RNA–Protein interactions for RNA: ENST00000480495.1

TDP2-205, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 1 (best)

Gene TDP2, Length 714 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-205ENST00000480495 HSP90AA2PQ14568 343 aaPredicted RBP16.5■□□□□ 0.23
TDP2-205ENST00000480495 TMEM31Q5JXX7 168 aa16.5■□□□□ 0.23
TDP2-205ENST00000480495 TAS1R3Q7RTX0 852 aa16.5■□□□□ 0.23
TDP2-205ENST00000480495 GPR65Q8IYL9 337 aa16.5■□□□□ 0.23
TDP2-205ENST00000480495 SNX21Q969T3 373 aa16.5■□□□□ 0.23
TDP2-205ENST00000480495 NECTIN4Q96NY8 510 aa16.5■□□□□ 0.23
TDP2-205ENST00000480495 ADAM7Q9H2U9 754 aa16.5■□□□□ 0.23
TDP2-205ENST00000480495 PTPRHQ9HD43 1115 aa16.5■□□□□ 0.23
TDP2-205ENST00000480495 LARSQ9P2J5 1176 aaKnown RBP16.5■□□□□ 0.23
TDP2-205ENST00000480495 ADAM28Q9UKQ2 775 aa16.5■□□□□ 0.23
TDP2-205ENST00000480495 ODF2LQ9ULJ1 636 aa16.5■□□□□ 0.23
TDP2-205ENST00000480495 GDAQ9Y2T3 454 aa16.5■□□□□ 0.23
TDP2-205ENST00000480495 SFI1A8K8P3 1242 aa16.49■□□□□ 0.23
TDP2-205ENST00000480495 TADA2AO75478 443 aa16.49■□□□□ 0.23
TDP2-205ENST00000480495 EPCAMP16422 314 aa16.49■□□□□ 0.23
TDP2-205ENST00000480495 GRM5P41594 1212 aa16.49■□□□□ 0.23
TDP2-205ENST00000480495 DSG1Q02413 1049 aa16.49■□□□□ 0.23
TDP2-205ENST00000480495 GRIN1Q05586 938 aa16.49■□□□□ 0.23
TDP2-205ENST00000480495 STRN3Q13033 797 aa16.49■□□□□ 0.23
TDP2-205ENST00000480495 PTPAQ15257 358 aa16.49■□□□□ 0.23
TDP2-205ENST00000480495 USP41Q3LFD5 358 aa16.49■□□□□ 0.23
TDP2-205ENST00000480495 ARSHQ5FYA8 562 aa16.49■□□□□ 0.23
TDP2-205ENST00000480495 KIAA0319Q5VV43 1072 aa16.49■□□□□ 0.23
TDP2-205ENST00000480495 KIAA1841Q6NSI8 718 aa16.49■□□□□ 0.23
TDP2-205ENST00000480495 FUT10Q6P4F1 479 aa16.49■□□□□ 0.23
TDP2-205ENST00000480495 TAS1R1Q7RTX1 841 aa16.49■□□□□ 0.23
TDP2-205ENST00000480495 RNF135Q8IUD6 432 aa16.49■□□□□ 0.23
TDP2-205ENST00000480495 TMEM161BQ8NDZ6 487 aa16.49■□□□□ 0.23
TDP2-205ENST00000480495 RASSF8Q8NHQ8 419 aa16.49■□□□□ 0.23
TDP2-205ENST00000480495 RIPOR3Q96MK2 946 aa16.49■□□□□ 0.23
TDP2-205ENST00000480495 CCDC94Q9BW85 323 aaPredicted RBP16.49■□□□□ 0.23
TDP2-205ENST00000480495 APOL5Q9BWW9 433 aa16.49■□□□□ 0.23
TDP2-205ENST00000480495 CCSER1Q9C0I3 900 aa16.49■□□□□ 0.23
TDP2-205ENST00000480495 ZSCAN16Q9H4T2 348 aaPredicted RBP16.49■□□□□ 0.23
TDP2-205ENST00000480495 RXFP1Q9HBX9 757 aa16.49■□□□□ 0.23
TDP2-205ENST00000480495 CHST7Q9NS84 486 aa16.49■□□□□ 0.23
TDP2-205ENST00000480495 CLIC4Q9Y696 253 aa16.49■□□□□ 0.23
TDP2-205ENST00000480495 F8W810 466 aa16.48■□□□□ 0.23
TDP2-205ENST00000480495 C2CD2LO14523 706 aa16.48■□□□□ 0.23
TDP2-205ENST00000480495 BRD1O95696 1058 aa16.48■□□□□ 0.23
TDP2-205ENST00000480495 ADH1AP07327 375 aa16.48■□□□□ 0.23
TDP2-205ENST00000480495 MCF2P10911 925 aa16.48■□□□□ 0.23
TDP2-205ENST00000480495 PLCG1P19174 1290 aa16.48■□□□□ 0.23
TDP2-205ENST00000480495 SCP2P22307 547 aa16.48■□□□□ 0.23
TDP2-205ENST00000480495 PROZP22891 400 aa16.48■□□□□ 0.23
TDP2-205ENST00000480495 MTHFRP42898 656 aa16.48■□□□□ 0.23
TDP2-205ENST00000480495 CLCN4P51793 760 aa16.48■□□□□ 0.23
TDP2-205ENST00000480495 YARSP54577 528 aaKnown RBP16.48■□□□□ 0.23
TDP2-205ENST00000480495 CREMQ03060 361 aa16.48■□□□□ 0.23
TDP2-205ENST00000480495 ZNF568Q3ZCX4 644 aa16.48■□□□□ 0.23
TDP2-205ENST00000480495 HERC4Q5GLZ8 1057 aaPredicted RBP16.48■□□□□ 0.23
TDP2-205ENST00000480495 MPZL3Q6UWV2 235 aa16.48■□□□□ 0.23
TDP2-205ENST00000480495 GPBP1Q86WP2 473 aa16.48■□□□□ 0.23
TDP2-205ENST00000480495 RAD54LQ92698 747 aa16.48■□□□□ 0.23
TDP2-205ENST00000480495 RPGRIP1Q96KN7 1286 aa16.48■□□□□ 0.23
TDP2-205ENST00000480495 FBXL18Q96ME1 805 aa16.48■□□□□ 0.23
TDP2-205ENST00000480495 TARS2Q9BW92 718 aaKnown RBP16.48■□□□□ 0.23
TDP2-205ENST00000480495 GPR62Q9BZJ7 368 aa16.48■□□□□ 0.23
TDP2-205ENST00000480495 CDT1Q9H211 546 aa16.48■□□□□ 0.23
TDP2-205ENST00000480495 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.48■□□□□ 0.23
TDP2-205ENST00000480495 TOPORSQ9NS56 1045 aaPredicted RBP16.48■□□□□ 0.23
TDP2-205ENST00000480495 BLOC1S4Q9NUP1 217 aa16.48■□□□□ 0.23
TDP2-205ENST00000480495 DPP7Q9UHL4 492 aa16.48■□□□□ 0.23
TDP2-205ENST00000480495 MTMR6Q9Y217 621 aa16.48■□□□□ 0.23
TDP2-205ENST00000480495 SRPRBQ9Y5M8 271 aaKnown RBP16.48■□□□□ 0.23
TDP2-205ENST00000480495 MORC2Q9Y6X9 1032 aaPredicted RBP16.48■□□□□ 0.23
TDP2-205ENST00000480495 SF3B1O75533 1304 aaKnown RBP eCLIP16.47■□□□□ 0.23
TDP2-205ENST00000480495 NPHP3-ACAD11A0A0J9YXS1 232 aa16.47■□□□□ 0.23
TDP2-205ENST00000480495 CASTOR2A6NHX0 329 aa16.47■□□□□ 0.23
TDP2-205ENST00000480495 STX6O43752 255 aa16.47■□□□□ 0.23
TDP2-205ENST00000480495 C1RP00736 705 aa16.47■□□□□ 0.23
TDP2-205ENST00000480495 MAPTP10636 758 aaKnown RBP16.47■□□□□ 0.23
TDP2-205ENST00000480495 KARSQ15046 597 aaKnown RBP16.47■□□□□ 0.23
TDP2-205ENST00000480495 NAB2Q15742 525 aa16.47■□□□□ 0.23
TDP2-205ENST00000480495 RARS2Q5T160 578 aaKnown RBP16.47■□□□□ 0.23
TDP2-205ENST00000480495 ELMSAN1Q6PJG2 1045 aa16.47■□□□□ 0.23
TDP2-205ENST00000480495 KCNN1Q92952 543 aa16.47■□□□□ 0.23
TDP2-205ENST00000480495 TCHPQ9BT92 498 aa16.47■□□□□ 0.23
TDP2-205ENST00000480495 LRFN3Q9BTN0 628 aa16.47■□□□□ 0.23
TDP2-205ENST00000480495 SFXN1Q9H9B4 322 aa16.47■□□□□ 0.23
TDP2-205ENST00000480495 FOXD4L1Q9NU39 408 aa16.47■□□□□ 0.23
TDP2-205ENST00000480495 TDRD15B5MCY1 1934 aaKnown RBP16.47■□□□□ 0.23
TDP2-205ENST00000480495 ABLIM1O14639 778 aa16.46■□□□□ 0.23
TDP2-205ENST00000480495 TEX28O15482 410 aa16.46■□□□□ 0.23
TDP2-205ENST00000480495 TOM1L1O75674 476 aa16.46■□□□□ 0.23
TDP2-205ENST00000480495 COL9A1P20849 921 aa16.46■□□□□ 0.23
TDP2-205ENST00000480495 MARCKSP29966 332 aaPredicted RBP16.46■□□□□ 0.23
TDP2-205ENST00000480495 DDIT3P35638 169 aa16.46■□□□□ 0.23
TDP2-205ENST00000480495 NCKAP1LP55160 1127 aa16.46■□□□□ 0.23
TDP2-205ENST00000480495 ELAVL2Q12926 359 aaKnown RBP16.46■□□□□ 0.23
TDP2-205ENST00000480495 DHX8Q14562 1220 aaKnown RBP16.46■□□□□ 0.23
TDP2-205ENST00000480495 MCM6Q14566 821 aa16.46■□□□□ 0.23
TDP2-205ENST00000480495 XKR4Q5GH76 650 aa16.46■□□□□ 0.23
TDP2-205ENST00000480495 ATAT1Q5SQI0 421 aa16.46■□□□□ 0.23
TDP2-205ENST00000480495 ZPBP2Q6X784 338 aa16.46■□□□□ 0.23
TDP2-205ENST00000480495 C12orf76Q8N812 135 aaPredicted RBP16.46■□□□□ 0.23
TDP2-205ENST00000480495 LRRC15Q8TF66 581 aa16.46■□□□□ 0.23
TDP2-205ENST00000480495 LARP4BQ92615 738 aaKnown RBP16.46■□□□□ 0.23
TDP2-205ENST00000480495 RABGGTAQ92696 567 aa16.46■□□□□ 0.23
TDP2-205ENST00000480495 UROC1Q96N76 676 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms