RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 RHOT2Q8IXI1 618 aa14.02□□□□□ -0.17
SEC13-216ENST00000479868 CASKIN2Q8WXE0 1202 aa14.02□□□□□ -0.17
SEC13-216ENST00000479868 PSPC1Q8WXF1 523 aaKnown RBP14.02□□□□□ -0.17
SEC13-216ENST00000479868 IFT81Q8WYA0 676 aa14.02□□□□□ -0.17
SEC13-216ENST00000479868 CTTNBP2NLQ9P2B4 639 aa14.02□□□□□ -0.17
SEC13-216ENST00000479868 STYXL1Q9Y6J8 313 aa14.02□□□□□ -0.17
SEC13-216ENST00000479868 ATMINO43313 823 aaPredicted RBP14.01□□□□□ -0.17
SEC13-216ENST00000479868 GGPS1O95749 300 aa14.01□□□□□ -0.17
SEC13-216ENST00000479868 FAM153BP0C7A2 387 aa14.01□□□□□ -0.17
SEC13-216ENST00000479868 TCF7P36402 384 aaPredicted RBP14.01□□□□□ -0.17
SEC13-216ENST00000479868 TARBP2Q15633 366 aaKnown RBP14.01□□□□□ -0.17
SEC13-216ENST00000479868 KCTD19Q17RG1 926 aaPredicted RBP14.01□□□□□ -0.17
SEC13-216ENST00000479868 FAM153CQ494X1 144 aa14.01□□□□□ -0.17
SEC13-216ENST00000479868 CRELD2Q6UXH1 353 aaPredicted RBP14.01□□□□□ -0.17
SEC13-216ENST00000479868 C15orf39Q6ZRI6 1047 aa14.01□□□□□ -0.17
SEC13-216ENST00000479868 TSEN2Q8NCE0 465 aaKnown RBP14.01□□□□□ -0.17
SEC13-216ENST00000479868 DEPTORQ8TB45 409 aa14.01□□□□□ -0.17
SEC13-216ENST00000479868 CALR3Q96L12 384 aaKnown RBP14.01□□□□□ -0.17
SEC13-216ENST00000479868 DDX47Q9H0S4 455 aaKnown RBP14.01□□□□□ -0.17
SEC13-216ENST00000479868 FAM153AQ9UHL3 310 aa14.01□□□□□ -0.17
SEC13-216ENST00000479868 AGO2Q9UKV8 859 aaKnown RBP14.01□□□□□ -0.17
SEC13-216ENST00000479868 K7ERI5 159 aa14.01□□□□□ -0.17
SEC13-216ENST00000479868 KRIT1O00522 736 aa14.01□□□□□ -0.17
SEC13-216ENST00000479868 RNF40O75150 1001 aa14.01□□□□□ -0.17
SEC13-216ENST00000479868 ARIH2O95376 493 aa14.01□□□□□ -0.17
SEC13-216ENST00000479868 CALCAP01258 141 aa14.01□□□□□ -0.17
SEC13-216ENST00000479868 GZMAP12544 262 aa14.01□□□□□ -0.17
SEC13-216ENST00000479868 ABCD1P33897 745 aa14.01□□□□□ -0.17
SEC13-216ENST00000479868 STAT5BP51692 787 aa14.01□□□□□ -0.17
SEC13-216ENST00000479868 HADHBP55084 474 aaKnown RBP14.01□□□□□ -0.17
SEC13-216ENST00000479868 GPC5P78333 572 aa14.01□□□□□ -0.17
SEC13-216ENST00000479868 DRP2Q13474 957 aa14.01□□□□□ -0.17
SEC13-216ENST00000479868 NEDD9Q14511 834 aa14.01□□□□□ -0.17
SEC13-216ENST00000479868 Q3C1V9 767 aa14.01□□□□□ -0.17
SEC13-216ENST00000479868 ZBTB41Q5SVQ8 909 aa14.01□□□□□ -0.17
SEC13-216ENST00000479868 ANKRD13AQ8IZ07 590 aa14.01□□□□□ -0.17
SEC13-216ENST00000479868 CAVIN3Q969G5 261 aa14.01□□□□□ -0.17
SEC13-216ENST00000479868 FGD4Q96M96 766 aa14.01□□□□□ -0.17
SEC13-216ENST00000479868 TARS2Q9BW92 718 aaKnown RBP14.01□□□□□ -0.17
SEC13-216ENST00000479868 ZHX1Q9UKY1 873 aaPredicted RBP14.01□□□□□ -0.17
SEC13-216ENST00000479868 ALG6Q9Y672 507 aa14.01□□□□□ -0.17
SEC13-216ENST00000479868 MCM3APO60318 1980 aa14□□□□□ -0.17
SEC13-216ENST00000479868 PTPRJQ12913 1337 aa14□□□□□ -0.17
SEC13-216ENST00000479868 GOLGA6BA6NDN3 693 aa14□□□□□ -0.17
SEC13-216ENST00000479868 SPDYE5A6NIY4 337 aa14□□□□□ -0.17
SEC13-216ENST00000479868 SART1O43290 800 aaKnown RBP14□□□□□ -0.17
SEC13-216ENST00000479868 FGGP02679 453 aa14□□□□□ -0.17
SEC13-216ENST00000479868 PDE6CP51160 858 aa14□□□□□ -0.17
SEC13-216ENST00000479868 CLDN10P78369 228 aa14□□□□□ -0.17
SEC13-216ENST00000479868 ENPEPQ07075 957 aa14□□□□□ -0.17
SEC13-216ENST00000479868 PSMD6Q15008 389 aa14□□□□□ -0.17
SEC13-216ENST00000479868 METTL7BQ6UX53 244 aa14□□□□□ -0.17
SEC13-216ENST00000479868 DDX1Q92499 740 aaKnown RBP14□□□□□ -0.17
SEC13-216ENST00000479868 ALG3Q92685 438 aa14□□□□□ -0.17
SEC13-216ENST00000479868 KCNN1Q92952 543 aa14□□□□□ -0.17
SEC13-216ENST00000479868 CDCA5Q96FF9 252 aa14□□□□□ -0.17
SEC13-216ENST00000479868 KCNG1Q9UIX4 513 aa14□□□□□ -0.17
SEC13-216ENST00000479868 AGTPBP1Q9UPW5 1226 aa14□□□□□ -0.17
SEC13-216ENST00000479868 SOCS7O14512 581 aa14□□□□□ -0.17
SEC13-216ENST00000479868 CXCL11O14625 94 aa14□□□□□ -0.17
SEC13-216ENST00000479868 PIGRP01833 764 aa14□□□□□ -0.17
SEC13-216ENST00000479868 TGFB3P10600 412 aa14□□□□□ -0.17
SEC13-216ENST00000479868 TNNI1P19237 187 aa14□□□□□ -0.17
SEC13-216ENST00000479868 ERVK-9P63128 1117 aa14□□□□□ -0.17
SEC13-216ENST00000479868 CDR2Q01850 454 aa14□□□□□ -0.17
SEC13-216ENST00000479868 GCNT1Q02742 428 aa14□□□□□ -0.17
SEC13-216ENST00000479868 PAK2Q13177 524 aa14□□□□□ -0.17
SEC13-216ENST00000479868 CAPSQ13938 189 aa14□□□□□ -0.17
SEC13-216ENST00000479868 TTLL12Q14166 644 aaPredicted RBP14□□□□□ -0.17
SEC13-216ENST00000479868 TCEAL1Q15170 157 aa14□□□□□ -0.17
SEC13-216ENST00000479868 TDRD10Q5VZ19 366 aaKnown RBP14□□□□□ -0.17
SEC13-216ENST00000479868 AFAP1L1Q8TED9 768 aa14□□□□□ -0.17
SEC13-216ENST00000479868 UPF1Q92900 1129 aaKnown RBP eCLIP14□□□□□ -0.17
SEC13-216ENST00000479868 EXOC4Q96A65 974 aa14□□□□□ -0.17
SEC13-216ENST00000479868 FNBP1Q96RU3 617 aa14□□□□□ -0.17
SEC13-216ENST00000479868 SPON1Q9HCB6 807 aa14□□□□□ -0.17
SEC13-216ENST00000479868 KIAA1586Q9HCI6 787 aa14□□□□□ -0.17
SEC13-216ENST00000479868 NRBP2Q9NSY0 501 aa14□□□□□ -0.17
SEC13-216ENST00000479868 ANKFY1Q9P2R3 1169 aa14□□□□□ -0.17
SEC13-216ENST00000479868 RBPJLQ9UBG7 517 aa14□□□□□ -0.17
SEC13-216ENST00000479868 NR2E1Q9Y466 385 aa14□□□□□ -0.17
SEC13-216ENST00000479868 ERICH4A6NGS2 130 aa13.99□□□□□ -0.17
SEC13-216ENST00000479868 GRIN3BO60391 1043 aa13.99□□□□□ -0.17
SEC13-216ENST00000479868 KRT5P13647 590 aa13.99□□□□□ -0.17
SEC13-216ENST00000479868 RFC5P40937 340 aa13.99□□□□□ -0.17
SEC13-216ENST00000479868 MOGSQ13724 837 aa13.99□□□□□ -0.17
SEC13-216ENST00000479868 HSDL1Q3SXM5 330 aa13.99□□□□□ -0.17
SEC13-216ENST00000479868 ZACNQ401N2 412 aa13.99□□□□□ -0.17
SEC13-216ENST00000479868 FAM160B1Q5W0V3 765 aa13.99□□□□□ -0.17
SEC13-216ENST00000479868 TRIM50Q86XT4 487 aa13.99□□□□□ -0.17
SEC13-216ENST00000479868 SEPT1Q8WYJ6 367 aa13.99□□□□□ -0.17
SEC13-216ENST00000479868 TTC7AQ9ULT0 858 aaPredicted RBP13.99□□□□□ -0.17
SEC13-216ENST00000479868 KCNH4Q9UQ05 1017 aa13.99□□□□□ -0.17
SEC13-216ENST00000479868 TTLL13PA6NNM8 815 aa13.98□□□□□ -0.17
SEC13-216ENST00000479868 TMEM110-MUSTN1A8MSY1 372 aa13.98□□□□□ -0.17
SEC13-216ENST00000479868 CCDC188H7C350 402 aa13.98□□□□□ -0.17
SEC13-216ENST00000479868 C4BPAP04003 597 aaKnown RBP13.98□□□□□ -0.17
SEC13-216ENST00000479868 MARK3P27448 753 aa13.98□□□□□ -0.17
SEC13-216ENST00000479868 ZNF211Q13398 564 aaPredicted RBP13.98□□□□□ -0.17
SEC13-216ENST00000479868 NAA35Q5VZE5 725 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms