RNA–Protein interactions for RNA: ENST00000476494.1

CLDN4-205, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-205ENST00000476494 SMC3Q9UQE7 1217 aa7.29□□□□□ -1.24
CLDN4-205ENST00000476494 GINS2Q9Y248 185 aa7.29□□□□□ -1.24
CLDN4-205ENST00000476494 PDCD11Q14690 1871 aaKnown RBP7.29□□□□□ -1.24
CLDN4-205ENST00000476494 CREBBPQ92793 2442 aa7.29□□□□□ -1.24
CLDN4-205ENST00000476494 UPK3BL1B0FP48 263 aa7.28□□□□□ -1.24
CLDN4-205ENST00000476494 UPK3BL2E5RIL1 263 aa7.28□□□□□ -1.24
CLDN4-205ENST00000476494 ARNTLO00327 626 aa7.28□□□□□ -1.24
CLDN4-205ENST00000476494 CPLX1O14810 134 aa7.28□□□□□ -1.24
CLDN4-205ENST00000476494 MEFVO15553 781 aaPredicted RBP7.28□□□□□ -1.24
CLDN4-205ENST00000476494 GAS2O43903 313 aaKnown RBP7.28□□□□□ -1.24
CLDN4-205ENST00000476494 AKAP3O75969 853 aa7.28□□□□□ -1.24
CLDN4-205ENST00000476494 DDAH1O94760 285 aa7.28□□□□□ -1.24
CLDN4-205ENST00000476494 DDHD2O94830 711 aa7.28□□□□□ -1.24
CLDN4-205ENST00000476494 CAVIN2O95810 425 aa7.28□□□□□ -1.24
CLDN4-205ENST00000476494 SOD2P04179 222 aa7.28□□□□□ -1.24
CLDN4-205ENST00000476494 FCARP24071 287 aa7.28□□□□□ -1.24
CLDN4-205ENST00000476494 GNAQP50148 359 aa7.28□□□□□ -1.24
CLDN4-205ENST00000476494 SIM1P81133 766 aaPredicted RBP7.28□□□□□ -1.24
CLDN4-205ENST00000476494 KCNC4Q03721 635 aa7.28□□□□□ -1.24
CLDN4-205ENST00000476494 SEMA3BQ13214 749 aa7.28□□□□□ -1.24
CLDN4-205ENST00000476494 KIZQ2M2Z5 673 aa7.28□□□□□ -1.24
CLDN4-205ENST00000476494 GNPTABQ3T906 1256 aa7.28□□□□□ -1.24
CLDN4-205ENST00000476494 IFIT1BQ5T764 474 aaKnown RBP7.28□□□□□ -1.24
CLDN4-205ENST00000476494 TANGO2Q6ICL3 276 aa7.28□□□□□ -1.24
CLDN4-205ENST00000476494 PDXDC2PQ6P474 469 aa7.28□□□□□ -1.24
CLDN4-205ENST00000476494 APOA5Q6Q788 366 aa7.28□□□□□ -1.24
CLDN4-205ENST00000476494 ENAHQ8N8S7 591 aaPredicted RBP7.28□□□□□ -1.24
CLDN4-205ENST00000476494 TRAIPQ9BWF2 469 aa7.28□□□□□ -1.24
CLDN4-205ENST00000476494 LRRC2Q9BYS8 371 aa7.28□□□□□ -1.24
CLDN4-205ENST00000476494 PRORYQ9H606 182 aa7.28□□□□□ -1.24
CLDN4-205ENST00000476494 CHST7Q9NS84 486 aa7.28□□□□□ -1.24
CLDN4-205ENST00000476494 RBM12Q9NTZ6 932 aaKnown RBP7.28□□□□□ -1.24
CLDN4-205ENST00000476494 RBM28Q9NW13 759 aaKnown RBP7.28□□□□□ -1.24
CLDN4-205ENST00000476494 STK39Q9UEW8 545 aa7.28□□□□□ -1.24
CLDN4-205ENST00000476494 NID2Q14112 1375 aa7.28□□□□□ -1.24
CLDN4-205ENST00000476494 THADAQ6YHU6 1953 aa7.28□□□□□ -1.24
CLDN4-205ENST00000476494 GOLGA8BA8MQT2 603 aa7.27□□□□□ -1.25
CLDN4-205ENST00000476494 PATE3B3GLJ2 98 aa7.27□□□□□ -1.25
CLDN4-205ENST00000476494 PYCARD-AS1I3L0S3 204 aa7.27□□□□□ -1.25
CLDN4-205ENST00000476494 C2CD2LO14523 706 aa7.27□□□□□ -1.25
CLDN4-205ENST00000476494 EXTL3O43909 919 aa7.27□□□□□ -1.25
CLDN4-205ENST00000476494 OFD1O75665 1012 aa7.27□□□□□ -1.25
CLDN4-205ENST00000476494 KIF5BP33176 963 aa7.27□□□□□ -1.25
CLDN4-205ENST00000476494 PXNP49023 591 aaPredicted RBP7.27□□□□□ -1.25
CLDN4-205ENST00000476494 AFF1P51825 1210 aaKnown RBP7.27□□□□□ -1.25
CLDN4-205ENST00000476494 MLLT6P55198 1093 aaPredicted RBP7.27□□□□□ -1.25
CLDN4-205ENST00000476494 IRX4P78413 519 aa7.27□□□□□ -1.25
CLDN4-205ENST00000476494 DSG1Q02413 1049 aa7.27□□□□□ -1.25
CLDN4-205ENST00000476494 SCRN1Q12765 414 aa7.27□□□□□ -1.25
CLDN4-205ENST00000476494 SLC35G1Q2M3R5 365 aa7.27□□□□□ -1.25
CLDN4-205ENST00000476494 FCHSD1Q86WN1 690 aa7.27□□□□□ -1.25
CLDN4-205ENST00000476494 PALB2Q86YC2 1186 aa7.27□□□□□ -1.25
CLDN4-205ENST00000476494 CCDC83Q8IWF9 413 aa7.27□□□□□ -1.25
CLDN4-205ENST00000476494 SCUBE3Q8IX30 993 aa7.27□□□□□ -1.25
CLDN4-205ENST00000476494 NECAB1Q8N987 351 aa7.27□□□□□ -1.25
CLDN4-205ENST00000476494 FANCBQ8NB91 859 aa7.27□□□□□ -1.25
CLDN4-205ENST00000476494 SMARCC2Q8TAQ2 1214 aa7.27□□□□□ -1.25
CLDN4-205ENST00000476494 RSPH1Q8WYR4 309 aa7.27□□□□□ -1.25
CLDN4-205ENST00000476494 WASF1Q92558 559 aa7.27□□□□□ -1.25
CLDN4-205ENST00000476494 LZTS2Q9BRK4 669 aa7.27□□□□□ -1.25
CLDN4-205ENST00000476494 LARP6Q9BRS8 491 aaKnown RBP7.27□□□□□ -1.25
CLDN4-205ENST00000476494 HERC2P3Q9BVR0 1158 aa7.27□□□□□ -1.25
CLDN4-205ENST00000476494 AMNQ9BXJ7 453 aa7.27□□□□□ -1.25
CLDN4-205ENST00000476494 KAT14Q9H8E8 782 aa7.27□□□□□ -1.25
CLDN4-205ENST00000476494 ZNF334Q9HCZ1 680 aaPredicted RBP7.27□□□□□ -1.25
CLDN4-205ENST00000476494 MARCH5Q9NX47 278 aa7.27□□□□□ -1.25
CLDN4-205ENST00000476494 BRPF3Q9ULD4 1205 aa7.27□□□□□ -1.25
CLDN4-205ENST00000476494 NAP1L2Q9ULW6 460 aaPredicted RBP7.27□□□□□ -1.25
CLDN4-205ENST00000476494 AHCTF1Q8WYP5 2266 aa7.27□□□□□ -1.25
CLDN4-205ENST00000476494 GOLGA8AA7E2F4 631 aa7.26□□□□□ -1.25
CLDN4-205ENST00000476494 MAP3K13O43283 966 aa7.26□□□□□ -1.25
CLDN4-205ENST00000476494 LARGE1O95461 756 aa7.26□□□□□ -1.25
CLDN4-205ENST00000476494 IFNAR1P17181 557 aa7.26□□□□□ -1.25
CLDN4-205ENST00000476494 CCNE1P24864 410 aa7.26□□□□□ -1.25
CLDN4-205ENST00000476494 SMARCA1P28370 1054 aa7.26□□□□□ -1.25
CLDN4-205ENST00000476494 STK3Q13188 491 aa7.26□□□□□ -1.25
CLDN4-205ENST00000476494 RTN1Q16799 776 aa7.26□□□□□ -1.25
CLDN4-205ENST00000476494 NOMO2Q5JPE7 1267 aa7.26□□□□□ -1.25
CLDN4-205ENST00000476494 PCNX4Q63HM2 1172 aa7.26□□□□□ -1.25
CLDN4-205ENST00000476494 PKN3Q6P5Z2 889 aa7.26□□□□□ -1.25
CLDN4-205ENST00000476494 PLPPR4Q7Z2D5 763 aa7.26□□□□□ -1.25
CLDN4-205ENST00000476494 ZNF654Q8IZM8 581 aa7.26□□□□□ -1.25
CLDN4-205ENST00000476494 FAM184AQ8NB25 1140 aa7.26□□□□□ -1.25
CLDN4-205ENST00000476494 SPRYD3Q8NCJ5 442 aa7.26□□□□□ -1.25
CLDN4-205ENST00000476494 RNF169Q8NCN4 708 aa7.26□□□□□ -1.25
CLDN4-205ENST00000476494 GIMAP8Q8ND71 665 aaPredicted RBP7.26□□□□□ -1.25
CLDN4-205ENST00000476494 CTCFLQ8NI51 663 aaPredicted RBP7.26□□□□□ -1.25
CLDN4-205ENST00000476494 ADAMTS14Q8WXS8 1223 aa7.26□□□□□ -1.25
CLDN4-205ENST00000476494 LPPQ93052 612 aa7.26□□□□□ -1.25
CLDN4-205ENST00000476494 ELSPBP1Q96BH3 223 aa7.26□□□□□ -1.25
CLDN4-205ENST00000476494 PPP1R16BQ96T49 567 aa7.26□□□□□ -1.25
CLDN4-205ENST00000476494 ZKSCAN3Q9BRR0 538 aa7.26□□□□□ -1.25
CLDN4-205ENST00000476494 ATP6V1DQ9Y5K8 247 aa7.26□□□□□ -1.25
CLDN4-205ENST00000476494 VWA8A3KMH1 1905 aa7.26□□□□□ -1.25
CLDN4-205ENST00000476494 COL5A1P20908 1838 aaPredicted RBP7.26□□□□□ -1.25
CLDN4-205ENST00000476494 C2CD3Q4AC94 2353 aa7.26□□□□□ -1.25
CLDN4-205ENST00000476494 IGKV6D-21A0A0A0MT36 114 aa7.25□□□□□ -1.25
CLDN4-205ENST00000476494 CCDC194A0A1B0GVG4 234 aa7.25□□□□□ -1.25
CLDN4-205ENST00000476494 GCOM1H8Y6P7 765 aaPredicted RBP7.25□□□□□ -1.25
CLDN4-205ENST00000476494 NRP1O14786 923 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms