RNA–Protein interactions for RNA: ENST00000475184.5

ITGB1-211, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-211ENST00000475184 SF3B1O75533 1304 aaKnown RBP eCLIP17.7■□□□□ 0.422e-9■■■■■ 80.4
ITGB1-211ENST00000475184 ZMYM2Q9UBW7 1377 aa17.69■□□□□ 0.42
ITGB1-211ENST00000475184 TADA2AO75478 443 aa17.69■□□□□ 0.42
ITGB1-211ENST00000475184 HNRNPA1P09651 372 aaKnown RBP eCLIP17.69■□□□□ 0.42
ITGB1-211ENST00000475184 RPS6KB1P23443 525 aa17.69■□□□□ 0.42
ITGB1-211ENST00000475184 AKAP5P24588 427 aa17.69■□□□□ 0.42
ITGB1-211ENST00000475184 PDIA3P30101 505 aaKnown RBP17.69■□□□□ 0.42
ITGB1-211ENST00000475184 MAGEA9P43362 315 aa17.69■□□□□ 0.42
ITGB1-211ENST00000475184 IRX6P78412 446 aaPredicted RBP17.69■□□□□ 0.42
ITGB1-211ENST00000475184 PFKPQ01813 784 aa17.69■□□□□ 0.42
ITGB1-211ENST00000475184 GRIK3Q13003 919 aa17.69■□□□□ 0.42
ITGB1-211ENST00000475184 MXD4Q14582 209 aaPredicted RBP17.69■□□□□ 0.42
ITGB1-211ENST00000475184 NPY5RQ15761 445 aa17.69■□□□□ 0.42
ITGB1-211ENST00000475184 INF2Q27J81 1249 aa17.69■□□□□ 0.42
ITGB1-211ENST00000475184 SLC44A4Q53GD3 710 aa17.69■□□□□ 0.42
ITGB1-211ENST00000475184 XKR9Q5GH70 373 aa17.69■□□□□ 0.42
ITGB1-211ENST00000475184 RTP2Q5QGT7 225 aa17.69■□□□□ 0.42
ITGB1-211ENST00000475184 OTUD6AQ7L8S5 288 aa17.69■□□□□ 0.42
ITGB1-211ENST00000475184 RABGGTAQ92696 567 aa17.69■□□□□ 0.42
ITGB1-211ENST00000475184 KCNB2Q92953 911 aa17.69■□□□□ 0.42
ITGB1-211ENST00000475184 SECISBP2LQ93073 1101 aaKnown RBP17.69■□□□□ 0.42
ITGB1-211ENST00000475184 FAM20AQ96MK3 541 aa17.69■□□□□ 0.42
ITGB1-211ENST00000475184 MTRQ99707 1265 aa17.69■□□□□ 0.42
ITGB1-211ENST00000475184 KCNMB3Q9NPA1 279 aa17.69■□□□□ 0.42
ITGB1-211ENST00000475184 SMG5Q9UPR3 1016 aaKnown RBP17.69■□□□□ 0.42
ITGB1-211ENST00000475184 FAM170BA6NMN3 283 aa17.68■□□□□ 0.42
ITGB1-211ENST00000475184 C8AP07357 584 aa17.68■□□□□ 0.42
ITGB1-211ENST00000475184 ARF4P18085 180 aaPredicted RBP17.68■□□□□ 0.42
ITGB1-211ENST00000475184 HOXA9P31269 272 aa17.68■□□□□ 0.42
ITGB1-211ENST00000475184 MBTD1Q05BQ5 628 aa17.68■□□□□ 0.42
ITGB1-211ENST00000475184 SSRP1Q08945 709 aaKnown RBP17.68■□□□□ 0.42
ITGB1-211ENST00000475184 TFDP1Q14186 410 aa17.68■□□□□ 0.42
ITGB1-211ENST00000475184 HSP90AA2PQ14568 343 aaPredicted RBP17.68■□□□□ 0.42
ITGB1-211ENST00000475184 PPM1LQ5SGD2 360 aa17.68■□□□□ 0.42
ITGB1-211ENST00000475184 RSPO2Q6UXX9 243 aaPredicted RBP17.68■□□□□ 0.42
ITGB1-211ENST00000475184 KRT25Q7Z3Z0 450 aa17.68■□□□□ 0.42
ITGB1-211ENST00000475184 IFNLR1Q8IU57 520 aaPredicted RBP17.68■□□□□ 0.42
ITGB1-211ENST00000475184 ZBTB44Q8NCP5 570 aa17.68■□□□□ 0.42
ITGB1-211ENST00000475184 LTB4R2Q9NPC1 389 aa17.68■□□□□ 0.42
ITGB1-211ENST00000475184 XPNPEP1Q9NQW7 623 aa17.68■□□□□ 0.42
ITGB1-211ENST00000475184 ZSCAN32Q9NX65 697 aa17.68■□□□□ 0.42
ITGB1-211ENST00000475184 RGL1Q9NZL6 768 aa17.68■□□□□ 0.42
ITGB1-211ENST00000475184 CACNG4Q9UBN1 327 aa17.68■□□□□ 0.42
ITGB1-211ENST00000475184 CDV3Q9UKY7 258 aaKnown RBP17.68■□□□□ 0.42
ITGB1-211ENST00000475184 SNX14Q9Y5W7 946 aa17.68■□□□□ 0.42
ITGB1-211ENST00000475184 CCL16O15467 120 aa17.67■□□□□ 0.42
ITGB1-211ENST00000475184 XYLBO75191 536 aa17.67■□□□□ 0.42
ITGB1-211ENST00000475184 DEXIO95424 95 aa17.67■□□□□ 0.42
ITGB1-211ENST00000475184 CD72P21854 359 aa17.67■□□□□ 0.42
ITGB1-211ENST00000475184 ATXN1P54253 815 aaKnown RBP17.67■□□□□ 0.42
ITGB1-211ENST00000475184 EVCP57679 992 aa17.67■□□□□ 0.42
ITGB1-211ENST00000475184 LMNB2Q03252 620 aa17.67■□□□□ 0.42
ITGB1-211ENST00000475184 AMHR2Q16671 573 aa17.67■□□□□ 0.42
ITGB1-211ENST00000475184 GALNT17Q6IS24 598 aa17.67■□□□□ 0.42
ITGB1-211ENST00000475184 ITFG1Q8TB96 612 aa17.67■□□□□ 0.42
ITGB1-211ENST00000475184 PIK3R5Q8WYR1 880 aa17.67■□□□□ 0.42
ITGB1-211ENST00000475184 KXD1Q9BQD3 176 aa17.67■□□□□ 0.42
ITGB1-211ENST00000475184 CLSTN3Q9BQT9 956 aa17.67■□□□□ 0.42
ITGB1-211ENST00000475184 TTPALQ9BTX7 342 aa17.67■□□□□ 0.42
ITGB1-211ENST00000475184 EPC1Q9H2F5 836 aa17.67■□□□□ 0.42
ITGB1-211ENST00000475184 KLK14Q9P0G3 267 aa17.67■□□□□ 0.42
ITGB1-211ENST00000475184 POLIQ9UNA4 740 aa17.67■□□□□ 0.42
ITGB1-211ENST00000475184 PRR5-ARHGAP8B1AHC4 643 aa17.66■□□□□ 0.42
ITGB1-211ENST00000475184 ZBTB39O15060 712 aa17.66■□□□□ 0.42
ITGB1-211ENST00000475184 B4GALT5O43286 388 aa17.66■□□□□ 0.42
ITGB1-211ENST00000475184 CDC45O75419 566 aa17.66■□□□□ 0.42
ITGB1-211ENST00000475184 NPTXRO95502 500 aa17.66■□□□□ 0.42
ITGB1-211ENST00000475184 ARHGAP8P85298 464 aa17.66■□□□□ 0.42
ITGB1-211ENST00000475184 POU5F1BQ06416 359 aa17.66■□□□□ 0.42
ITGB1-211ENST00000475184 CAPSQ13938 189 aa17.66■□□□□ 0.42
ITGB1-211ENST00000475184 EPHA7Q15375 998 aa17.66■□□□□ 0.42
ITGB1-211ENST00000475184 PSMD5Q16401 504 aa17.66■□□□□ 0.42
ITGB1-211ENST00000475184 ZBTB41Q5SVQ8 909 aa17.66■□□□□ 0.42
ITGB1-211ENST00000475184 SLC27A1Q6PCB7 646 aa17.66■□□□□ 0.42
ITGB1-211ENST00000475184 FAM177A1Q8N128 213 aaPredicted RBP17.66■□□□□ 0.42
ITGB1-211ENST00000475184 HASPINQ8TF76 798 aa17.66■□□□□ 0.42
ITGB1-211ENST00000475184 NELL1Q92832 810 aa17.66■□□□□ 0.42
ITGB1-211ENST00000475184 PAAF1Q9BRP4 392 aa17.66■□□□□ 0.42
ITGB1-211ENST00000475184 PHF20Q9BVI0 1012 aa17.66■□□□□ 0.42
ITGB1-211ENST00000475184 ZSWIM4Q9H7M6 989 aa17.66■□□□□ 0.42
ITGB1-211ENST00000475184 LILRB5O75023 590 aa17.65■□□□□ 0.42
ITGB1-211ENST00000475184 GCFC2P16383 781 aaKnown RBP17.65■□□□□ 0.42
ITGB1-211ENST00000475184 TARSP26639 723 aaKnown RBP17.65■□□□□ 0.42
ITGB1-211ENST00000475184 HSPA4P34932 840 aa17.65■□□□□ 0.42
ITGB1-211ENST00000475184 CYP4A11Q02928 519 aa17.65■□□□□ 0.42
ITGB1-211ENST00000475184 TUSC3Q13454 348 aa17.65■□□□□ 0.42
ITGB1-211ENST00000475184 CTTNQ14247 550 aaKnown RBP17.65■□□□□ 0.42
ITGB1-211ENST00000475184 FAM171A1Q5VUB5 890 aa17.65■□□□□ 0.42
ITGB1-211ENST00000475184 NCAPH2Q6IBW4 605 aa17.65■□□□□ 0.42
ITGB1-211ENST00000475184 PPP4R3AQ6IN85 833 aa17.65■□□□□ 0.42
ITGB1-211ENST00000475184 TPRG1Q6ZUI0 275 aa17.65■□□□□ 0.42
ITGB1-211ENST00000475184 CDR2LQ86X02 465 aaPredicted RBP17.65■□□□□ 0.42
ITGB1-211ENST00000475184 CEP57Q86XR8 500 aa17.65■□□□□ 0.42
ITGB1-211ENST00000475184 NPAS3Q8IXF0 933 aa17.65■□□□□ 0.42
ITGB1-211ENST00000475184 LNX1Q8TBB1 728 aaPredicted RBP17.65■□□□□ 0.42
ITGB1-211ENST00000475184 SLC7A14Q8TBB6 771 aa17.65■□□□□ 0.42
ITGB1-211ENST00000475184 ASAP3Q8TDY4 903 aa17.65■□□□□ 0.42
ITGB1-211ENST00000475184 HAS1Q92839 578 aa17.65■□□□□ 0.42
ITGB1-211ENST00000475184 CLDN23Q96B33 292 aa17.65■□□□□ 0.42
ITGB1-211ENST00000475184 DYDC2Q96IM9 177 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms