RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-208ENST00000477289 GTF2IRD2Q86UP8 949 aa5.29□□□□□ -1.56
NSMCE4A-208ENST00000477289 TRIM59Q8IWR1 403 aa5.29□□□□□ -1.56
NSMCE4A-208ENST00000477289 FRS2Q8WU20 508 aa5.29□□□□□ -1.56
NSMCE4A-208ENST00000477289 SDR42E1Q8WUS8 393 aa5.29□□□□□ -1.56
NSMCE4A-208ENST00000477289 CPLX3Q8WVH0 158 aa5.29□□□□□ -1.56
NSMCE4A-208ENST00000477289 OSBP2Q969R2 916 aa5.29□□□□□ -1.56
NSMCE4A-208ENST00000477289 CCDC17Q96LX7 622 aa5.29□□□□□ -1.56
NSMCE4A-208ENST00000477289 WRNIP1Q96S55 665 aa5.29□□□□□ -1.56
NSMCE4A-208ENST00000477289 STRBPQ96SI9 672 aaKnown RBP5.29□□□□□ -1.56
NSMCE4A-208ENST00000477289 RBM15Q96T37 977 aaKnown RBP eCLIP5.29□□□□□ -1.56
NSMCE4A-208ENST00000477289 APBA2Q99767 749 aa5.29□□□□□ -1.56
NSMCE4A-208ENST00000477289 RIOK1Q9BRS2 568 aaKnown RBP5.29□□□□□ -1.56
NSMCE4A-208ENST00000477289 KRTAP3-1Q9BYR8 98 aa5.29□□□□□ -1.56
NSMCE4A-208ENST00000477289 TMEM39BQ9GZU3 492 aa5.29□□□□□ -1.56
NSMCE4A-208ENST00000477289 PUS7LQ9H0K6 701 aaKnown RBP5.29□□□□□ -1.56
NSMCE4A-208ENST00000477289 ACBD3Q9H3P7 528 aa5.29□□□□□ -1.56
NSMCE4A-208ENST00000477289 SH2D4AQ9H788 454 aa5.29□□□□□ -1.56
NSMCE4A-208ENST00000477289 MARCH2Q9P0N8 246 aa5.29□□□□□ -1.56
NSMCE4A-208ENST00000477289 NTMQ9P121 344 aa5.29□□□□□ -1.56
NSMCE4A-208ENST00000477289 KIAA1522Q9P206 1035 aaPredicted RBP5.29□□□□□ -1.56
NSMCE4A-208ENST00000477289 PCDHAC2Q9Y5I4 1007 aa5.29□□□□□ -1.56
NSMCE4A-208ENST00000477289 AK9Q5TCS8 1911 aa5.29□□□□□ -1.56
NSMCE4A-208ENST00000477289 ASTN2O75129 1339 aaPredicted RBP5.28□□□□□ -1.56
NSMCE4A-208ENST00000477289 ERICH2A1L162 156 aa5.28□□□□□ -1.56
NSMCE4A-208ENST00000477289 TSPY2A6NKD2 308 aa5.28□□□□□ -1.56
NSMCE4A-208ENST00000477289 M0R2C6 588 aa5.28□□□□□ -1.56
NSMCE4A-208ENST00000477289 TRAF5O00463 557 aa5.28□□□□□ -1.56
NSMCE4A-208ENST00000477289 CTNND1O60716 968 aaKnown RBP5.28□□□□□ -1.56
NSMCE4A-208ENST00000477289 ASNSP08243 561 aa5.28□□□□□ -1.56
NSMCE4A-208ENST00000477289 GSPT1P15170 499 aaKnown RBP5.28□□□□□ -1.56
NSMCE4A-208ENST00000477289 HSPA6P17066 643 aa5.28□□□□□ -1.56
NSMCE4A-208ENST00000477289 ZNF143P52747 638 aaPredicted RBP5.28□□□□□ -1.56
NSMCE4A-208ENST00000477289 HMGA2P52926 109 aa5.28□□□□□ -1.56
NSMCE4A-208ENST00000477289 GJA9P57773 515 aa5.28□□□□□ -1.56
NSMCE4A-208ENST00000477289 SREBF2Q12772 1141 aa5.28□□□□□ -1.56
NSMCE4A-208ENST00000477289 SART3Q15020 963 aaKnown RBP5.28□□□□□ -1.56
NSMCE4A-208ENST00000477289 CERKLQ49MI3 558 aaPredicted RBP5.28□□□□□ -1.56
NSMCE4A-208ENST00000477289 SBK1Q52WX2 424 aa5.28□□□□□ -1.56
NSMCE4A-208ENST00000477289 PRAMEF18Q5VWM3 479 aa5.28□□□□□ -1.56
NSMCE4A-208ENST00000477289 MFSD6Q6ZSS7 791 aa5.28□□□□□ -1.56
NSMCE4A-208ENST00000477289 MIGA2Q7L4E1 593 aa5.28□□□□□ -1.56
NSMCE4A-208ENST00000477289 RALYLQ86SE5 291 aaKnown RBP5.28□□□□□ -1.56
NSMCE4A-208ENST00000477289 ADGRA1Q86SQ6 560 aa5.28□□□□□ -1.56
NSMCE4A-208ENST00000477289 MIB1Q86YT6 1006 aa5.28□□□□□ -1.56
NSMCE4A-208ENST00000477289 DCP2Q8IU60 420 aaKnown RBP5.28□□□□□ -1.56
NSMCE4A-208ENST00000477289 TEX2Q8IWB9 1127 aa5.28□□□□□ -1.56
NSMCE4A-208ENST00000477289 IFNL3Q8IZI9 196 aa5.28□□□□□ -1.56
NSMCE4A-208ENST00000477289 FAM26EQ8N5C1 309 aa5.28□□□□□ -1.56
NSMCE4A-208ENST00000477289 NPLOC4Q8TAT6 608 aa5.28□□□□□ -1.56
NSMCE4A-208ENST00000477289 MRRFQ96E11 262 aaKnown RBP5.28□□□□□ -1.56
NSMCE4A-208ENST00000477289 FAM227BQ96M60 508 aa5.28□□□□□ -1.56
NSMCE4A-208ENST00000477289 KRT23Q9C075 422 aa5.28□□□□□ -1.56
NSMCE4A-208ENST00000477289 SCAND2PQ9GZW5 306 aaPredicted RBP5.28□□□□□ -1.56
NSMCE4A-208ENST00000477289 CYP26B1Q9NR63 512 aa5.28□□□□□ -1.56
NSMCE4A-208ENST00000477289 AKAP11Q9UKA4 1901 aa5.28□□□□□ -1.56
NSMCE4A-208ENST00000477289 PASKQ96RG2 1323 aa5.27□□□□□ -1.57
NSMCE4A-208ENST00000477289 COL2A1P02458 1487 aaPredicted RBP5.27□□□□□ -1.57
NSMCE4A-208ENST00000477289 A0A0D9SFI3 127 aa5.27□□□□□ -1.57
NSMCE4A-208ENST00000477289 DDTLA6NHG4 134 aaPredicted RBP5.27□□□□□ -1.57
NSMCE4A-208ENST00000477289 GSG1L2A8MUP6 293 aa5.27□□□□□ -1.57
NSMCE4A-208ENST00000477289 UBE2Q2LH0YL09 131 aa5.27□□□□□ -1.57
NSMCE4A-208ENST00000477289 PRKAB2O43741 272 aa5.27□□□□□ -1.57
NSMCE4A-208ENST00000477289 TSPY3P0CV98 308 aa5.27□□□□□ -1.57
NSMCE4A-208ENST00000477289 TSPY8P0CW00 308 aa5.27□□□□□ -1.57
NSMCE4A-208ENST00000477289 CYP2C8P10632 490 aa5.27□□□□□ -1.57
NSMCE4A-208ENST00000477289 HSPD1P10809 573 aaKnown RBP5.27□□□□□ -1.57
NSMCE4A-208ENST00000477289 THBS2P35442 1172 aa5.27□□□□□ -1.57
NSMCE4A-208ENST00000477289 INHBEP58166 350 aa5.27□□□□□ -1.57
NSMCE4A-208ENST00000477289 PPARAQ07869 468 aa5.27□□□□□ -1.57
NSMCE4A-208ENST00000477289 NOGQ13253 232 aa5.27□□□□□ -1.57
NSMCE4A-208ENST00000477289 PABPC4Q13310 644 aaKnown RBP eCLIP5.27□□□□□ -1.572e-7■■■■■ 32.3
NSMCE4A-208ENST00000477289 KRT32Q14532 448 aa5.27□□□□□ -1.57
NSMCE4A-208ENST00000477289 ALX1Q15699 326 aa5.27□□□□□ -1.57
NSMCE4A-208ENST00000477289 ABCB5Q2M3G0 1257 aa5.27□□□□□ -1.57
NSMCE4A-208ENST00000477289 SLC4A8Q2Y0W8 1093 aa5.27□□□□□ -1.57
NSMCE4A-208ENST00000477289 RRP12Q5JTH9 1297 aaKnown RBP5.27□□□□□ -1.57
NSMCE4A-208ENST00000477289 C12orf60Q5U649 245 aa5.27□□□□□ -1.57
NSMCE4A-208ENST00000477289 RGMBQ6NW40 437 aa5.27□□□□□ -1.57
NSMCE4A-208ENST00000477289 CTR9Q6PD62 1173 aa5.27□□□□□ -1.57
NSMCE4A-208ENST00000477289 POMZP3Q6PJE2 187 aa5.27□□□□□ -1.57
NSMCE4A-208ENST00000477289 CCDC129Q6ZRS4 1044 aa5.27□□□□□ -1.57
NSMCE4A-208ENST00000477289 IQCA1Q86XH1 822 aa5.27□□□□□ -1.57
NSMCE4A-208ENST00000477289 ERO1BQ86YB8 467 aa5.27□□□□□ -1.57
NSMCE4A-208ENST00000477289 ADAMTS17Q8TE56 1095 aa5.27□□□□□ -1.57
NSMCE4A-208ENST00000477289 ZNF384Q8TF68 577 aa5.27□□□□□ -1.57
NSMCE4A-208ENST00000477289 ESR2Q92731 530 aa5.27□□□□□ -1.57
NSMCE4A-208ENST00000477289 ANAPC16Q96DE5 110 aa5.27□□□□□ -1.57
NSMCE4A-208ENST00000477289 SEC62Q99442 399 aaKnown RBP5.27□□□□□ -1.57
NSMCE4A-208ENST00000477289 FEZ1Q99689 392 aa5.27□□□□□ -1.57
NSMCE4A-208ENST00000477289 C11orf84Q9BUA3 381 aaPredicted RBP5.27□□□□□ -1.57
NSMCE4A-208ENST00000477289 MENTQ9BUN1 341 aa5.27□□□□□ -1.57
NSMCE4A-208ENST00000477289 TGIF2Q9GZN2 237 aa5.27□□□□□ -1.57
NSMCE4A-208ENST00000477289 NKX2-4Q9H2Z4 354 aa5.27□□□□□ -1.57
NSMCE4A-208ENST00000477289 DDX4Q9NQI0 724 aaKnown RBP5.27□□□□□ -1.57
NSMCE4A-208ENST00000477289 TMOD4Q9NZQ9 345 aa5.27□□□□□ -1.57
NSMCE4A-208ENST00000477289 TMEFF2Q9UIK5 374 aaPredicted RBP5.27□□□□□ -1.57
NSMCE4A-208ENST00000477289 SCAF8Q9UPN6 1271 aaKnown RBP5.27□□□□□ -1.57
NSMCE4A-208ENST00000477289 CTDP1Q9Y5B0 961 aaPredicted RBP5.27□□□□□ -1.57
NSMCE4A-208ENST00000477289 ECM29Q5VYK3 1845 aa5.27□□□□□ -1.57
NSMCE4A-208ENST00000477289 CNTNAP1P78357 1384 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms