RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 AGO4Q9HCK5 861 aaKnown RBP13.44□□□□□ -0.26
USP11-208ENST00000480104 TTC41PQ6P2S7 1318 aa13.43□□□□□ -0.26
USP11-208ENST00000480104 CNTNAP2Q9UHC6 1331 aa13.43□□□□□ -0.26
USP11-208ENST00000480104 SLC38A8A6NNN8 435 aa13.43□□□□□ -0.26
USP11-208ENST00000480104 ARNTLO00327 626 aa13.43□□□□□ -0.26
USP11-208ENST00000480104 DCLK1O15075 740 aa13.43□□□□□ -0.26
USP11-208ENST00000480104 RHOP08100 348 aa13.43□□□□□ -0.26
USP11-208ENST00000480104 RDXP35241 583 aaKnown RBP13.43□□□□□ -0.26
USP11-208ENST00000480104 DSC1Q08554 894 aa13.43□□□□□ -0.26
USP11-208ENST00000480104 PIP4P1Q86T03 277 aa13.43□□□□□ -0.26
USP11-208ENST00000480104 CLMPQ9H6B4 373 aa13.43□□□□□ -0.26
USP11-208ENST00000480104 LY9Q9HBG7 655 aa13.43□□□□□ -0.26
USP11-208ENST00000480104 CEP131Q9UPN4 1083 aa13.43□□□□□ -0.26
USP11-208ENST00000480104 PCDHB15Q9Y5E8 787 aa13.43□□□□□ -0.26
USP11-208ENST00000480104 MGAQ8IWI9 3026 aa13.43□□□□□ -0.26
USP11-208ENST00000480104 NCANO14594 1321 aa13.42□□□□□ -0.26
USP11-208ENST00000480104 ZNF862O60290 1169 aa13.42□□□□□ -0.26
USP11-208ENST00000480104 RHOBTB1O94844 696 aa13.42□□□□□ -0.26
USP11-208ENST00000480104 PSMC3P17980 439 aa13.42□□□□□ -0.26
USP11-208ENST00000480104 FAM193AP78312 1265 aa13.42□□□□□ -0.26
USP11-208ENST00000480104 SEC23AQ15436 765 aa13.42□□□□□ -0.26
USP11-208ENST00000480104 ZNF423Q2M1K9 1284 aa13.42□□□□□ -0.26
USP11-208ENST00000480104 MCMDC2Q4G0Z9 681 aa13.42□□□□□ -0.26
USP11-208ENST00000480104 RTP2Q5QGT7 225 aa13.42□□□□□ -0.26
USP11-208ENST00000480104 AXDND1Q5T1B0 1012 aaPredicted RBP13.42□□□□□ -0.26
USP11-208ENST00000480104 MIS18BP1Q6P0N0 1132 aa13.42□□□□□ -0.26
USP11-208ENST00000480104 MRPL10Q7Z7H8 261 aaKnown RBP13.42□□□□□ -0.26
USP11-208ENST00000480104 OTUD7AQ8TE49 926 aaPredicted RBP13.42□□□□□ -0.26
USP11-208ENST00000480104 MSANTD3Q96H12 275 aa13.42□□□□□ -0.26
USP11-208ENST00000480104 ASB16Q96NS5 453 aa13.42□□□□□ -0.26
USP11-208ENST00000480104 CLSTN3Q9BQT9 956 aa13.42□□□□□ -0.26
USP11-208ENST00000480104 SPDYE3A6NKU9 549 aa13.41□□□□□ -0.26
USP11-208ENST00000480104 ZNF213O14771 459 aa13.41□□□□□ -0.26
USP11-208ENST00000480104 ZNF263O14978 683 aa13.41□□□□□ -0.26
USP11-208ENST00000480104 MEFVO15553 781 aaPredicted RBP13.41□□□□□ -0.26
USP11-208ENST00000480104 ADAM12O43184 909 aa13.41□□□□□ -0.26
USP11-208ENST00000480104 KPNA1P52294 538 aaPredicted RBP13.41□□□□□ -0.26
USP11-208ENST00000480104 IRX4P78413 519 aa13.41□□□□□ -0.26
USP11-208ENST00000480104 SRSF1Q07955 248 aaKnown RBP eCLIP13.41□□□□□ -0.26
USP11-208ENST00000480104 DRP2Q13474 957 aa13.41□□□□□ -0.26
USP11-208ENST00000480104 CCINQ13939 588 aa13.41□□□□□ -0.26
USP11-208ENST00000480104 C1orf228Q6PIY5 440 aa13.41□□□□□ -0.26
USP11-208ENST00000480104 PSTPIP2Q9H939 334 aa13.41□□□□□ -0.26
USP11-208ENST00000480104 PCDHA6Q9UN73 950 aa13.41□□□□□ -0.26
USP11-208ENST00000480104 PCDHA8Q9Y5H6 950 aa13.41□□□□□ -0.26
USP11-208ENST00000480104 MAFBQ9Y5Q3 323 aaPredicted RBP13.41□□□□□ -0.26
USP11-208ENST00000480104 A0A087WZ62 844 aa13.4□□□□□ -0.26
USP11-208ENST00000480104 CCDC194A0A1B0GVG4 234 aa13.4□□□□□ -0.26
USP11-208ENST00000480104 CTHP32929 405 aa13.4□□□□□ -0.26
USP11-208ENST00000480104 VIPR2P41587 438 aa13.4□□□□□ -0.26
USP11-208ENST00000480104 MAPK8P45983 427 aa13.4□□□□□ -0.26
USP11-208ENST00000480104 MLLT6P55198 1093 aaPredicted RBP13.4□□□□□ -0.26
USP11-208ENST00000480104 PON2Q15165 354 aa13.4□□□□□ -0.26
USP11-208ENST00000480104 CCNI2Q6ZMN8 369 aaPredicted RBP13.4□□□□□ -0.26
USP11-208ENST00000480104 CATSPER4Q7RTX7 472 aa13.4□□□□□ -0.26
USP11-208ENST00000480104 CSGALNACT1Q8TDX6 532 aa13.4□□□□□ -0.26
USP11-208ENST00000480104 DEPDC1BQ8WUY9 529 aa13.4□□□□□ -0.26
USP11-208ENST00000480104 TCEAL4Q96EI5 215 aa13.4□□□□□ -0.26
USP11-208ENST00000480104 FDXACB1Q9BRP7 624 aaPredicted RBP13.4□□□□□ -0.26
USP11-208ENST00000480104 COLEC11Q9BWP8 271 aa13.4□□□□□ -0.26
USP11-208ENST00000480104 APOL6Q9BWW8 343 aa13.4□□□□□ -0.26
USP11-208ENST00000480104 ADAM28Q9UKQ2 775 aa13.4□□□□□ -0.26
USP11-208ENST00000480104 UBR5O95071 2799 aaPredicted RBP13.4□□□□□ -0.26
USP11-208ENST00000480104 ARL5CA6NH57 179 aa13.39□□□□□ -0.27
USP11-208ENST00000480104 SPECC1L-ADORA2AF8WAN1 911 aa13.39□□□□□ -0.27
USP11-208ENST00000480104 MAP3K13O43283 966 aa13.39□□□□□ -0.27
USP11-208ENST00000480104 NR1I2O75469 434 aa13.39□□□□□ -0.27
USP11-208ENST00000480104 SCNN1GP51170 649 aa13.39□□□□□ -0.27
USP11-208ENST00000480104 SEMA3BQ13214 749 aa13.39□□□□□ -0.27
USP11-208ENST00000480104 PSMD5Q16401 504 aa13.39□□□□□ -0.27
USP11-208ENST00000480104 CEP55Q53EZ4 464 aa13.39□□□□□ -0.27
USP11-208ENST00000480104 CYP2U1Q7Z449 544 aa13.39□□□□□ -0.27
USP11-208ENST00000480104 SYNPOQ8N3V7 929 aa13.39□□□□□ -0.27
USP11-208ENST00000480104 RABGGTAQ92696 567 aa13.39□□□□□ -0.27
USP11-208ENST00000480104 SMARCD2Q92925 531 aa13.39□□□□□ -0.27
USP11-208ENST00000480104 C8orf33Q9H7E9 229 aaPredicted RBP13.39□□□□□ -0.27
USP11-208ENST00000480104 AVENQ9NQS1 362 aaPredicted RBP13.39□□□□□ -0.27
USP11-208ENST00000480104 AGPAT5Q9NUQ2 364 aa13.39□□□□□ -0.27
USP11-208ENST00000480104 POLR3BQ9NW08 1133 aaPredicted RBP13.39□□□□□ -0.27
USP11-208ENST00000480104 SLC8A2Q9UPR5 921 aa13.39□□□□□ -0.27
USP11-208ENST00000480104 EML5Q05BV3 1969 aa13.39□□□□□ -0.27
USP11-208ENST00000480104 ABCA12Q86UK0 2595 aa13.39□□□□□ -0.27
USP11-208ENST00000480104 PTPRQQ9UMZ3 2332 aa13.38□□□□□ -0.27
USP11-208ENST00000480104 WDR27A2RRH5 827 aa13.38□□□□□ -0.27
USP11-208ENST00000480104 MYBPHLA2RUH7 354 aa13.38□□□□□ -0.27
USP11-208ENST00000480104 PYCARD-AS1I3L0S3 204 aa13.38□□□□□ -0.27
USP11-208ENST00000480104 GBP1P32455 592 aa13.38□□□□□ -0.27
USP11-208ENST00000480104 MLH1P40692 756 aa13.38□□□□□ -0.27
USP11-208ENST00000480104 KARSQ15046 597 aaKnown RBP13.38□□□□□ -0.27
USP11-208ENST00000480104 UVSSAQ2YD98 709 aa13.38□□□□□ -0.27
USP11-208ENST00000480104 PRSS36Q5K4E3 855 aa13.38□□□□□ -0.27
USP11-208ENST00000480104 UBXN11Q5T124 520 aa13.38□□□□□ -0.27
USP11-208ENST00000480104 FAM200AQ8TCP9 573 aa13.38□□□□□ -0.27
USP11-208ENST00000480104 FAM167AQ96KS9 214 aa13.38□□□□□ -0.27
USP11-208ENST00000480104 ZFP42Q96MM3 310 aa13.38□□□□□ -0.27
USP11-208ENST00000480104 ZSWIM3Q96MP5 696 aa13.38□□□□□ -0.27
USP11-208ENST00000480104 HHIPQ96QV1 700 aa13.38□□□□□ -0.27
USP11-208ENST00000480104 GAD1Q99259 594 aa13.38□□□□□ -0.27
USP11-208ENST00000480104 MIOSQ9NXC5 875 aa13.38□□□□□ -0.27
USP11-208ENST00000480104 DDX19BQ9UMR2 479 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms