RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 TRPC7Q9HCX4 862 aa13.51□□□□□ -0.25
RTFDC1-207ENST00000477573 KCNQ5Q9NR82 932 aa13.51□□□□□ -0.25
RTFDC1-207ENST00000477573 MTMR4Q9NYA4 1195 aa13.51□□□□□ -0.25
RTFDC1-207ENST00000477573 PCDHB6Q9Y5E3 794 aa13.51□□□□□ -0.25
RTFDC1-207ENST00000477573 CAPN6Q9Y6Q1 641 aa13.51□□□□□ -0.25
RTFDC1-207ENST00000477573 PASKQ96RG2 1323 aa13.51□□□□□ -0.25
RTFDC1-207ENST00000477573 RELAQ04206 551 aa13.51□□□□□ -0.25
RTFDC1-207ENST00000477573 CUL1Q13616 776 aa13.51□□□□□ -0.25
RTFDC1-207ENST00000477573 MORC3Q14149 939 aa13.51□□□□□ -0.25
RTFDC1-207ENST00000477573 SPDYCQ5MJ68 293 aa13.51□□□□□ -0.25
RTFDC1-207ENST00000477573 CDKAL1Q5VV42 579 aa13.51□□□□□ -0.25
RTFDC1-207ENST00000477573 CABP7Q86V35 215 aa13.51□□□□□ -0.25
RTFDC1-207ENST00000477573 TREML1Q86YW5 311 aa13.51□□□□□ -0.25
RTFDC1-207ENST00000477573 NELFBQ8WX92 580 aa13.51□□□□□ -0.25
RTFDC1-207ENST00000477573 UTP4Q969X6 686 aaKnown RBP13.51□□□□□ -0.25
RTFDC1-207ENST00000477573 CCDC17Q96LX7 622 aa13.51□□□□□ -0.25
RTFDC1-207ENST00000477573 NUP88Q99567 741 aaPredicted RBP13.51□□□□□ -0.25
RTFDC1-207ENST00000477573 KCNH3Q9ULD8 1083 aa13.51□□□□□ -0.25
RTFDC1-207ENST00000477573 MTMR7Q9Y216 660 aa13.51□□□□□ -0.25
RTFDC1-207ENST00000477573 HBS1LQ9Y450 684 aaKnown RBP13.51□□□□□ -0.25
RTFDC1-207ENST00000477573 NUMBLQ9Y6R0 609 aa13.51□□□□□ -0.25
RTFDC1-207ENST00000477573 OXSR1O95747 527 aaPredicted RBP13.5□□□□□ -0.25
RTFDC1-207ENST00000477573 CDK4P11802 303 aa13.5□□□□□ -0.25
RTFDC1-207ENST00000477573 CYLC1P35663 651 aaPredicted RBP13.5□□□□□ -0.25
RTFDC1-207ENST00000477573 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.5□□□□□ -0.25
RTFDC1-207ENST00000477573 B3GNT6Q6ZMB0 384 aa13.5□□□□□ -0.25
RTFDC1-207ENST00000477573 NLRP9Q7RTR0 991 aa13.5□□□□□ -0.25
RTFDC1-207ENST00000477573 DEFB132Q7Z7B7 95 aa13.5□□□□□ -0.25
RTFDC1-207ENST00000477573 PATL1Q86TB9 770 aaKnown RBP13.5□□□□□ -0.25
RTFDC1-207ENST00000477573 BLIDQ8IZY5 108 aa13.5□□□□□ -0.25
RTFDC1-207ENST00000477573 CYP4X1Q8N118 509 aa13.5□□□□□ -0.25
RTFDC1-207ENST00000477573 ESX1Q8N693 406 aa13.5□□□□□ -0.25
RTFDC1-207ENST00000477573 SCG3Q8WXD2 468 aaKnown RBP13.5□□□□□ -0.25
RTFDC1-207ENST00000477573 USP6NLQ92738 828 aa13.5□□□□□ -0.25
RTFDC1-207ENST00000477573 SHISA4Q96DD7 197 aa13.5□□□□□ -0.25
RTFDC1-207ENST00000477573 IDI2Q9BXS1 227 aa13.5□□□□□ -0.25
RTFDC1-207ENST00000477573 RPAP3Q9H6T3 665 aaPredicted RBP13.5□□□□□ -0.25
RTFDC1-207ENST00000477573 SEC63Q9UGP8 760 aaKnown RBP13.5□□□□□ -0.25
RTFDC1-207ENST00000477573 FBXO2Q9UK22 296 aaPredicted RBP13.5□□□□□ -0.25
RTFDC1-207ENST00000477573 MAN1B1Q9UKM7 699 aa13.5□□□□□ -0.25
RTFDC1-207ENST00000477573 MTUS1Q9ULD2 1270 aa13.5□□□□□ -0.25
RTFDC1-207ENST00000477573 PCDHA4Q9UN74 947 aa13.5□□□□□ -0.25
RTFDC1-207ENST00000477573 ARL2BPQ9Y2Y0 163 aa13.5□□□□□ -0.25
RTFDC1-207ENST00000477573 SCN9AQ15858 1988 aa13.5□□□□□ -0.25
RTFDC1-207ENST00000477573 FBP2O00757 339 aa13.49□□□□□ -0.25
RTFDC1-207ENST00000477573 SPTLC1O15269 473 aa13.49□□□□□ -0.25
RTFDC1-207ENST00000477573 FGFR1OPO95684 399 aaKnown RBP13.49□□□□□ -0.25
RTFDC1-207ENST00000477573 TTLL1O95922 423 aa13.49□□□□□ -0.25
RTFDC1-207ENST00000477573 MMP13P45452 471 aa13.49□□□□□ -0.25
RTFDC1-207ENST00000477573 GALK1P51570 392 aa13.49□□□□□ -0.25
RTFDC1-207ENST00000477573 NPY5RQ15761 445 aa13.49□□□□□ -0.25
RTFDC1-207ENST00000477573 TTC38Q5R3I4 469 aa13.49□□□□□ -0.25
RTFDC1-207ENST00000477573 SNX30Q5VWJ9 437 aa13.49□□□□□ -0.25
RTFDC1-207ENST00000477573 CCSAPQ6IQ19 270 aaPredicted RBP13.49□□□□□ -0.25
RTFDC1-207ENST00000477573 TRIM67Q6ZTA4 783 aa13.49□□□□□ -0.25
RTFDC1-207ENST00000477573 TNFRSF25Q93038 417 aa13.49□□□□□ -0.25
RTFDC1-207ENST00000477573 DGCR14Q96DF8 476 aaKnown RBP13.49□□□□□ -0.25
RTFDC1-207ENST00000477573 CENPOQ9BU64 300 aa13.49□□□□□ -0.25
RTFDC1-207ENST00000477573 NDEL1Q9GZM8 345 aa13.49□□□□□ -0.25
RTFDC1-207ENST00000477573 VPS33BQ9H267 617 aa13.49□□□□□ -0.25
RTFDC1-207ENST00000477573 GINM1Q9NU53 330 aa13.49□□□□□ -0.25
RTFDC1-207ENST00000477573 ETS2P15036 469 aa13.49□□□□□ -0.25
RTFDC1-207ENST00000477573 PTPN2P17706 415 aa13.49□□□□□ -0.25
RTFDC1-207ENST00000477573 ARFIP2P53365 341 aa13.49□□□□□ -0.25
RTFDC1-207ENST00000477573 TRIM71Q2Q1W2 868 aaKnown RBP13.49□□□□□ -0.25
RTFDC1-207ENST00000477573 ZCWPW2Q504Y3 356 aa13.49□□□□□ -0.25
RTFDC1-207ENST00000477573 ASPRV1Q53RT3 343 aa13.49□□□□□ -0.25
RTFDC1-207ENST00000477573 IL23RQ5VWK5 629 aa13.49□□□□□ -0.25
RTFDC1-207ENST00000477573 HEATR3Q7Z4Q2 680 aa13.49□□□□□ -0.25
RTFDC1-207ENST00000477573 FOXP4Q8IVH2 680 aaPredicted RBP13.49□□□□□ -0.25
RTFDC1-207ENST00000477573 RIBC1Q8N443 379 aaPredicted RBP13.49□□□□□ -0.25
RTFDC1-207ENST00000477573 FAM13CQ8NE31 585 aa13.49□□□□□ -0.25
RTFDC1-207ENST00000477573 ZNF184Q99676 751 aaPredicted RBP13.49□□□□□ -0.25
RTFDC1-207ENST00000477573 FHDC1Q9C0D6 1143 aaPredicted RBP13.49□□□□□ -0.25
RTFDC1-207ENST00000477573 ETNK1Q9HBU6 452 aa13.49□□□□□ -0.25
RTFDC1-207ENST00000477573 BARHL2Q9NY43 387 aa13.49□□□□□ -0.25
RTFDC1-207ENST00000477573 PI4KBQ9UBF8 816 aa13.49□□□□□ -0.25
RTFDC1-207ENST00000477573 IGKV6D-41A0A0C4DH26 115 aa13.48□□□□□ -0.25
RTFDC1-207ENST00000477573 UNCXA6NJT0 531 aa13.48□□□□□ -0.25
RTFDC1-207ENST00000477573 TNFRSF10AO00220 468 aa13.48□□□□□ -0.25
RTFDC1-207ENST00000477573 PIM1P11309 404 aaPredicted RBP13.48□□□□□ -0.25
RTFDC1-207ENST00000477573 AKR1B1P15121 316 aa13.48□□□□□ -0.25
RTFDC1-207ENST00000477573 CHN1P15882 459 aa13.48□□□□□ -0.25
RTFDC1-207ENST00000477573 MDM2Q00987 491 aaPredicted RBP13.48□□□□□ -0.25
RTFDC1-207ENST00000477573 NFIAQ12857 509 aa13.48□□□□□ -0.25
RTFDC1-207ENST00000477573 CCDC6Q16204 474 aa13.48□□□□□ -0.25
RTFDC1-207ENST00000477573 CFAP221Q4G0U5 840 aa13.48□□□□□ -0.25
RTFDC1-207ENST00000477573 LRRC8BQ6P9F7 803 aa13.48□□□□□ -0.25
RTFDC1-207ENST00000477573 C14orf80Q86SX3 495 aa13.48□□□□□ -0.25
RTFDC1-207ENST00000477573 ZNF713Q8N859 430 aaPredicted RBP13.48□□□□□ -0.25
RTFDC1-207ENST00000477573 DAGLBQ8NCG7 672 aa13.48□□□□□ -0.25
RTFDC1-207ENST00000477573 CASKIN2Q8WXE0 1202 aa13.48□□□□□ -0.25
RTFDC1-207ENST00000477573 STARD8Q92502 1023 aa13.48□□□□□ -0.25
RTFDC1-207ENST00000477573 DNAJC7Q99615 494 aa13.48□□□□□ -0.25
RTFDC1-207ENST00000477573 ISCUQ9H1K1 167 aa13.48□□□□□ -0.25
RTFDC1-207ENST00000477573 C6orf203Q9P0P8 240 aaPredicted RBP13.48□□□□□ -0.25
RTFDC1-207ENST00000477573 ADAMTSL1Q8N6G6 1762 aa13.48□□□□□ -0.25
RTFDC1-207ENST00000477573 hCG_1984214I3L0E3 225 aa13.48□□□□□ -0.25
RTFDC1-207ENST00000477573 AFPP02771 609 aaKnown RBP13.48□□□□□ -0.25
RTFDC1-207ENST00000477573 GM2AP17900 193 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms