1P78318 339 aa12.64□□□□□ -0.39
GGPS1-205ENST00000482013 NKX3-2P78367 333 aa12.64□□□□□ -0.39
GGPS1-205ENST00000482013 ARID5AQ03989 594 aa12.64□□□□□ -0.39
GGPS1-205ENST00000482013 WDR44Q5JSH3 913 aa12.64□□□□□ -0.39
GGPS1-205ENST00000482013 PRAMEF19Q5SWL8 479 aa12.64□□□□□ -0.39
GGPS1-205ENST00000482013 MARCH8Q5T0T0 291 aa12.64□□□□□ -0.39
GGPS1-205ENST00000482013 MFSD14CQ5VZR4 134 aa12.64□□□□□ -0.39
GGPS1-205ENST00000482013 WDR49Q8IV35 697 aa12.64□□□□□ -0.39
GGPS1-205ENST00000482013 SLC30A5Q8TAD4 765 aa12.64□□□□□ -0.39
GGPS1-205ENST00000482013 ATRIPQ8WXE1 791 aa12.64□□□□□ -0.39
GGPS1-205ENST00000482013 SHC3Q92529 594 aa12.64□□□□□ -0.39
GGPS1-205ENST00000482013 ZNF516Q92618 1163 aa12.64□□□□□ -0.39
GGPS1-205ENST00000482013 SEMA4DQ92854 862 aa12.64□□□□□ -0.39
GGPS1-205ENST00000482013 NLRP4Q96MN2 994 aa12.64□□□□□ -0.39
GGPS1-205ENST00000482013 SYT11Q9BT88 431 aa12.64□□□□□ -0.39
GGPS1-205ENST00000482013 TCHPQ9BT92 498 aa12.64□□□□□ -0.39
GGPS1-205ENST00000482013 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.64□□□□□ -0.39
GGPS1-205ENST00000482013 CFHR5Q9BXR6 569 aa12.64□□□□□ -0.39
GGPS1-205ENST00000482013 IRX2Q9BZI1 471 aaPredicted RBP12.64□□□□□ -0.39
GGPS1-205ENST00000482013 INO80BQ9C086 356 aaPredicted RBP12.64□□□□□ -0.39
GGPS1-205ENST00000482013 ANKFY1Q9P2R3 1169 aa12.64□□□□□ -0.39
GGPS1-205ENST00000482013 CPSF3Q9UKF6 684 aaKnown RBP12.64□□□□□ -0.39
GGPS1-205ENST00000482013 AKT3Q9Y243 479 aa12.64□□□□□ -0.39
GGPS1-205ENST00000482013 A0A0A6YYK5 440 aaPredicted RBP12.63□□□□□ -0.39
GGPS1-205ENST00000482013 SMIM35A0A1B0GVV1 85 aa12.63□□□□□ -0.39
GGPS1-205ENST00000482013 FOXN3O00409 490 aaPredicted RBP12.63□□□□□ -0.39
GGPS1-205ENST00000482013 IL18RAPO95256 599 aa12.63□□□□□ -0.39
GGPS1-205ENST00000482013 ABL1P00519 1130 aa12.63□□□□□ -0.39
GGPS1-205ENST00000482013 MCF2P10911 925 aa12.63□□□□□ -0.39
GGPS1-205ENST00000482013 TNFAIP3P21580 790 aa12.63□□□□□ -0.39
GGPS1-205ENST00000482013 CYP2C19P33261 490 aa12.63□□□□□ -0.39
GGPS1-205ENST00000482013 PSMC4P43686 418 aa12.63□□□□□ -0.39
GGPS1-205ENST00000482013 ACOT2P49753 483 aa12.63□□□□□ -0.39
GGPS1-205ENST00000482013 LACTBP83111 547 aaPredicted RBP12.63□□□□□ -0.39
GGPS1-205ENST00000482013 MFSD10Q14728 455 aa12.63□□□□□ -0.39
GGPS1-205ENST00000482013 CCL14Q16627 93 aa12.63□□□□□ -0.39
GGPS1-205ENST00000482013 IFI16Q16666 785 aaKnown RBP12.63□□□□□ -0.39
GGPS1-205ENST00000482013 ALKBH5Q6P6C2 394 aaKnown RBP12.63□□□□□ -0.39
GGPS1-205ENST00000482013 APBB1IPQ7Z5R6 666 aaPredicted RBP12.63□□□□□ -0.39
GGPS1-205ENST00000482013 ARHGEF19Q8IW93 802 aa12.63□□□□□ -0.39
GGPS1-205ENST00000482013 FAM71AQ8IYT1 594 aa12.63□□□□□ -0.39
GGPS1-205ENST00000482013 KIAA0319LQ8IZA0 1049 aa12.63□□□□□ -0.39
GGPS1-205ENST00000482013 HELQQ8TDG4 1101 aa12.63□□□□□ -0.39
GGPS1-205ENST00000482013 TAS1R2Q8TE23 839 aa12.63□□□□□ -0.39
GGPS1-205ENST00000482013 KAT2BQ92831 832 aa12.63□□□□□ -0.39
GGPS1-205ENST00000482013 CALR3Q96L12 384 aaKnown RBP12.63□□□□□ -0.39
GGPS1-205ENST00000482013 ALS2CR12Q96Q35 445 aa12.63□□□□□ -0.39
GGPS1-205ENST00000482013 POP1Q99575 1024 aaKnown RBP12.63□□□□□ -0.39
GGPS1-205ENST00000482013 PDE11AQ9HCR9 933 aa12.63□□□□□ -0.39
GGPS1-205ENST00000482013 CDC23Q9UJX2 597 aa12.63□□□□□ -0.39
GGPS1-205ENST00000482013 NAGPAQ9UK23 515 aa12.63□□□□□ -0.39
GGPS1-205ENST00000482013 MRFAP1Q9Y605 127 aa12.63□□□□□ -0.39
GGPS1-205ENST00000482013 A0A087WZ62 844 aa12.62□□□□□ -0.39
GGPS1-205ENST00000482013 FANCGO15287 622 aa12.62□□□□□ -0.39
GGPS1-205ENST00000482013 B4GALT4O60513 344 aa12.62□□□□□ -0.39
GGPS1-205ENST00000482013 HLA-DRAP01903 254 aa12.62□□□□□ -0.39
GGPS1-205ENST00000482013 SMIM10L2AP0DMW4 78 aa12.62□□□□□ -0.39
GGPS1-205ENST00000482013 SMIM10L2BP0DMW5 78 aa12.62□□□□□ -0.39
GGPS1-205ENST00000482013 GNAT1P11488 350 aa12.62□□□□□ -0.39
GGPS1-205ENST00000482013 PRLRP16471 622 aa12.62□□□□□ -0.39
GGPS1-205ENST00000482013 PSEN2P49810 448 aa12.62□□□□□ -0.39
GGPS1-205ENST00000482013 BPIFB4P59827 614 aa12.62□□□□□ -0.39
GGPS1-205ENST00000482013 ADAM17P78536 824 aa12.62□□□□□ -0.39
GGPS1-205ENST00000482013 ARHGAP44Q17R89 818 aa12.62□□□□□ -0.39
GGPS1-205ENST00000482013 KIAA0753Q2KHM9 967 aa12.62□□□□□ -0.39
GGPS1-205ENST00000482013 DEFB115Q30KQ5 88 aa12.62□□□□□ -0.39
GGPS1-205ENST00000482013 PAPD7Q5XG87 772 aaKnown RBP12.62□□□□□ -0.39
GGPS1-205ENST00000482013 NFRKBQ6P4R8 1299 aa12.62□□□□□ -0.39
GGPS1-205ENST00000482013 PPM1KQ8N3J5 372 aa12.62□□□□□ -0.39
GGPS1-205ENST00000482013 NME8Q8N427 588 aa12.62□□□□□ -0.39
GGPS1-205ENST00000482013 UBE2Q2Q8WVN8 375 aa12.62□□□□□ -0.39
GGPS1-205ENST00000482013 FAXDC2Q96IV6 333 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms