RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 HOXB8P17481 243 aaPredicted RBP18.68■□□□□ 0.58
HSPG2-209ENST00000480900 SSTR3P32745 418 aaPredicted RBP18.68■□□□□ 0.58
HSPG2-209ENST00000480900 LLGL2Q6P1M3 1020 aa18.68■□□□□ 0.58
HSPG2-209ENST00000480900 RNF168Q8IYW5 571 aaPredicted RBP18.68■□□□□ 0.58
HSPG2-209ENST00000480900 RAD54LQ92698 747 aa18.68■□□□□ 0.58
HSPG2-209ENST00000480900 POP1Q99575 1024 aaKnown RBP18.68■□□□□ 0.58
HSPG2-209ENST00000480900 PTPRHQ9HD43 1115 aa18.68■□□□□ 0.58
HSPG2-209ENST00000480900 GDAQ9Y2T3 454 aa18.68■□□□□ 0.58
HSPG2-209ENST00000480900 PLXNA3P51805 1871 aa18.68■□□□□ 0.58
HSPG2-209ENST00000480900 VWA8A3KMH1 1905 aa18.67■□□□□ 0.58
HSPG2-209ENST00000480900 NPHP3-ACAD11A0A0J9YXS1 232 aa18.67■□□□□ 0.58
HSPG2-209ENST00000480900 H0YCG3 227 aa18.67■□□□□ 0.58
HSPG2-209ENST00000480900 PTGESO14684 152 aa18.67■□□□□ 0.58
HSPG2-209ENST00000480900 URODP06132 367 aa18.67■□□□□ 0.58
HSPG2-209ENST00000480900 THP07101 528 aa18.67■□□□□ 0.58
HSPG2-209ENST00000480900 PDIA4P13667 645 aaKnown RBP18.67■□□□□ 0.58
HSPG2-209ENST00000480900 CEBPZQ03701 1054 aaKnown RBP18.67■□□□□ 0.58
HSPG2-209ENST00000480900 STRN3Q13033 797 aa18.67■□□□□ 0.58
HSPG2-209ENST00000480900 MCM6Q14566 821 aa18.67■□□□□ 0.58
HSPG2-209ENST00000480900 ZNF568Q3ZCX4 644 aa18.67■□□□□ 0.58
HSPG2-209ENST00000480900 SYCE2Q6PIF2 218 aa18.67■□□□□ 0.58
HSPG2-209ENST00000480900 PPFIBP1Q86W92 1011 aa18.67■□□□□ 0.58
HSPG2-209ENST00000480900 SUSD6Q92537 303 aa18.67■□□□□ 0.58
HSPG2-209ENST00000480900 LARP4BQ92615 738 aaKnown RBP18.67■□□□□ 0.58
HSPG2-209ENST00000480900 KCNN1Q92952 543 aa18.67■□□□□ 0.58
HSPG2-209ENST00000480900 EPSTI1Q96J88 318 aa18.67■□□□□ 0.58
HSPG2-209ENST00000480900 USP28Q96RU2 1077 aa18.67■□□□□ 0.58
HSPG2-209ENST00000480900 REEP2Q9BRK0 252 aa18.67■□□□□ 0.58
HSPG2-209ENST00000480900 TARS2Q9BW92 718 aaKnown RBP18.67■□□□□ 0.58
HSPG2-209ENST00000480900 EMILIN2Q9BXX0 1053 aa18.67■□□□□ 0.58
HSPG2-209ENST00000480900 CDT1Q9H211 546 aa18.67■□□□□ 0.58
HSPG2-209ENST00000480900 MRPL17Q9NRX2 175 aaKnown RBP18.67■□□□□ 0.58
HSPG2-209ENST00000480900 SSX2IPQ9Y2D8 614 aa18.67■□□□□ 0.58
HSPG2-209ENST00000480900 LILRB3O75022 631 aa18.66■□□□□ 0.58
HSPG2-209ENST00000480900 BRD1O95696 1058 aa18.66■□□□□ 0.58
HSPG2-209ENST00000480900 HSP90AA1P07900 732 aaKnown RBP18.66■□□□□ 0.58
HSPG2-209ENST00000480900 MAPTP10636 758 aaKnown RBP18.66■□□□□ 0.58
HSPG2-209ENST00000480900 SCP2P22307 547 aa18.66■□□□□ 0.58
HSPG2-209ENST00000480900 PROZP22891 400 aa18.66■□□□□ 0.58
HSPG2-209ENST00000480900 GRM5P41594 1212 aa18.66■□□□□ 0.58
HSPG2-209ENST00000480900 ZNF131P52739 623 aa18.66■□□□□ 0.58
HSPG2-209ENST00000480900 CACNB1Q02641 598 aaPredicted RBP18.66■□□□□ 0.58
HSPG2-209ENST00000480900 DHX8Q14562 1220 aaKnown RBP18.66■□□□□ 0.58
HSPG2-209ENST00000480900 SLC39A14Q15043 492 aa18.66■□□□□ 0.58
HSPG2-209ENST00000480900 TPRNQ4KMQ1 711 aa18.66■□□□□ 0.58
HSPG2-209ENST00000480900 MPZL3Q6UWV2 235 aa18.66■□□□□ 0.58
HSPG2-209ENST00000480900 USP49Q70CQ1 688 aa18.66■□□□□ 0.58
HSPG2-209ENST00000480900 S1PR5Q9H228 398 aa18.66■□□□□ 0.58
HSPG2-209ENST00000480900 DZANK1Q9NVP4 752 aa18.66■□□□□ 0.58
HSPG2-209ENST00000480900 STK17AQ9UEE5 414 aa18.66■□□□□ 0.58
HSPG2-209ENST00000480900 CCDC39Q9UFE4 941 aa18.66■□□□□ 0.58
HSPG2-209ENST00000480900 ADAM28Q9UKQ2 775 aa18.66■□□□□ 0.58
HSPG2-209ENST00000480900 C2orf16Q68DN1 1984 aa18.66■□□□□ 0.58
HSPG2-209ENST00000480900 MYO10Q9HD67 2058 aa18.65■□□□□ 0.58
HSPG2-209ENST00000480900 F8W810 466 aa18.65■□□□□ 0.58
HSPG2-209ENST00000480900 ABLIM1O14639 778 aa18.65■□□□□ 0.58
HSPG2-209ENST00000480900 MCF2P10911 925 aa18.65■□□□□ 0.58
HSPG2-209ENST00000480900 DDIT3P35638 169 aa18.65■□□□□ 0.58
HSPG2-209ENST00000480900 TXLNAP40222 546 aa18.65■□□□□ 0.58
HSPG2-209ENST00000480900 NASPP49321 788 aaPredicted RBP18.65■□□□□ 0.58
HSPG2-209ENST00000480900 GLUD2P49448 558 aa18.65■□□□□ 0.58
HSPG2-209ENST00000480900 NCKAP1LP55160 1127 aa18.65■□□□□ 0.58
HSPG2-209ENST00000480900 HSP90AA2PQ14568 343 aaPredicted RBP18.65■□□□□ 0.58
HSPG2-209ENST00000480900 NAB2Q15742 525 aa18.65■□□□□ 0.58
HSPG2-209ENST00000480900 SPECC1Q5M775 1068 aa18.65■□□□□ 0.58
HSPG2-209ENST00000480900 FUT10Q6P4F1 479 aa18.65■□□□□ 0.58
HSPG2-209ENST00000480900 GPR65Q8IYL9 337 aa18.65■□□□□ 0.58
HSPG2-209ENST00000480900 KRI1Q8N9T8 703 aaKnown RBP18.65■□□□□ 0.58
HSPG2-209ENST00000480900 SLC22A17Q8WUG5 538 aa18.65■□□□□ 0.58
HSPG2-209ENST00000480900 CLIC6Q96NY7 704 aa18.65■□□□□ 0.58
HSPG2-209ENST00000480900 CCDC94Q9BW85 323 aaPredicted RBP18.65■□□□□ 0.58
HSPG2-209ENST00000480900 CXCL16Q9H2A7 254 aa18.65■□□□□ 0.58
HSPG2-209ENST00000480900 TOPORSQ9NS56 1045 aaPredicted RBP18.65■□□□□ 0.58
HSPG2-209ENST00000480900 TOM1L1O75674 476 aa18.64■□□□□ 0.57
HSPG2-209ENST00000480900 FAM13AO94988 1023 aa18.64■□□□□ 0.57
HSPG2-209ENST00000480900 KRT18P05783 430 aaKnown RBP18.64■□□□□ 0.57
HSPG2-209ENST00000480900 CNPP09543 421 aaKnown RBP18.64■□□□□ 0.57
HSPG2-209ENST00000480900 YARSP54577 528 aaKnown RBP18.64■□□□□ 0.57
HSPG2-209ENST00000480900 DSG1Q02413 1049 aa18.64■□□□□ 0.57
HSPG2-209ENST00000480900 ITIH3Q06033 890 aa18.64■□□□□ 0.57
HSPG2-209ENST00000480900 CBX2Q14781 532 aaPredicted RBP18.64■□□□□ 0.57
HSPG2-209ENST00000480900 KIAA0319Q5VV43 1072 aa18.64■□□□□ 0.57
HSPG2-209ENST00000480900 ZPBP2Q6X784 338 aa18.64■□□□□ 0.57
HSPG2-209ENST00000480900 TAS1R1Q7RTX1 841 aa18.64■□□□□ 0.57
HSPG2-209ENST00000480900 HAUS6Q7Z4H7 955 aa18.64■□□□□ 0.57
HSPG2-209ENST00000480900 CEP120Q8N960 986 aa18.64■□□□□ 0.57
HSPG2-209ENST00000480900 KHSRPQ92945 711 aaKnown RBP eCLIP18.64■□□□□ 0.57
HSPG2-209ENST00000480900 KLHL5Q96PQ7 755 aa18.64■□□□□ 0.57
HSPG2-209ENST00000480900 TCHPQ9BT92 498 aa18.64■□□□□ 0.57
HSPG2-209ENST00000480900 PHF7Q9BWX1 381 aaPredicted RBP18.64■□□□□ 0.57
HSPG2-209ENST00000480900 GPR62Q9BZJ7 368 aa18.64■□□□□ 0.57
HSPG2-209ENST00000480900 PARVGQ9HBI0 331 aa18.64■□□□□ 0.57
HSPG2-209ENST00000480900 CHST7Q9NS84 486 aa18.64■□□□□ 0.57
HSPG2-209ENST00000480900 DENND4AQ7Z401 1863 aa18.64■□□□□ 0.57
HSPG2-209ENST00000480900 CASTOR2A6NHX0 329 aa18.63■□□□□ 0.57
HSPG2-209ENST00000480900 TBCAO75347 108 aaKnown RBP18.63■□□□□ 0.57
HSPG2-209ENST00000480900 ADH1AP07327 375 aa18.63■□□□□ 0.57
HSPG2-209ENST00000480900 EPCAMP16422 314 aa18.63■□□□□ 0.57
HSPG2-209ENST00000480900 KLRC2P26717 231 aa18.63■□□□□ 0.57
HSPG2-209ENST00000480900 NOLC1Q14978 699 aaKnown RBP eCLIP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms