RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 PPP4R3CPQ6ZMV5 832 aa27.58■■■□□ 2.01
TMEM54-205ENST00000475208 GET4Q7L5D6 327 aaPredicted RBP27.58■■■□□ 2.01
TMEM54-205ENST00000475208 SLC44A3Q8N4M1 653 aa27.58■■■□□ 2.01
TMEM54-205ENST00000475208 DTWD2Q8NBA8 298 aa27.58■■■□□ 2.01
TMEM54-205ENST00000475208 NKD2Q969F2 451 aaPredicted RBP27.58■■■□□ 2.01
TMEM54-205ENST00000475208 PRIMPOLQ96LW4 560 aa27.58■■■□□ 2.01
TMEM54-205ENST00000475208 TMEM60Q9H2L4 133 aa27.58■■■□□ 2.01
TMEM54-205ENST00000475208 PRMT7Q9NVM4 692 aaPredicted RBP27.58■■■□□ 2.01
TMEM54-205ENST00000475208 SF3B1O75533 1304 aaKnown RBP eCLIP27.58■■■□□ 2.01
TMEM54-205ENST00000475208 MTCL1Q9Y4B5 1905 aaKnown RBP27.57■■■□□ 2
TMEM54-205ENST00000475208 DOCK8Q8NF50 2099 aa27.57■■■□□ 2
TMEM54-205ENST00000475208 JAK2O60674 1132 aa27.57■■■□□ 2
TMEM54-205ENST00000475208 SPATA31C1P0DKV0 1188 aa27.57■■■□□ 2
TMEM54-205ENST00000475208 ANGPT1Q15389 498 aa27.57■■■□□ 2
TMEM54-205ENST00000475208 ZBTB8OSQ8IWT0 167 aa27.57■■■□□ 2
TMEM54-205ENST00000475208 MCPH1Q8NEM0 835 aa27.57■■■□□ 2
TMEM54-205ENST00000475208 NXPE3Q969Y0 559 aa27.57■■■□□ 2
TMEM54-205ENST00000475208 PAAF1Q9BRP4 392 aa27.57■■■□□ 2
TMEM54-205ENST00000475208 PRKD2Q9BZL6 878 aa27.57■■■□□ 2
TMEM54-205ENST00000475208 RIF1Q5UIP0 2472 aaKnown RBP27.56■■■□□ 2
TMEM54-205ENST00000475208 KRBA1A5PL33 1030 aa27.56■■■□□ 2
TMEM54-205ENST00000475208 STK25O00506 426 aa27.56■■■□□ 2
TMEM54-205ENST00000475208 SRFP11831 508 aa27.56■■■□□ 2
TMEM54-205ENST00000475208 RFX1P22670 979 aa27.56■■■□□ 2
TMEM54-205ENST00000475208 TUSC3Q13454 348 aa27.56■■■□□ 2
TMEM54-205ENST00000475208 RTP2Q5QGT7 225 aa27.56■■■□□ 2
TMEM54-205ENST00000475208 CDCA2Q69YH5 1023 aaPredicted RBP27.56■■■□□ 2
TMEM54-205ENST00000475208 PRSS55Q6UWB4 352 aaPredicted RBP27.56■■■□□ 2
TMEM54-205ENST00000475208 HASPINQ8TF76 798 aa27.56■■■□□ 2
TMEM54-205ENST00000475208 CA14Q9ULX7 337 aa27.56■■■□□ 2
TMEM54-205ENST00000475208 CASTOR2A6NHX0 329 aa27.55■■■□□ 2
TMEM54-205ENST00000475208 FZD8Q9H461 694 aa27.55■■■□□ 2
TMEM54-205ENST00000475208 TUFT1Q9NNX1 390 aa27.55■■■□□ 2
TMEM54-205ENST00000475208 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP27.55■■■□□ 2
TMEM54-205ENST00000475208 FAM186AA6NE01 2351 aa27.55■■■□□ 2
TMEM54-205ENST00000475208 TTLL13PA6NNM8 815 aa27.54■■■□□ 2
TMEM54-205ENST00000475208 MED24O75448 989 aa27.54■■■□□ 2
TMEM54-205ENST00000475208 ZMYND10O75800 440 aa27.54■■■□□ 2
TMEM54-205ENST00000475208 LAMP2P13473 410 aa27.54■■■□□ 2
TMEM54-205ENST00000475208 ATP2B1P20020 1258 aa27.54■■■□□ 2
TMEM54-205ENST00000475208 MCM7P33993 719 aa27.54■■■□□ 2
TMEM54-205ENST00000475208 FAM187BQ17R55 369 aa27.54■■■□□ 2
TMEM54-205ENST00000475208 TMEM132AQ24JP5 1023 aa27.54■■■□□ 2
TMEM54-205ENST00000475208 POTEGQ6S5H5 508 aa27.54■■■□□ 2
TMEM54-205ENST00000475208 CATSPER3Q86XQ3 398 aa27.54■■■□□ 2
TMEM54-205ENST00000475208 PDZD7Q9H5P4 517 aa27.54■■■□□ 2
TMEM54-205ENST00000475208 N4BP3O15049 544 aa27.53■■■□□ 2
TMEM54-205ENST00000475208 KIF4AO95239 1232 aa27.53■■■□□ 2
TMEM54-205ENST00000475208 BSNDQ8WZ55 320 aa27.53■■■□□ 2
TMEM54-205ENST00000475208 TTPALQ9BTX7 342 aa27.53■■■□□ 2
TMEM54-205ENST00000475208 C2orf40Q9H1Z8 148 aa27.53■■■□□ 2
TMEM54-205ENST00000475208 TBC1D17Q9HA65 648 aa27.53■■■□□ 2
TMEM54-205ENST00000475208 SNTG2Q9NY99 539 aa27.53■■■□□ 2
TMEM54-205ENST00000475208 FBXW11Q9UKB1 542 aa27.53■■■□□ 2
TMEM54-205ENST00000475208 PTGESO14684 152 aa27.52■■■□□ 2
TMEM54-205ENST00000475208 RECQL4O94761 1208 aa27.52■■■□□ 2
TMEM54-205ENST00000475208 HTR4Q13639 388 aa27.52■■■□□ 2
TMEM54-205ENST00000475208 FAM171A1Q5VUB5 890 aa27.52■■■□□ 2
TMEM54-205ENST00000475208 GPR152Q8TDT2 470 aa27.52■■■□□ 2
TMEM54-205ENST00000475208 NACC1Q96RE7 527 aa27.52■■■□□ 2
TMEM54-205ENST00000475208 ANHXE9PGG2 379 aa27.51■■□□□ 1.99
TMEM54-205ENST00000475208 PRKCBP05771 671 aa27.51■■□□□ 1.99
TMEM54-205ENST00000475208 THP07101 528 aa27.51■■□□□ 1.99
TMEM54-205ENST00000475208 FSHRP23945 695 aa27.51■■□□□ 1.99
TMEM54-205ENST00000475208 PRPF4BQ13523 1007 aaKnown RBP27.51■■□□□ 1.99
TMEM54-205ENST00000475208 PSMD5Q16401 504 aa27.51■■□□□ 1.99
TMEM54-205ENST00000475208 MAPK6Q16659 721 aa27.51■■□□□ 1.99
TMEM54-205ENST00000475208 LIN9Q5TKA1 542 aa27.51■■□□□ 1.99
TMEM54-205ENST00000475208 CEP57Q86XR8 500 aa27.51■■□□□ 1.99
TMEM54-205ENST00000475208 ST13P5Q8NFI4 369 aaPredicted RBP27.51■■□□□ 1.99
TMEM54-205ENST00000475208 PIK3R5Q8WYR1 880 aa27.51■■□□□ 1.99
TMEM54-205ENST00000475208 CLSTN3Q9BQT9 956 aa27.51■■□□□ 1.99
TMEM54-205ENST00000475208 POLR3CQ9BUI4 534 aaPredicted RBP27.51■■□□□ 1.99
TMEM54-205ENST00000475208 CXCL16Q9H2A7 254 aa27.51■■□□□ 1.99
TMEM54-205ENST00000475208 NUMBLQ9Y6R0 609 aa27.51■■□□□ 1.99
TMEM54-205ENST00000475208 LIG1P18858 919 aa27.5■■□□□ 1.99
TMEM54-205ENST00000475208 PADI6Q6TGC4 694 aa27.5■■□□□ 1.99
TMEM54-205ENST00000475208 NOSTRINQ8IVI9 506 aa27.5■■□□□ 1.99
TMEM54-205ENST00000475208 ADSSL1Q8N142 457 aa27.5■■□□□ 1.99
TMEM54-205ENST00000475208 LNX1Q8TBB1 728 aaPredicted RBP27.5■■□□□ 1.99
TMEM54-205ENST00000475208 ADPGKQ9BRR6 497 aa27.5■■□□□ 1.99
TMEM54-205ENST00000475208 ARHGEF3Q9NR81 526 aa27.5■■□□□ 1.99
TMEM54-205ENST00000475208 USP20Q9Y2K6 914 aa27.5■■□□□ 1.99
TMEM54-205ENST00000475208 SPTBN4Q9H254 2564 aa27.5■■□□□ 1.99
TMEM54-205ENST00000475208 ARHGEF35A5YM69 484 aa27.49■■□□□ 1.99
TMEM54-205ENST00000475208 GUCY1B3Q02153 619 aa27.49■■□□□ 1.99
TMEM54-205ENST00000475208 ST3GAL1Q11201 340 aa27.49■■□□□ 1.99
TMEM54-205ENST00000475208 GRASPQ7Z6J2 395 aaPredicted RBP27.49■■□□□ 1.99
TMEM54-205ENST00000475208 ERMNQ8TAM6 284 aa27.49■■□□□ 1.99
TMEM54-205ENST00000475208 DEPTORQ8TB45 409 aa27.49■■□□□ 1.99
TMEM54-205ENST00000475208 CCDC113Q9H0I3 377 aa27.49■■□□□ 1.99
TMEM54-205ENST00000475208 ACKR2O00590 384 aa27.48■■□□□ 1.99
TMEM54-205ENST00000475208 EDN1P05305 212 aa27.48■■□□□ 1.99
TMEM54-205ENST00000475208 HNRNPA1P09651 372 aaKnown RBP eCLIP27.48■■□□□ 1.99
TMEM54-205ENST00000475208 CYP11B2P19099 503 aa27.48■■□□□ 1.99
TMEM54-205ENST00000475208 RPA1P27694 616 aa27.48■■□□□ 1.99
TMEM54-205ENST00000475208 NAMPTP43490 491 aa27.48■■□□□ 1.99
TMEM54-205ENST00000475208 NEK4P51957 841 aa27.48■■□□□ 1.99
TMEM54-205ENST00000475208 NTHL1P78549 312 aa27.48■■□□□ 1.99
TMEM54-205ENST00000475208 ELAVL2Q12926 359 aaKnown RBP27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms