RNA–Protein interactions for RNA: ENST00000475716.5

SNX5-208, Transcript of sorting nexin 5, human

TSL 3

Gene SNX5, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNX5-208	ENST00000475716	ADAM28	Q9UKQ2	775 aa		11.16	□□□□□ -0.62
SNX5-208	ENST00000475716	FAM208B	Q5VWN6	2430 aa		11.16	□□□□□ -0.62
SNX5-208	ENST00000475716	PATJ	Q8NI35	1801 aa		11.15	□□□□□ -0.62
SNX5-208	ENST00000475716	GOLGA8A	A7E2F4	631 aa		11.15	□□□□□ -0.62
SNX5-208	ENST00000475716	GOLGA8B	A8MQT2	603 aa		11.15	□□□□□ -0.62
SNX5-208	ENST00000475716	TM4SF5	O14894	197 aa		11.15	□□□□□ -0.62
SNX5-208	ENST00000475716	NR1I2	O75469	434 aa		11.15	□□□□□ -0.62
SNX5-208	ENST00000475716	HNRNPA1	P09651	372 aa	Known RBP eCLIP	11.15	□□□□□ -0.62
SNX5-208	ENST00000475716	NRL	P54845	237 aa		11.15	□□□□□ -0.62
SNX5-208	ENST00000475716	EXOSC10	Q01780	885 aa	Known RBP	11.15	□□□□□ -0.62
SNX5-208	ENST00000475716	SATB1	Q01826	763 aa		11.15	□□□□□ -0.62
SNX5-208	ENST00000475716	LAMTOR4	Q0VGL1	99 aa		11.15	□□□□□ -0.62
SNX5-208	ENST00000475716	SIM2	Q14190	667 aa	Predicted RBP	11.15	□□□□□ -0.62
SNX5-208	ENST00000475716	NECTIN1	Q15223	517 aa		11.15	□□□□□ -0.62
SNX5-208	ENST00000475716	B3GNT9	Q6UX72	402 aa		11.15	□□□□□ -0.62
SNX5-208	ENST00000475716	SRGAP1	Q7Z6B7	1085 aa		11.15	□□□□□ -0.62
SNX5-208	ENST00000475716	CEP57	Q86XR8	500 aa		11.15	□□□□□ -0.62
SNX5-208	ENST00000475716	GPR65	Q8IYL9	337 aa		11.15	□□□□□ -0.62
SNX5-208	ENST00000475716	CNNM3	Q8NE01	707 aa		11.15	□□□□□ -0.62
SNX5-208	ENST00000475716	HASPIN	Q8TF76	798 aa		11.15	□□□□□ -0.62
SNX5-208	ENST00000475716	RXFP3	Q9NSD7	469 aa		11.15	□□□□□ -0.62
SNX5-208	ENST00000475716	MYH15	Q9Y2K3	1946 aa		11.15	□□□□□ -0.62
SNX5-208	ENST00000475716	FASN	P49327	2511 aa	Known RBP	11.14	□□□□□ -0.63
SNX5-208	ENST00000475716	ESYT2	A0FGR8	921 aa		11.14	□□□□□ -0.63
SNX5-208	ENST00000475716	CHURC1-FNTB	B4DL54	471 aa		11.14	□□□□□ -0.63
SNX5-208	ENST00000475716	EML1	O00423	815 aa		11.14	□□□□□ -0.63
SNX5-208	ENST00000475716	LRP3	O75074	770 aa		11.14	□□□□□ -0.63
SNX5-208	ENST00000475716	ECI2	O75521	394 aa		11.14	□□□□□ -0.63
SNX5-208	ENST00000475716	IGFBP6	P24592	240 aa	Predicted RBP	11.14	□□□□□ -0.63
SNX5-208	ENST00000475716	FNTB	P49356	437 aa		11.14	□□□□□ -0.63
SNX5-208	ENST00000475716	GAS6	Q14393	721 aa		11.14	□□□□□ -0.63
SNX5-208	ENST00000475716	GRM2	Q14416	872 aa		11.14	□□□□□ -0.63
SNX5-208	ENST00000475716	CCDC6	Q16204	474 aa		11.14	□□□□□ -0.63
SNX5-208	ENST00000475716	AXDND1	Q5T1B0	1012 aa	Predicted RBP	11.14	□□□□□ -0.63
SNX5-208	ENST00000475716	LIN9	Q5TKA1	542 aa		11.14	□□□□□ -0.63
SNX5-208	ENST00000475716	FAM171A1	Q5VUB5	890 aa		11.14	□□□□□ -0.63
SNX5-208	ENST00000475716	MAMSTR	Q6ZN01	415 aa		11.14	□□□□□ -0.63
SNX5-208	ENST00000475716	CDR2L	Q86X02	465 aa	Predicted RBP	11.14	□□□□□ -0.63
SNX5-208	ENST00000475716	RNF149	Q8NC42	400 aa		11.14	□□□□□ -0.63
SNX5-208	ENST00000475716	SLC7A14	Q8TBB6	771 aa		11.14	□□□□□ -0.63
SNX5-208	ENST00000475716	CHRD	Q9H2X0	955 aa		11.14	□□□□□ -0.63
SNX5-208	ENST00000475716	NXF3	Q9H4D5	531 aa	Known RBP	11.14	□□□□□ -0.63
SNX5-208	ENST00000475716	WRAP73	Q9P2S5	460 aa	Predicted RBP	11.14	□□□□□ -0.63
SNX5-208	ENST00000475716	MRPS17	Q9Y2R5	130 aa	Known RBP	11.14	□□□□□ -0.63
SNX5-208	ENST00000475716	MTCL1	Q9Y4B5	1905 aa	Known RBP	11.13	□□□□□ -0.63
SNX5-208	ENST00000475716	KLF18	A0A0U1RQI7	1052 aa		11.13	□□□□□ -0.63
SNX5-208	ENST00000475716	ZBTB39	O15060	712 aa		11.13	□□□□□ -0.63
SNX5-208	ENST00000475716	TSPAN1	O60635	241 aa		11.13	□□□□□ -0.63
SNX5-208	ENST00000475716	XYLB	O75191	536 aa		11.13	□□□□□ -0.63
SNX5-208	ENST00000475716	PROS1	P07225	676 aa		11.13	□□□□□ -0.63
SNX5-208	ENST00000475716	USP11	P51784	963 aa		11.13	□□□□□ -0.63
SNX5-208	ENST00000475716	PSMC5	P62195	406 aa		11.13	□□□□□ -0.63
SNX5-208	ENST00000475716	SHC2	P98077	582 aa		11.13	□□□□□ -0.63
SNX5-208	ENST00000475716	SF3A2	Q15428	464 aa	Known RBP	11.13	□□□□□ -0.63
SNX5-208	ENST00000475716	PSMD5	Q16401	504 aa		11.13	□□□□□ -0.63
SNX5-208	ENST00000475716	SLC5A9	Q2M3M2	681 aa		11.13	□□□□□ -0.63
SNX5-208	ENST00000475716	PABPC1L	Q4VXU2	614 aa	Known RBP	11.13	□□□□□ -0.63
SNX5-208	ENST00000475716	RDM1	Q8NG50	284 aa		11.13	□□□□□ -0.63
SNX5-208	ENST00000475716	CEP170P1	Q96L14	293 aa		11.13	□□□□□ -0.63
SNX5-208	ENST00000475716	TTPAL	Q9BTX7	342 aa		11.13	□□□□□ -0.63
SNX5-208	ENST00000475716	CSRNP2	Q9H175	543 aa		11.13	□□□□□ -0.63
SNX5-208	ENST00000475716	CXCL16	Q9H2A7	254 aa		11.13	□□□□□ -0.63
SNX5-208	ENST00000475716	NAP1L2	Q9ULW6	460 aa	Predicted RBP	11.13	□□□□□ -0.63
SNX5-208	ENST00000475716	GIT1	Q9Y2X7	761 aa		11.13	□□□□□ -0.63
SNX5-208	ENST00000475716	MRPS23	Q9Y3D9	190 aa	Known RBP	11.13	□□□□□ -0.63
SNX5-208	ENST00000475716	WDR81	Q562E7	1941 aa		11.12	□□□□□ -0.63
SNX5-208	ENST00000475716	C1QTNF9B	B2RNN3	333 aa		11.12	□□□□□ -0.63
SNX5-208	ENST00000475716	AXIN1	O15169	862 aa		11.12	□□□□□ -0.63
SNX5-208	ENST00000475716	TDP2	O95551	362 aa		11.12	□□□□□ -0.63
SNX5-208	ENST00000475716	C1QTNF9	P0C862	333 aa		11.12	□□□□□ -0.63
SNX5-208	ENST00000475716	GNA11	P29992	359 aa		11.12	□□□□□ -0.63
SNX5-208	ENST00000475716	OR1D2	P34982	312 aa		11.12	□□□□□ -0.63
SNX5-208	ENST00000475716	CXCL12	P48061	93 aa		11.12	□□□□□ -0.63
SNX5-208	ENST00000475716	HSP90AA2P	Q14568	343 aa	Predicted RBP	11.12	□□□□□ -0.63
SNX5-208	ENST00000475716		Q4G0T1	1027 aa		11.12	□□□□□ -0.63
SNX5-208	ENST00000475716	HEATR6	Q6AI08	1181 aa	Known RBP	11.12	□□□□□ -0.63
SNX5-208	ENST00000475716	IL31	Q6EBC2	164 aa		11.12	□□□□□ -0.63
SNX5-208	ENST00000475716	PSPC1	Q8WXF1	523 aa	Known RBP	11.12	□□□□□ -0.63
SNX5-208	ENST00000475716	FAM3C	Q92520	227 aa		11.12	□□□□□ -0.63
SNX5-208	ENST00000475716	JPH2	Q9BR39	696 aa	Predicted RBP	11.12	□□□□□ -0.63
SNX5-208	ENST00000475716	DHX33	Q9H6R0	707 aa	Known RBP	11.12	□□□□□ -0.63
SNX5-208	ENST00000475716	C2orf42	Q9NWW7	574 aa		11.12	□□□□□ -0.63
SNX5-208	ENST00000475716	PARP2	Q9UGN5	583 aa		11.12	□□□□□ -0.63
SNX5-208	ENST00000475716	KCNH3	Q9ULD8	1083 aa		11.12	□□□□□ -0.63
SNX5-208	ENST00000475716	F5	P12259	2224 aa		11.12	□□□□□ -0.63
SNX5-208	ENST00000475716	NOTCH4	Q99466	2003 aa		11.11	□□□□□ -0.63
SNX5-208	ENST00000475716	WDFY3	Q8IZQ1	3526 aa		11.11	□□□□□ -0.63
SNX5-208	ENST00000475716	CASTOR2	A6NHX0	329 aa		11.11	□□□□□ -0.63
SNX5-208	ENST00000475716	MAN2B1	O00754	1011 aa		11.11	□□□□□ -0.63
SNX5-208	ENST00000475716	B4GALT5	O43286	388 aa		11.11	□□□□□ -0.63
SNX5-208	ENST00000475716	PRPF3	O43395	683 aa	Known RBP	11.11	□□□□□ -0.63
SNX5-208	ENST00000475716	ERLIN2	O94905	339 aa		11.11	□□□□□ -0.63
SNX5-208	ENST00000475716	KIF4A	O95239	1232 aa		11.11	□□□□□ -0.63
SNX5-208	ENST00000475716	RHO	P08100	348 aa		11.11	□□□□□ -0.63
SNX5-208	ENST00000475716	CHRNB1	P11230	501 aa		11.11	□□□□□ -0.63
SNX5-208	ENST00000475716	CEBPB	P17676	345 aa		11.11	□□□□□ -0.63
SNX5-208	ENST00000475716	FCAR	P24071	287 aa		11.11	□□□□□ -0.63
SNX5-208	ENST00000475716	HOXA9	P31269	272 aa		11.11	□□□□□ -0.63
SNX5-208	ENST00000475716	CCR3	P51677	355 aa		11.11	□□□□□ -0.63
SNX5-208	ENST00000475716	PTEN	P60484	403 aa		11.11	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms