RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 ZNF700Q9H0M5 742 aa6.59□□□□□ -1.35
UPF3A-207ENST00000481131 BHMT2Q9H2M3 363 aa6.59□□□□□ -1.35
UPF3A-207ENST00000481131 L1RE1Q9UN81 338 aa6.59□□□□□ -1.35
UPF3A-207ENST00000481131 ANO9A1A5B4 782 aa6.58□□□□□ -1.36
UPF3A-207ENST00000481131 PMM2O15305 246 aa6.58□□□□□ -1.36
UPF3A-207ENST00000481131 SLC16A6O15403 523 aa6.58□□□□□ -1.36
UPF3A-207ENST00000481131 VSIG10L2P0DP72 767 aa6.58□□□□□ -1.36
UPF3A-207ENST00000481131 PCSK1P29120 753 aa6.58□□□□□ -1.36
UPF3A-207ENST00000481131 GUCY1A2P33402 732 aa6.58□□□□□ -1.36
UPF3A-207ENST00000481131 CRHR1P34998 444 aa6.58□□□□□ -1.36
UPF3A-207ENST00000481131 HK3P52790 923 aa6.58□□□□□ -1.36
UPF3A-207ENST00000481131 NFYCQ13952 458 aa6.58□□□□□ -1.36
UPF3A-207ENST00000481131 SAFB2Q14151 953 aaKnown RBP eCLIP6.58□□□□□ -1.36
UPF3A-207ENST00000481131 SAFBQ15424 915 aaKnown RBP eCLIP6.58□□□□□ -1.36
UPF3A-207ENST00000481131 PRAMEF14Q5SWL7 426 aa6.58□□□□□ -1.36
UPF3A-207ENST00000481131 CCDC149Q6ZUS6 474 aa6.58□□□□□ -1.36
UPF3A-207ENST00000481131 RALYLQ86SE5 291 aaKnown RBP6.58□□□□□ -1.36
UPF3A-207ENST00000481131 ANKRD53Q8N9V6 530 aa6.58□□□□□ -1.36
UPF3A-207ENST00000481131 LCORQ96JN0 433 aaPredicted RBP6.58□□□□□ -1.36
UPF3A-207ENST00000481131 NT5C1BQ96P26 610 aa6.58□□□□□ -1.36
UPF3A-207ENST00000481131 GPHA2Q96T91 129 aa6.58□□□□□ -1.36
UPF3A-207ENST00000481131 SLC6A15Q9H2J7 730 aa6.58□□□□□ -1.36
UPF3A-207ENST00000481131 MANSC1Q9H8J5 431 aa6.58□□□□□ -1.36
UPF3A-207ENST00000481131 KMT5AQ9NQR1 393 aa6.58□□□□□ -1.36
UPF3A-207ENST00000481131 USP25Q9UHP3 1055 aa6.58□□□□□ -1.36
UPF3A-207ENST00000481131 NCAPD3P42695 1498 aa6.58□□□□□ -1.36
UPF3A-207ENST00000481131 BAZ1BQ9UIG0 1483 aaKnown RBP6.58□□□□□ -1.36
UPF3A-207ENST00000481131 RSF1Q96T23 1441 aaPredicted RBP6.58□□□□□ -1.36
UPF3A-207ENST00000481131 MYBBP1AQ9BQG0 1328 aaKnown RBP6.57□□□□□ -1.36
UPF3A-207ENST00000481131 MATN2O00339 956 aa6.57□□□□□ -1.36
UPF3A-207ENST00000481131 ARHGAP6O43182 974 aa6.57□□□□□ -1.36
UPF3A-207ENST00000481131 SLC5A1P13866 664 aa6.57□□□□□ -1.36
UPF3A-207ENST00000481131 PHKG2P15735 406 aa6.57□□□□□ -1.36
UPF3A-207ENST00000481131 FPR1P21462 350 aa6.57□□□□□ -1.36
UPF3A-207ENST00000481131 CASRP41180 1078 aa6.57□□□□□ -1.36
UPF3A-207ENST00000481131 IL12RB1P42701 662 aa6.57□□□□□ -1.36
UPF3A-207ENST00000481131 SLURP1P55000 103 aa6.57□□□□□ -1.36
UPF3A-207ENST00000481131 PER3P56645 1201 aa6.57□□□□□ -1.36
UPF3A-207ENST00000481131 ZNF280AP59817 542 aaPredicted RBP6.57□□□□□ -1.36
UPF3A-207ENST00000481131 TLE1Q04724 770 aa6.57□□□□□ -1.36
UPF3A-207ENST00000481131 DUSP2Q05923 314 aa6.57□□□□□ -1.36
UPF3A-207ENST00000481131 MTM1Q13496 603 aa6.57□□□□□ -1.36
UPF3A-207ENST00000481131 ANO6Q4KMQ2 910 aa6.57□□□□□ -1.36
UPF3A-207ENST00000481131 KHDC1Q4VXA5 237 aaKnown RBP6.57□□□□□ -1.36
UPF3A-207ENST00000481131 ZMAT1Q5H9K5 638 aa6.57□□□□□ -1.36
UPF3A-207ENST00000481131 KBTBD2Q8IY47 623 aa6.57□□□□□ -1.36
UPF3A-207ENST00000481131 FBXO41Q8TF61 875 aa6.57□□□□□ -1.36
UPF3A-207ENST00000481131 STON2Q8WXE9 905 aa6.57□□□□□ -1.36
UPF3A-207ENST00000481131 TMX3Q96JJ7 454 aa6.57□□□□□ -1.36
UPF3A-207ENST00000481131 RPL10LQ96L21 214 aaKnown RBP6.57□□□□□ -1.36
UPF3A-207ENST00000481131 UHRF1Q96T88 793 aaPredicted RBP6.57□□□□□ -1.36
UPF3A-207ENST00000481131 VRK1Q99986 396 aaPredicted RBP6.57□□□□□ -1.36
UPF3A-207ENST00000481131 ENKD1Q9H0I2 346 aa6.57□□□□□ -1.36
UPF3A-207ENST00000481131 LANCL2Q9NS86 450 aa6.57□□□□□ -1.36
UPF3A-207ENST00000481131 AJAP1Q9UKB5 411 aaPredicted RBP6.57□□□□□ -1.36
UPF3A-207ENST00000481131 PCDHGB6Q9Y5F9 930 aa6.57□□□□□ -1.36
UPF3A-207ENST00000481131 PCDHA3Q9Y5H8 950 aa6.57□□□□□ -1.36
UPF3A-207ENST00000481131 ATRNL1Q5VV63 1379 aa6.57□□□□□ -1.36
UPF3A-207ENST00000481131 MROH6A6NGR9 719 aa6.56□□□□□ -1.36
UPF3A-207ENST00000481131 CAPN8A6NHC0 703 aa6.56□□□□□ -1.36
UPF3A-207ENST00000481131 B4GALT3O60512 393 aa6.56□□□□□ -1.36
UPF3A-207ENST00000481131 GASTP01350 101 aa6.56□□□□□ -1.36
UPF3A-207ENST00000481131 JUNP05412 331 aaKnown RBP6.56□□□□□ -1.36
UPF3A-207ENST00000481131 NBPF7P0C2Y1 421 aaPredicted RBP6.56□□□□□ -1.36
UPF3A-207ENST00000481131 GYPEP15421 78 aa6.56□□□□□ -1.36
UPF3A-207ENST00000481131 RAB1AP62820 205 aa6.56□□□□□ -1.36
UPF3A-207ENST00000481131 NKX6-1P78426 367 aaPredicted RBP6.56□□□□□ -1.36
UPF3A-207ENST00000481131 SNAPC2Q13487 334 aa6.56□□□□□ -1.36
UPF3A-207ENST00000481131 HDAC1Q13547 482 aaPredicted RBP6.56□□□□□ -1.36
UPF3A-207ENST00000481131 SEMA5AQ13591 1074 aa6.56□□□□□ -1.36
UPF3A-207ENST00000481131 CNN3Q15417 329 aaKnown RBP6.56□□□□□ -1.36
UPF3A-207ENST00000481131 KIAA0753Q2KHM9 967 aa6.56□□□□□ -1.36
UPF3A-207ENST00000481131 GAGE13Q4V321 117 aa6.56□□□□□ -1.36
UPF3A-207ENST00000481131 THEMIS2Q5TEJ8 643 aa6.56□□□□□ -1.36
UPF3A-207ENST00000481131 HEATR3Q7Z4Q2 680 aa6.56□□□□□ -1.36
UPF3A-207ENST00000481131 ADGRE4PQ86SQ3 457 aa6.56□□□□□ -1.36
UPF3A-207ENST00000481131 DAAM2Q86T65 1068 aa6.56□□□□□ -1.36
UPF3A-207ENST00000481131 RSPH3Q86UC2 560 aa6.56□□□□□ -1.36
UPF3A-207ENST00000481131 C3orf20Q8ND61 904 aa6.56□□□□□ -1.36
UPF3A-207ENST00000481131 MDM1Q8TC05 714 aa6.56□□□□□ -1.36
UPF3A-207ENST00000481131 CYFIP2Q96F07 1278 aa6.56□□□□□ -1.36
UPF3A-207ENST00000481131 CDK5RAP3Q96JB5 506 aa6.56□□□□□ -1.36
UPF3A-207ENST00000481131 RPS6KC1Q96S38 1066 aa6.56□□□□□ -1.36
UPF3A-207ENST00000481131 NAA15Q9BXJ9 866 aaKnown RBP6.56□□□□□ -1.36
UPF3A-207ENST00000481131 CHMP4AQ9BY43 222 aa6.56□□□□□ -1.36
UPF3A-207ENST00000481131 ATP6V0A4Q9HBG4 840 aa6.56□□□□□ -1.36
UPF3A-207ENST00000481131 JADE2Q9NQC1 790 aa6.56□□□□□ -1.36
UPF3A-207ENST00000481131 SLC4A7Q9Y6M7 1214 aa6.56□□□□□ -1.36
UPF3A-207ENST00000481131 A0A088AWK7 358 aa6.55□□□□□ -1.36
UPF3A-207ENST00000481131 GPR32O75388 356 aa6.55□□□□□ -1.36
UPF3A-207ENST00000481131 RPLP2P05387 115 aaKnown RBP6.55□□□□□ -1.36
UPF3A-207ENST00000481131 DDCP20711 480 aa6.55□□□□□ -1.36
UPF3A-207ENST00000481131 MALP21145 153 aa6.55□□□□□ -1.36
UPF3A-207ENST00000481131 FAM193AP78312 1265 aa6.55□□□□□ -1.36
UPF3A-207ENST00000481131 RAB39AQ14964 217 aa6.55□□□□□ -1.36
UPF3A-207ENST00000481131 SAMD3Q8N6K7 520 aa6.55□□□□□ -1.36
UPF3A-207ENST00000481131 DCBLD1Q8N8Z6 715 aa6.55□□□□□ -1.36
UPF3A-207ENST00000481131 CEP95Q96GE4 821 aa6.55□□□□□ -1.36
UPF3A-207ENST00000481131 TOX2Q96NM4 488 aa6.55□□□□□ -1.36
UPF3A-207ENST00000481131 MPHOSPH6Q99547 160 aaKnown RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms