RNA–Protein interactions for RNA: ENST00000477605.1

CCM2-209, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 2,050 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-209ENST00000477605 CCDC114Q96M63 670 aa19.4■□□□□ 0.7
CCM2-209ENST00000477605 ZNF317Q96PQ6 595 aaPredicted RBP19.4■□□□□ 0.7
CCM2-209ENST00000477605 JAK3P52333 1124 aa19.4■□□□□ 0.7
CCM2-209ENST00000477605 DLGAP5Q15398 846 aa19.4■□□□□ 0.7
CCM2-209ENST00000477605 SIX1Q15475 284 aaPredicted RBP19.4■□□□□ 0.7
CCM2-209ENST00000477605 AADACL2Q6P093 401 aa19.4■□□□□ 0.7
CCM2-209ENST00000477605 ENOSF1Q7L5Y1 443 aa19.4■□□□□ 0.7
CCM2-209ENST00000477605 MAEAQ7L5Y9 396 aa19.4■□□□□ 0.7
CCM2-209ENST00000477605 ZDHHC14Q8IZN3 488 aa19.4■□□□□ 0.7
CCM2-209ENST00000477605 OSBPL7Q9BZF2 842 aa19.4■□□□□ 0.7
CCM2-209ENST00000477605 WHRNQ9P202 907 aa19.4■□□□□ 0.7
CCM2-209ENST00000477605 YDJCA8MPS7 323 aa19.39■□□□□ 0.69
CCM2-209ENST00000477605 TISP43B9A030 160 aa19.39■□□□□ 0.69
CCM2-209ENST00000477605 FSCN2O14926 492 aa19.39■□□□□ 0.69
CCM2-209ENST00000477605 CYP26A1O43174 497 aa19.39■□□□□ 0.69
CCM2-209ENST00000477605 RIPK2O43353 540 aa19.39■□□□□ 0.69
CCM2-209ENST00000477605 ECEL1O95672 775 aa19.39■□□□□ 0.69
CCM2-209ENST00000477605 CYP11B1P15538 503 aa19.39■□□□□ 0.69
CCM2-209ENST00000477605 CHN1P15882 459 aa19.39■□□□□ 0.69
CCM2-209ENST00000477605 MAN1A1P33908 653 aa19.39■□□□□ 0.69
CCM2-209ENST00000477605 PDE6CP51160 858 aa19.39■□□□□ 0.69
CCM2-209ENST00000477605 MNAT1P51948 309 aa19.39■□□□□ 0.69
CCM2-209ENST00000477605 PSMC5P62195 406 aa19.39■□□□□ 0.69
CCM2-209ENST00000477605 ITIH4Q14624 930 aa19.39■□□□□ 0.69
CCM2-209ENST00000477605 SPDYE2Q495Y8 402 aa19.39■□□□□ 0.69
CCM2-209ENST00000477605 ACAD10Q6JQN1 1059 aa19.39■□□□□ 0.69
CCM2-209ENST00000477605 ZNF746Q6NUN9 644 aaPredicted RBP19.39■□□□□ 0.69
CCM2-209ENST00000477605 RSBN1LQ6PCB5 846 aaPredicted RBP19.39■□□□□ 0.69
CCM2-209ENST00000477605 TAOK1Q7L7X3 1001 aa19.39■□□□□ 0.69
CCM2-209ENST00000477605 CCDC50Q8IVM0 306 aa19.39■□□□□ 0.69
CCM2-209ENST00000477605 PPM1KQ8N3J5 372 aa19.39■□□□□ 0.69
CCM2-209ENST00000477605 ANKS4BQ8N8V4 417 aa19.39■□□□□ 0.69
CCM2-209ENST00000477605 CCDC197Q8NCU1 140 aa19.39■□□□□ 0.69
CCM2-209ENST00000477605 ATXN2LQ8WWM7 1075 aaKnown RBP19.39■□□□□ 0.69
CCM2-209ENST00000477605 CLEC4DQ8WXI8 215 aa19.39■□□□□ 0.69
CCM2-209ENST00000477605 ZNF653Q96CK0 615 aa19.39■□□□□ 0.69
CCM2-209ENST00000477605 SEMA4AQ9H3S1 761 aa19.39■□□□□ 0.69
CCM2-209ENST00000477605 YY1AP1Q9H869 796 aa19.39■□□□□ 0.69
CCM2-209ENST00000477605 CNTNAP1P78357 1384 aa19.39■□□□□ 0.69
CCM2-209ENST00000477605 PHF20L1A8MW92 1017 aa19.39■□□□□ 0.69
CCM2-209ENST00000477605 MMEP08473 750 aa19.39■□□□□ 0.69
CCM2-209ENST00000477605 RARAP10276 462 aa19.39■□□□□ 0.69
CCM2-209ENST00000477605 SFNP31947 248 aa19.39■□□□□ 0.69
CCM2-209ENST00000477605 CALCOCO2Q13137 446 aa19.39■□□□□ 0.69
CCM2-209ENST00000477605 SNRNP35Q16560 246 aaKnown RBP19.39■□□□□ 0.69
CCM2-209ENST00000477605 MAP4K3Q8IVH8 894 aa19.39■□□□□ 0.69
CCM2-209ENST00000477605 HELQQ8TDG4 1101 aa19.39■□□□□ 0.69
CCM2-209ENST00000477605 PARD3BQ8TEW8 1205 aa19.39■□□□□ 0.69
CCM2-209ENST00000477605 CCT6BQ92526 530 aa19.39■□□□□ 0.69
CCM2-209ENST00000477605 KAT5Q92993 513 aa19.39■□□□□ 0.69
CCM2-209ENST00000477605 NT5C1BQ96P26 610 aa19.39■□□□□ 0.69
CCM2-209ENST00000477605 AZI2Q9H6S1 392 aa19.39■□□□□ 0.69
CCM2-209ENST00000477605 LRRC4CQ9HCJ2 640 aa19.39■□□□□ 0.69
CCM2-209ENST00000477605 KLC4Q9NSK0 619 aa19.39■□□□□ 0.69
CCM2-209ENST00000477605 TBX20Q9UMR3 447 aa19.39■□□□□ 0.69
CCM2-209ENST00000477605 PPIP5K2O43314 1243 aa19.38■□□□□ 0.69
CCM2-209ENST00000477605 ADRB2P07550 413 aa19.38■□□□□ 0.69
CCM2-209ENST00000477605 MTMR1Q13613 665 aa19.38■□□□□ 0.69
CCM2-209ENST00000477605 PIGWQ7Z7B1 504 aa19.38■□□□□ 0.69
CCM2-209ENST00000477605 FAM83AQ86UY5 434 aa19.38■□□□□ 0.69
CCM2-209ENST00000477605 SLC47A2Q86VL8 602 aa19.38■□□□□ 0.69
CCM2-209ENST00000477605 RDM1Q8NG50 284 aa19.38■□□□□ 0.69
CCM2-209ENST00000477605 MDM1Q8TC05 714 aa19.38■□□□□ 0.69
CCM2-209ENST00000477605 MFSD14AQ96MC6 490 aa19.38■□□□□ 0.69
CCM2-209ENST00000477605 AGBL1Q96MI9 1066 aa19.38■□□□□ 0.69
CCM2-209ENST00000477605 ADAM7Q9H2U9 754 aa19.38■□□□□ 0.69
CCM2-209ENST00000477605 C17orf75Q9HAS0 396 aa19.38■□□□□ 0.69
CCM2-209ENST00000477605 FBXO28Q9NVF7 368 aa19.38■□□□□ 0.69
CCM2-209ENST00000477605 COL20A1Q9P218 1284 aa19.38■□□□□ 0.69
CCM2-209ENST00000477605 TLDC2A0PJX2 215 aa19.37■□□□□ 0.69
CCM2-209ENST00000477605 RASGRF2O14827 1237 aa19.37■□□□□ 0.69
CCM2-209ENST00000477605 SLC16A4O15374 487 aa19.37■□□□□ 0.69
CCM2-209ENST00000477605 ZC3H11AO75152 810 aaKnown RBP eCLIP19.37■□□□□ 0.69
CCM2-209ENST00000477605 ASNSP08243 561 aa19.37■□□□□ 0.69
CCM2-209ENST00000477605 PEX3P56589 373 aa19.37■□□□□ 0.69
CCM2-209ENST00000477605 MAP3K10Q02779 954 aa19.37■□□□□ 0.69
CCM2-209ENST00000477605 ZNF568Q3ZCX4 644 aa19.37■□□□□ 0.69
CCM2-209ENST00000477605 MIGA2Q7L4E1 593 aa19.37■□□□□ 0.69
CCM2-209ENST00000477605 FBXL13Q8NEE6 735 aa19.37■□□□□ 0.69
CCM2-209ENST00000477605 SPIRE2Q8WWL2 714 aa19.37■□□□□ 0.69
CCM2-209ENST00000477605 PSPC1Q8WXF1 523 aaKnown RBP19.37■□□□□ 0.69
CCM2-209ENST00000477605 FBXL18Q96ME1 805 aa19.37■□□□□ 0.69
CCM2-209ENST00000477605 SLC40A1Q9NP59 571 aa19.37■□□□□ 0.69
CCM2-209ENST00000477605 INTS9Q9NV88 658 aaKnown RBP19.37■□□□□ 0.69
CCM2-209ENST00000477605 ASTN2O75129 1339 aaPredicted RBP19.37■□□□□ 0.69
CCM2-209ENST00000477605 ITIH2P19823 946 aa19.37■□□□□ 0.69
CCM2-209ENST00000477605 MAP2K1Q02750 393 aaPredicted RBP19.37■□□□□ 0.69
CCM2-209ENST00000477605 CAV1Q03135 178 aa19.37■□□□□ 0.69
CCM2-209ENST00000477605 DALRD3Q5D0E6 543 aaKnown RBP19.37■□□□□ 0.69
CCM2-209ENST00000477605 RNF207Q6ZRF8 634 aa19.37■□□□□ 0.69
CCM2-209ENST00000477605 SEMA4DQ92854 862 aa19.37■□□□□ 0.69
CCM2-209ENST00000477605 TRIM11Q96F44 468 aa19.37■□□□□ 0.69
CCM2-209ENST00000477605 GMLQ99445 158 aa19.37■□□□□ 0.69
CCM2-209ENST00000477605 SELENOSQ9BQE4 189 aa19.37■□□□□ 0.69
CCM2-209ENST00000477605 NTPCRQ9BSD7 190 aaKnown RBP19.37■□□□□ 0.69
CCM2-209ENST00000477605 NSRP1Q9H0G5 558 aaKnown RBP19.37■□□□□ 0.69
CCM2-209ENST00000477605 AVENQ9NQS1 362 aaPredicted RBP19.37■□□□□ 0.69
CCM2-209ENST00000477605 CLRN2A0PK11 232 aa19.36■□□□□ 0.69
CCM2-209ENST00000477605 CHUKO15111 745 aa19.36■□□□□ 0.69
CCM2-209ENST00000477605 DNAJC8O75937 253 aaPredicted RBP19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms