RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 UBA7P41226 1012 aa11.62□□□□□ -0.55
CHD6-208ENST00000480022 MTFR1Q15390 333 aa11.62□□□□□ -0.55
CHD6-208ENST00000480022 ZC2HC1CQ53FD0 456 aaPredicted RBP11.62□□□□□ -0.55
CHD6-208ENST00000480022 FAM83BQ5T0W9 1011 aa11.62□□□□□ -0.55
CHD6-208ENST00000480022 PEX26Q7Z412 305 aa11.62□□□□□ -0.55
CHD6-208ENST00000480022 ANKRD42Q8N9B4 389 aa11.62□□□□□ -0.55
CHD6-208ENST00000480022 ZNF784Q8NCA9 323 aaPredicted RBP11.62□□□□□ -0.55
CHD6-208ENST00000480022 PPFIBP2Q8ND30 876 aa11.62□□□□□ -0.55
CHD6-208ENST00000480022 NR1H4Q96RI1 486 aaPredicted RBP11.62□□□□□ -0.55
CHD6-208ENST00000480022 CENPKQ9BS16 269 aa11.62□□□□□ -0.55
CHD6-208ENST00000480022 DHX36Q9H2U1 1008 aaKnown RBP11.62□□□□□ -0.55
CHD6-208ENST00000480022 SEMA4AQ9H3S1 761 aa11.62□□□□□ -0.55
CHD6-208ENST00000480022 COL2A1P02458 1487 aaPredicted RBP11.62□□□□□ -0.55
CHD6-208ENST00000480022 HNRNPRO43390 633 aaKnown RBP11.62□□□□□ -0.55
CHD6-208ENST00000480022 FCER1AP12319 257 aa11.62□□□□□ -0.55
CHD6-208ENST00000480022 POLGP54098 1239 aaPredicted RBP11.62□□□□□ -0.55
CHD6-208ENST00000480022 DR1Q01658 176 aa11.62□□□□□ -0.55
CHD6-208ENST00000480022 KLHL30Q0D2K2 578 aa11.62□□□□□ -0.55
CHD6-208ENST00000480022 CENPPQ6IPU0 288 aa11.62□□□□□ -0.55
CHD6-208ENST00000480022 SEPT14Q6ZU15 432 aa11.62□□□□□ -0.55
CHD6-208ENST00000480022 CACTIN-AS1Q8N1I8 211 aa11.62□□□□□ -0.55
CHD6-208ENST00000480022 GDAP1Q8TB36 358 aa11.62□□□□□ -0.55
CHD6-208ENST00000480022 GLIS2Q9BZE0 524 aaPredicted RBP11.62□□□□□ -0.55
CHD6-208ENST00000480022 TANGO6Q9C0B7 1094 aa11.62□□□□□ -0.55
CHD6-208ENST00000480022 KIAA1683Q9H0B3 1180 aa11.62□□□□□ -0.55
CHD6-208ENST00000480022 RANBP17Q9H2T7 1088 aaKnown RBP11.62□□□□□ -0.55
CHD6-208ENST00000480022 PPP2R3BQ9Y5P8 575 aa11.62□□□□□ -0.55
CHD6-208ENST00000480022 CYP1A1P04798 512 aaPredicted RBP11.61□□□□□ -0.55
CHD6-208ENST00000480022 SLURP2P0DP57 97 aa11.61□□□□□ -0.55
CHD6-208ENST00000480022 ASIC1P78348 528 aa11.61□□□□□ -0.55
CHD6-208ENST00000480022 PPP2R5EQ16537 467 aa11.61□□□□□ -0.55
CHD6-208ENST00000480022 PUS10Q3MIT2 529 aaKnown RBP11.61□□□□□ -0.55
CHD6-208ENST00000480022 LIN52Q52LA3 116 aa11.61□□□□□ -0.55
CHD6-208ENST00000480022 C10orf76Q5T2E6 689 aa11.61□□□□□ -0.55
CHD6-208ENST00000480022 FBXO25Q8TCJ0 367 aa11.61□□□□□ -0.55
CHD6-208ENST00000480022 SLC7A6OSQ96CW6 309 aaPredicted RBP11.61□□□□□ -0.55
CHD6-208ENST00000480022 CSRNP1Q96S65 589 aa11.61□□□□□ -0.55
CHD6-208ENST00000480022 MLXIPLQ9NP71 852 aa11.61□□□□□ -0.55
CHD6-208ENST00000480022 DDX60LQ5H9U9 1706 aaKnown RBP11.61□□□□□ -0.55
CHD6-208ENST00000480022 FAM187AA6NFU0 413 aa11.61□□□□□ -0.55
CHD6-208ENST00000480022 PP2D1A8MPX8 630 aa11.61□□□□□ -0.55
CHD6-208ENST00000480022 ZNF189O75820 626 aaPredicted RBP11.61□□□□□ -0.55
CHD6-208ENST00000480022 EIF4BP23588 611 aaKnown RBP11.61□□□□□ -0.55
CHD6-208ENST00000480022 MARK3P27448 753 aa11.61□□□□□ -0.55
CHD6-208ENST00000480022 PTENP60484 403 aa11.61□□□□□ -0.55
CHD6-208ENST00000480022 ARID5AQ03989 594 aa11.61□□□□□ -0.55
CHD6-208ENST00000480022 MAP7Q14244 749 aa11.61□□□□□ -0.55
CHD6-208ENST00000480022 RCN1Q15293 331 aa11.61□□□□□ -0.55
CHD6-208ENST00000480022 KHDC1Q4VXA5 237 aaKnown RBP11.61□□□□□ -0.55
CHD6-208ENST00000480022 NBPF12Q5TAG4 269 aaPredicted RBP11.61□□□□□ -0.55
CHD6-208ENST00000480022 CNNM4Q6P4Q7 775 aa11.61□□□□□ -0.55
CHD6-208ENST00000480022 VSTM1Q6UX27 236 aa11.61□□□□□ -0.55
CHD6-208ENST00000480022 ZDHHC24Q6UX98 284 aa11.61□□□□□ -0.55
CHD6-208ENST00000480022 DTHD1Q6ZMT9 781 aa11.61□□□□□ -0.55
CHD6-208ENST00000480022 LRRC74BQ6ZQY2 392 aa11.61□□□□□ -0.55
CHD6-208ENST00000480022 C4orf32Q8N8J7 132 aa11.61□□□□□ -0.55
CHD6-208ENST00000480022 NRG4Q8WWG1 115 aa11.61□□□□□ -0.55
CHD6-208ENST00000480022 ARHGEF2Q92974 986 aaKnown RBP11.61□□□□□ -0.55
CHD6-208ENST00000480022 DYNLL2Q96FJ2 89 aa11.61□□□□□ -0.55
CHD6-208ENST00000480022 ROPN1BQ9BZX4 212 aaPredicted RBP11.61□□□□□ -0.55
CHD6-208ENST00000480022 ROPN1Q9HAT0 212 aaPredicted RBP11.61□□□□□ -0.55
CHD6-208ENST00000480022 MAGEF1Q9HAY2 307 aa11.61□□□□□ -0.55
CHD6-208ENST00000480022 KCNK9Q9NPC2 374 aa11.61□□□□□ -0.55
CHD6-208ENST00000480022 SUCLA2Q9P2R7 463 aaPredicted RBP11.61□□□□□ -0.55
CHD6-208ENST00000480022 SNX24Q9Y343 169 aa11.61□□□□□ -0.55
CHD6-208ENST00000480022 STK24Q9Y6E0 443 aa11.61□□□□□ -0.55
CHD6-208ENST00000480022 HLA-DOAP06340 250 aa11.6□□□□□ -0.55
CHD6-208ENST00000480022 LYNP07948 512 aa11.6□□□□□ -0.55
CHD6-208ENST00000480022 UBTFL6P0CB48 400 aaPredicted RBP11.6□□□□□ -0.55
CHD6-208ENST00000480022 STX2P32856 288 aa11.6□□□□□ -0.55
CHD6-208ENST00000480022 YARSP54577 528 aaKnown RBP11.6□□□□□ -0.55
CHD6-208ENST00000480022 POLR2FP61218 127 aaKnown RBP11.6□□□□□ -0.55
CHD6-208ENST00000480022 FUT2Q10981 343 aa11.6□□□□□ -0.55
CHD6-208ENST00000480022 RAPGEF1Q13905 1077 aa11.6□□□□□ -0.55
CHD6-208ENST00000480022 GIT2Q14161 759 aa11.6□□□□□ -0.55
CHD6-208ENST00000480022 COBLL1Q53SF7 1204 aa11.6□□□□□ -0.55
CHD6-208ENST00000480022 KIAA1755Q5JYT7 1200 aa11.6□□□□□ -0.55
CHD6-208ENST00000480022 LRRC37BQ96QE4 947 aa11.6□□□□□ -0.55
CHD6-208ENST00000480022 TRIM9Q9C026 710 aa11.6□□□□□ -0.55
CHD6-208ENST00000480022 CCSER1Q9C0I3 900 aa11.6□□□□□ -0.55
CHD6-208ENST00000480022 PI4KBQ9UBF8 816 aa11.6□□□□□ -0.55
CHD6-208ENST00000480022 MTRF1LQ9UGC7 380 aaKnown RBP11.6□□□□□ -0.55
CHD6-208ENST00000480022 SYNPO2Q9UMS6 1093 aa11.6□□□□□ -0.55
CHD6-208ENST00000480022 WDR37Q9Y2I8 494 aa11.6□□□□□ -0.55
CHD6-208ENST00000480022 TMEM221A6NGB7 291 aa11.6□□□□□ -0.55
CHD6-208ENST00000480022 MAPK13O15264 365 aa11.6□□□□□ -0.55
CHD6-208ENST00000480022 RIPK2O43353 540 aa11.6□□□□□ -0.55
CHD6-208ENST00000480022 FGGP02679 453 aa11.6□□□□□ -0.55
CHD6-208ENST00000480022 ASLP04424 464 aa11.6□□□□□ -0.55
CHD6-208ENST00000480022 SPATA31D3P0C874 917 aa11.6□□□□□ -0.55
CHD6-208ENST00000480022 ATP5DP30049 168 aa11.6□□□□□ -0.55
CHD6-208ENST00000480022 DRG2P55039 364 aaKnown RBP11.6□□□□□ -0.55
CHD6-208ENST00000480022 ASIC2Q16515 512 aa11.6□□□□□ -0.55
CHD6-208ENST00000480022 UBAP2Q5T6F2 1119 aaKnown RBP11.6□□□□□ -0.55
CHD6-208ENST00000480022 SPATA31D4Q6ZUB0 917 aa11.6□□□□□ -0.55
CHD6-208ENST00000480022 OTUD6AQ7L8S5 288 aa11.6□□□□□ -0.55
CHD6-208ENST00000480022 TPCN2Q8NHX9 752 aa11.6□□□□□ -0.55
CHD6-208ENST00000480022 MAGEB18Q96M61 343 aa11.6□□□□□ -0.55
CHD6-208ENST00000480022 OLFM3Q96PB7 478 aa11.6□□□□□ -0.55
CHD6-208ENST00000480022 PITPNM3Q9BZ71 974 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms