RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 TXNRD3Q86VQ6 643 aa6.45□□□□□ -1.38
ECHDC1-215ENST00000475319 SPARTQ8N0X7 666 aa6.45□□□□□ -1.38
ECHDC1-215ENST00000475319 AFAP1L2Q8N4X5 818 aa6.45□□□□□ -1.38
ECHDC1-215ENST00000475319 ZNF713Q8N859 430 aaPredicted RBP6.45□□□□□ -1.38
ECHDC1-215ENST00000475319 CCDC89Q8N998 374 aa6.45□□□□□ -1.38
ECHDC1-215ENST00000475319 APPL2Q8NEU8 664 aa6.45□□□□□ -1.38
ECHDC1-215ENST00000475319 TOR1AIP2Q8NFQ8 470 aa6.45□□□□□ -1.38
ECHDC1-215ENST00000475319 BRSK1Q8TDC3 778 aa6.45□□□□□ -1.38
ECHDC1-215ENST00000475319 SGCDQ92629 289 aa6.45□□□□□ -1.38
ECHDC1-215ENST00000475319 ELMO3Q96BJ8 720 aa6.45□□□□□ -1.38
ECHDC1-215ENST00000475319 CFAP36Q96G28 342 aa6.45□□□□□ -1.38
ECHDC1-215ENST00000475319 COG3Q96JB2 828 aa6.45□□□□□ -1.38
ECHDC1-215ENST00000475319 GDAP1L1Q96MZ0 367 aa6.45□□□□□ -1.38
ECHDC1-215ENST00000475319 DHRS4Q9BTZ2 278 aa6.45□□□□□ -1.38
ECHDC1-215ENST00000475319 RUSC1Q9BVN2 902 aa6.45□□□□□ -1.38
ECHDC1-215ENST00000475319 GPR108Q9NPR9 543 aa6.45□□□□□ -1.38
ECHDC1-215ENST00000475319 FAM86C1Q9NVL1 165 aa6.45□□□□□ -1.38
ECHDC1-215ENST00000475319 RHBDL2Q9NX52 303 aa6.45□□□□□ -1.38
ECHDC1-215ENST00000475319 MAPRE3Q9UPY8 281 aa6.45□□□□□ -1.38
ECHDC1-215ENST00000475319 ZNF711Q9Y462 761 aa6.45□□□□□ -1.38
ECHDC1-215ENST00000475319 COMMD3-BMI1R4GMX3 469 aa6.45□□□□□ -1.38
ECHDC1-215ENST00000475319 SYNMO15061 1565 aa6.44□□□□□ -1.38
ECHDC1-215ENST00000475319 DPPA5A6NC42 116 aa6.44□□□□□ -1.38
ECHDC1-215ENST00000475319 CHURC1-FNTBB4DL54 471 aa6.44□□□□□ -1.38
ECHDC1-215ENST00000475319 GOLGA8KD6RF30 607 aa6.44□□□□□ -1.38
ECHDC1-215ENST00000475319 E7ENQ6 273 aa6.44□□□□□ -1.38
ECHDC1-215ENST00000475319 H3BRJ5 948 aa6.44□□□□□ -1.38
ECHDC1-215ENST00000475319 AGRPO00253 132 aa6.44□□□□□ -1.38
ECHDC1-215ENST00000475319 KCNJ13O60928 360 aa6.44□□□□□ -1.38
ECHDC1-215ENST00000475319 URI1O94763 535 aaPredicted RBP6.44□□□□□ -1.38
ECHDC1-215ENST00000475319 FBXO21O94952 628 aa6.44□□□□□ -1.38
ECHDC1-215ENST00000475319 LCA5LO95447 670 aa6.44□□□□□ -1.38
ECHDC1-215ENST00000475319 BAG3O95817 575 aa6.44□□□□□ -1.38
ECHDC1-215ENST00000475319 APOEP02649 317 aa6.44□□□□□ -1.38
ECHDC1-215ENST00000475319 S100A6P06703 90 aa6.44□□□□□ -1.38
ECHDC1-215ENST00000475319 PCP11498 1178 aaKnown RBP6.44□□□□□ -1.38
ECHDC1-215ENST00000475319 SDSP20132 328 aa6.44□□□□□ -1.38
ECHDC1-215ENST00000475319 CETN2P41208 172 aa6.44□□□□□ -1.38
ECHDC1-215ENST00000475319 STAT6P42226 847 aa6.44□□□□□ -1.38
ECHDC1-215ENST00000475319 HALP42357 657 aa6.44□□□□□ -1.38
ECHDC1-215ENST00000475319 PDE6CP51160 858 aa6.44□□□□□ -1.38
ECHDC1-215ENST00000475319 RARSP54136 660 aaKnown RBP6.44□□□□□ -1.38
ECHDC1-215ENST00000475319 POLE2P56282 527 aa6.44□□□□□ -1.38
ECHDC1-215ENST00000475319 POLR2FP61218 127 aaKnown RBP6.44□□□□□ -1.38
ECHDC1-215ENST00000475319 HSPA14Q0VDF9 509 aa6.44□□□□□ -1.38
ECHDC1-215ENST00000475319 WDR43Q15061 677 aaKnown RBP eCLIP6.44□□□□□ -1.38
ECHDC1-215ENST00000475319 NFE2Q16621 373 aaPredicted RBP6.44□□□□□ -1.38
ECHDC1-215ENST00000475319 ACCSLQ4AC99 568 aa6.44□□□□□ -1.38
ECHDC1-215ENST00000475319 FNDC3BQ53EP0 1204 aaKnown RBP6.44□□□□□ -1.38
ECHDC1-215ENST00000475319 BMP2KLQ5H9B9 411 aa6.44□□□□□ -1.38
ECHDC1-215ENST00000475319 SPECC1Q5M775 1068 aa6.44□□□□□ -1.38
ECHDC1-215ENST00000475319 TMEM201Q5SNT2 666 aa6.44□□□□□ -1.38
ECHDC1-215ENST00000475319 NDUFAF5Q5TEU4 345 aa6.44□□□□□ -1.38
ECHDC1-215ENST00000475319 SPATA1Q5VX52 437 aa6.44□□□□□ -1.38
ECHDC1-215ENST00000475319 CNNM4Q6P4Q7 775 aa6.44□□□□□ -1.38
ECHDC1-215ENST00000475319 CCDC62Q6P9F0 684 aa6.44□□□□□ -1.38
ECHDC1-215ENST00000475319 TUBA3EQ6PEY2 450 aa6.44□□□□□ -1.38
ECHDC1-215ENST00000475319 ARHGEF18Q6ZSZ5 1173 aa6.44□□□□□ -1.38
ECHDC1-215ENST00000475319 CYFIP1Q7L576 1253 aa6.44□□□□□ -1.38
ECHDC1-215ENST00000475319 MCM10Q7L590 875 aa6.44□□□□□ -1.38
ECHDC1-215ENST00000475319 LRRTM3Q86VH5 581 aa6.44□□□□□ -1.38
ECHDC1-215ENST00000475319 LRRN4CLQ8ND94 238 aa6.44□□□□□ -1.38
ECHDC1-215ENST00000475319 STAMBPL1Q96FJ0 436 aa6.44□□□□□ -1.38
ECHDC1-215ENST00000475319 INTS4Q96HW7 963 aaKnown RBP6.44□□□□□ -1.38
ECHDC1-215ENST00000475319 C1orf74Q96LT6 269 aa6.44□□□□□ -1.38
ECHDC1-215ENST00000475319 CEP295NLQ96MC4 621 aa6.44□□□□□ -1.38
ECHDC1-215ENST00000475319 TUBGCP5Q96RT8 1024 aa6.44□□□□□ -1.38
ECHDC1-215ENST00000475319 OSBPL5Q9H0X9 879 aaPredicted RBP6.44□□□□□ -1.38
ECHDC1-215ENST00000475319 KAT14Q9H8E8 782 aa6.44□□□□□ -1.38
ECHDC1-215ENST00000475319 EURLQ9NYK6 297 aa6.44□□□□□ -1.38
ECHDC1-215ENST00000475319 SAP30BPQ9UHR5 308 aaKnown RBP6.44□□□□□ -1.38
ECHDC1-215ENST00000475319 PPP1R9AQ9ULJ8 1098 aa6.44□□□□□ -1.38
ECHDC1-215ENST00000475319 CNPY2Q9Y2B0 182 aa6.44□□□□□ -1.38
ECHDC1-215ENST00000475319 MRPL11Q9Y3B7 192 aaKnown RBP6.44□□□□□ -1.38
ECHDC1-215ENST00000475319 FAM32AQ9Y421 112 aaKnown RBP6.44□□□□□ -1.38
ECHDC1-215ENST00000475319 ATP6V1DQ9Y5K8 247 aa6.44□□□□□ -1.38
ECHDC1-215ENST00000475319 GRIN2DO15399 1336 aa6.44□□□□□ -1.38
ECHDC1-215ENST00000475319 ZNF521Q96K83 1311 aa6.44□□□□□ -1.38
ECHDC1-215ENST00000475319 WDR33Q9C0J8 1336 aaKnown RBP6.44□□□□□ -1.38
ECHDC1-215ENST00000475319 PARD3Q8TEW0 1356 aa6.43□□□□□ -1.38
ECHDC1-215ENST00000475319 DUOX2Q9NRD8 1548 aa6.43□□□□□ -1.38
ECHDC1-215ENST00000475319 PRAMEF27A3QJZ7 478 aa6.43□□□□□ -1.38
ECHDC1-215ENST00000475319 DCDC2CA8MYV0 355 aa6.43□□□□□ -1.38
ECHDC1-215ENST00000475319 FOXN3O00409 490 aaPredicted RBP6.43□□□□□ -1.38
ECHDC1-215ENST00000475319 ASAP2O43150 1006 aa6.43□□□□□ -1.38
ECHDC1-215ENST00000475319 TSPAN6O43657 245 aa6.43□□□□□ -1.38
ECHDC1-215ENST00000475319 KATNA1O75449 491 aa6.43□□□□□ -1.38
ECHDC1-215ENST00000475319 CYP11A1P05108 521 aa6.43□□□□□ -1.38
ECHDC1-215ENST00000475319 GSTA1P08263 222 aa6.43□□□□□ -1.38
ECHDC1-215ENST00000475319 ALADP13716 330 aa6.43□□□□□ -1.38
ECHDC1-215ENST00000475319 EIF2S2P20042 333 aaKnown RBP6.43□□□□□ -1.38
ECHDC1-215ENST00000475319 HOXC13P31276 330 aa6.43□□□□□ -1.38
ECHDC1-215ENST00000475319 GPC3P51654 580 aa6.43□□□□□ -1.38
ECHDC1-215ENST00000475319 EPHB1P54762 984 aa6.43□□□□□ -1.38
ECHDC1-215ENST00000475319 NLRP12P59046 1061 aa6.43□□□□□ -1.38
ECHDC1-215ENST00000475319 B2MP61769 119 aa6.43□□□□□ -1.38
ECHDC1-215ENST00000475319 GNGT1P63211 74 aa6.43□□□□□ -1.38
ECHDC1-215ENST00000475319 BNIP1Q12981 228 aa6.43□□□□□ -1.38
ECHDC1-215ENST00000475319 LRRC41Q15345 812 aa6.43□□□□□ -1.38
ECHDC1-215ENST00000475319 IFI16Q16666 785 aaKnown RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms