RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 B3GALT6Q96L58 329 aa14□□□□□ -0.17
SKA3-206ENST00000475251 CCDC43Q96MW1 224 aaKnown RBP14□□□□□ -0.17
SKA3-206ENST00000475251 NFKBIZQ9BYH8 718 aa14□□□□□ -0.17
SKA3-206ENST00000475251 FOXQ1Q9C009 403 aa14□□□□□ -0.17
SKA3-206ENST00000475251 SPATA6Q9NWH7 488 aaPredicted RBP14□□□□□ -0.17
SKA3-206ENST00000475251 MIOSQ9NXC5 875 aa14□□□□□ -0.17
SKA3-206ENST00000475251 WRAP73Q9P2S5 460 aaPredicted RBP14□□□□□ -0.17
SKA3-206ENST00000475251 FBXW11Q9UKB1 542 aa14□□□□□ -0.17
SKA3-206ENST00000475251 PCDHGA2Q9Y5H1 932 aa14□□□□□ -0.17
SKA3-206ENST00000475251 ZNF292O60281 2723 aa14□□□□□ -0.17
SKA3-206ENST00000475251 MIA3Q5JRA6 1907 aa14□□□□□ -0.17
SKA3-206ENST00000475251 F8W810 466 aa13.99□□□□□ -0.17
SKA3-206ENST00000475251 NCAM2O15394 837 aa13.99□□□□□ -0.17
SKA3-206ENST00000475251 CCNT1O60563 726 aaKnown RBP13.99□□□□□ -0.17
SKA3-206ENST00000475251 DGAT1O75907 488 aa13.99□□□□□ -0.17
SKA3-206ENST00000475251 BAG4O95429 457 aaKnown RBP13.99□□□□□ -0.17
SKA3-206ENST00000475251 ARF4P18085 180 aaPredicted RBP13.99□□□□□ -0.17
SKA3-206ENST00000475251 MBTD1Q05BQ5 628 aa13.99□□□□□ -0.17
SKA3-206ENST00000475251 ELAVL2Q12926 359 aaKnown RBP13.99□□□□□ -0.17
SKA3-206ENST00000475251 TUSC3Q13454 348 aa13.99□□□□□ -0.17
SKA3-206ENST00000475251 HSP90AA2PQ14568 343 aaPredicted RBP13.99□□□□□ -0.17
SKA3-206ENST00000475251 RSPO4Q2I0M5 234 aaPredicted RBP13.99□□□□□ -0.17
SKA3-206ENST00000475251 VARS2Q5ST30 1063 aaKnown RBP13.99□□□□□ -0.17
SKA3-206ENST00000475251 NCAPH2Q6IBW4 605 aa13.99□□□□□ -0.17
SKA3-206ENST00000475251 PARM1Q6UWI2 310 aa13.99□□□□□ -0.17
SKA3-206ENST00000475251 GRASPQ7Z6J2 395 aaPredicted RBP13.99□□□□□ -0.17
SKA3-206ENST00000475251 FGF14Q92915 247 aa13.99□□□□□ -0.17
SKA3-206ENST00000475251 NELL2Q99435 816 aa13.99□□□□□ -0.17
SKA3-206ENST00000475251 TTPALQ9BTX7 342 aa13.99□□□□□ -0.17
SKA3-206ENST00000475251 DDX23Q9BUQ8 820 aaKnown RBP13.99□□□□□ -0.17
SKA3-206ENST00000475251 NXF3Q9H4D5 531 aaKnown RBP13.99□□□□□ -0.17
SKA3-206ENST00000475251 ARID2Q68CP9 1835 aa13.99□□□□□ -0.17
SKA3-206ENST00000475251 DMXL1Q9Y485 3027 aa13.98□□□□□ -0.17
SKA3-206ENST00000475251 EP300Q09472 2414 aaPredicted RBP13.98□□□□□ -0.17
SKA3-206ENST00000475251 POTEMA6NI47 508 aa13.98□□□□□ -0.17
SKA3-206ENST00000475251 REC8O95072 547 aa13.98□□□□□ -0.17
SKA3-206ENST00000475251 C8AP07357 584 aa13.98□□□□□ -0.17
SKA3-206ENST00000475251 POU2F2P09086 479 aa13.98□□□□□ -0.17
SKA3-206ENST00000475251 GLULP15104 373 aa13.98□□□□□ -0.17
SKA3-206ENST00000475251 RPL17P18621 184 aaKnown RBP13.98□□□□□ -0.17
SKA3-206ENST00000475251 AKAP5P24588 427 aa13.98□□□□□ -0.17
SKA3-206ENST00000475251 SNW1Q13573 536 aaKnown RBP13.98□□□□□ -0.17
SKA3-206ENST00000475251 UBXN2BQ14CS0 331 aa13.98□□□□□ -0.17
SKA3-206ENST00000475251 NPY5RQ15761 445 aa13.98□□□□□ -0.17
SKA3-206ENST00000475251 SLC44A4Q53GD3 710 aa13.98□□□□□ -0.17
SKA3-206ENST00000475251 POTEGQ6S5H5 508 aa13.98□□□□□ -0.17
SKA3-206ENST00000475251 RUFY3Q7L099 469 aa13.98□□□□□ -0.17
SKA3-206ENST00000475251 RTL10Q7L3V2 364 aa13.98□□□□□ -0.17
SKA3-206ENST00000475251 DCLK2Q8N568 766 aa13.98□□□□□ -0.17
SKA3-206ENST00000475251 GSTCDQ8NEC7 633 aa13.98□□□□□ -0.17
SKA3-206ENST00000475251 PIK3R5Q8WYR1 880 aa13.98□□□□□ -0.17
SKA3-206ENST00000475251 FGF13Q92913 245 aa13.98□□□□□ -0.17
SKA3-206ENST00000475251 ZNF274Q96GC6 653 aaPredicted RBP13.98□□□□□ -0.17
SKA3-206ENST00000475251 DYDC2Q96IM9 177 aa13.98□□□□□ -0.17
SKA3-206ENST00000475251 PHF20Q9BVI0 1012 aa13.98□□□□□ -0.17
SKA3-206ENST00000475251 RGL1Q9NZL6 768 aa13.98□□□□□ -0.17
SKA3-206ENST00000475251 DAXXQ9UER7 740 aaPredicted RBP13.98□□□□□ -0.17
SKA3-206ENST00000475251 PARP2Q9UGN5 583 aa13.98□□□□□ -0.17
SKA3-206ENST00000475251 POLIQ9UNA4 740 aa13.98□□□□□ -0.17
SKA3-206ENST00000475251 MYH15Q9Y2K3 1946 aa13.98□□□□□ -0.17
SKA3-206ENST00000475251 A0A1B0GUA9 196 aa13.97□□□□□ -0.17
SKA3-206ENST00000475251 PRR5-ARHGAP8B1AHC4 643 aa13.97□□□□□ -0.17
SKA3-206ENST00000475251 GABBR2O75899 941 aa13.97□□□□□ -0.17
SKA3-206ENST00000475251 CDKL5O76039 1030 aa13.97□□□□□ -0.17
SKA3-206ENST00000475251 NPTXRO95502 500 aa13.97□□□□□ -0.17
SKA3-206ENST00000475251 ARHGAP8P85298 464 aa13.97□□□□□ -0.17
SKA3-206ENST00000475251 CYP4A11Q02928 519 aa13.97□□□□□ -0.17
SKA3-206ENST00000475251 LMNB2Q03252 620 aa13.97□□□□□ -0.17
SKA3-206ENST00000475251 CAPSQ13938 189 aa13.97□□□□□ -0.17
SKA3-206ENST00000475251 CTTNQ14247 550 aaKnown RBP13.97□□□□□ -0.17
SKA3-206ENST00000475251 PSMD5Q16401 504 aa13.97□□□□□ -0.17
SKA3-206ENST00000475251 UVSSAQ2YD98 709 aa13.97□□□□□ -0.17
SKA3-206ENST00000475251 RTP2Q5QGT7 225 aa13.97□□□□□ -0.17
SKA3-206ENST00000475251 ZBTB41Q5SVQ8 909 aa13.97□□□□□ -0.17
SKA3-206ENST00000475251 PRSS55Q6UWB4 352 aaPredicted RBP13.97□□□□□ -0.17
SKA3-206ENST00000475251 CENPQQ7L2Z9 268 aaPredicted RBP13.97□□□□□ -0.17
SKA3-206ENST00000475251 TPH2Q8IWU9 490 aa13.97□□□□□ -0.17
SKA3-206ENST00000475251 MAML2Q8IZL2 1156 aaPredicted RBP13.97□□□□□ -0.17
SKA3-206ENST00000475251 HAS1Q92839 578 aa13.97□□□□□ -0.17
SKA3-206ENST00000475251 PRIMPOLQ96LW4 560 aa13.97□□□□□ -0.17
SKA3-206ENST00000475251 RPP25Q9BUL9 199 aaKnown RBP13.97□□□□□ -0.17
SKA3-206ENST00000475251 XPNPEP1Q9NQW7 623 aa13.97□□□□□ -0.17
SKA3-206ENST00000475251 ANKEF1Q9NU02 776 aa13.97□□□□□ -0.17
SKA3-206ENST00000475251 ZSCAN32Q9NX65 697 aa13.97□□□□□ -0.17
SKA3-206ENST00000475251 KCNH3Q9ULD8 1083 aa13.97□□□□□ -0.17
SKA3-206ENST00000475251 MRPS17Q9Y2R5 130 aaKnown RBP13.97□□□□□ -0.17
SKA3-206ENST00000475251 FAM170BA6NMN3 283 aa13.96□□□□□ -0.17
SKA3-206ENST00000475251 LYPLA2O95372 231 aa13.96□□□□□ -0.17
SKA3-206ENST00000475251 ARL2P36404 184 aa13.96□□□□□ -0.17
SKA3-206ENST00000475251 CSTF1Q05048 431 aaKnown RBP13.96□□□□□ -0.17
SKA3-206ENST00000475251 AMHR2Q16671 573 aa13.96□□□□□ -0.17
SKA3-206ENST00000475251 FAM171A1Q5VUB5 890 aa13.96□□□□□ -0.17
SKA3-206ENST00000475251 CEP57Q86XR8 500 aa13.96□□□□□ -0.17
SKA3-206ENST00000475251 LNX1Q8TBB1 728 aaPredicted RBP13.96□□□□□ -0.17
SKA3-206ENST00000475251 CLSTN3Q9BQT9 956 aa13.96□□□□□ -0.17
SKA3-206ENST00000475251 FAM126AQ9BYI3 521 aaPredicted RBP13.96□□□□□ -0.17
SKA3-206ENST00000475251 LTB4R2Q9NPC1 389 aa13.96□□□□□ -0.17
SKA3-206ENST00000475251 PRMT7Q9NVM4 692 aaPredicted RBP13.96□□□□□ -0.17
SKA3-206ENST00000475251 KLK14Q9P0G3 267 aa13.96□□□□□ -0.17
SKA3-206ENST00000475251 CYP46A1Q9Y6A2 500 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms