RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 ERMP1Q7Z2K6 904 aa15.53■□□□□ 0.08
CCDC78-209ENST00000474647 NXPE3Q969Y0 559 aa15.53■□□□□ 0.08
CCDC78-209ENST00000474647 PRKD2Q9BZL6 878 aa15.53■□□□□ 0.08
CCDC78-209ENST00000474647 POLR3FQ9H1D9 316 aaPredicted RBP15.53■□□□□ 0.08
CCDC78-209ENST00000474647 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.53■□□□□ 0.08
CCDC78-209ENST00000474647 FNIP2Q9P278 1114 aa15.53■□□□□ 0.08
CCDC78-209ENST00000474647 CACNA1AO00555 2505 aa15.52■□□□□ 0.08
CCDC78-209ENST00000474647 SF3B1O75533 1304 aaKnown RBP eCLIP15.52■□□□□ 0.08
CCDC78-209ENST00000474647 LRRIQ4A6NIV6 560 aa15.52■□□□□ 0.08
CCDC78-209ENST00000474647 USO1O60763 962 aaKnown RBP15.52■□□□□ 0.08
CCDC78-209ENST00000474647 TADA2AO75478 443 aa15.52■□□□□ 0.08
CCDC78-209ENST00000474647 LMNAP02545 664 aaKnown RBP15.52■□□□□ 0.08
CCDC78-209ENST00000474647 GLRA2P23416 452 aa15.52■□□□□ 0.08
CCDC78-209ENST00000474647 KRT2P35908 639 aa15.52■□□□□ 0.08
CCDC78-209ENST00000474647 NR5A1Q13285 461 aa15.52■□□□□ 0.08
CCDC78-209ENST00000474647 HTR4Q13639 388 aa15.52■□□□□ 0.08
CCDC78-209ENST00000474647 HSP90AA2PQ14568 343 aaPredicted RBP15.52■□□□□ 0.08
CCDC78-209ENST00000474647 TMEM132AQ24JP5 1023 aa15.52■□□□□ 0.08
CCDC78-209ENST00000474647 RTP2Q5QGT7 225 aa15.52■□□□□ 0.08
CCDC78-209ENST00000474647 MAEAQ7L5Y9 396 aa15.52■□□□□ 0.08
CCDC78-209ENST00000474647 CEP57Q86XR8 500 aa15.52■□□□□ 0.08
CCDC78-209ENST00000474647 IFNLR1Q8IU57 520 aaPredicted RBP15.52■□□□□ 0.08
CCDC78-209ENST00000474647 GSTCDQ8NEC7 633 aa15.52■□□□□ 0.08
CCDC78-209ENST00000474647 PAAF1Q9BRP4 392 aa15.52■□□□□ 0.08
CCDC78-209ENST00000474647 TM6SF1Q9BZW5 370 aa15.52■□□□□ 0.08
CCDC78-209ENST00000474647 BRMS1Q9HCU9 246 aa15.52■□□□□ 0.08
CCDC78-209ENST00000474647 PCDHA12Q9UN75 941 aa15.52■□□□□ 0.08
CCDC78-209ENST00000474647 SIT1Q9Y3P8 196 aa15.52■□□□□ 0.08
CCDC78-209ENST00000474647 A0A087WWV3 80 aa15.51■□□□□ 0.07
CCDC78-209ENST00000474647 CASTOR2A6NHX0 329 aa15.51■□□□□ 0.07
CCDC78-209ENST00000474647 ZMYND10O75800 440 aa15.51■□□□□ 0.07
CCDC78-209ENST00000474647 FSHRP23945 695 aa15.51■□□□□ 0.07
CCDC78-209ENST00000474647 ARL2P36404 184 aa15.51■□□□□ 0.07
CCDC78-209ENST00000474647 FOSBP53539 338 aa15.51■□□□□ 0.07
CCDC78-209ENST00000474647 CALCRLQ16602 461 aa15.51■□□□□ 0.07
CCDC78-209ENST00000474647 LIN9Q5TKA1 542 aa15.51■□□□□ 0.07
CCDC78-209ENST00000474647 DCLRE1AQ6PJP8 1040 aa15.51■□□□□ 0.07
CCDC78-209ENST00000474647 ZC3H14Q6PJT7 736 aaKnown RBP15.51■□□□□ 0.07
CCDC78-209ENST00000474647 GRASPQ7Z6J2 395 aaPredicted RBP15.51■□□□□ 0.07
CCDC78-209ENST00000474647 KIAA2013Q8IYS2 634 aa15.51■□□□□ 0.07
CCDC78-209ENST00000474647 PIGOQ8TEQ8 1089 aa15.51■□□□□ 0.07
CCDC78-209ENST00000474647 FOXQ1Q9C009 403 aa15.51■□□□□ 0.07
CCDC78-209ENST00000474647 ANKEF1Q9NU02 776 aa15.51■□□□□ 0.07
CCDC78-209ENST00000474647 ORC3Q9UBD5 711 aaPredicted RBP15.51■□□□□ 0.07
CCDC78-209ENST00000474647 POLIQ9UNA4 740 aa15.51■□□□□ 0.07
CCDC78-209ENST00000474647 RALGAPA1Q6GYQ0 2036 aa15.51■□□□□ 0.07
CCDC78-209ENST00000474647 ZMYM2Q9UBW7 1377 aa15.5■□□□□ 0.07
CCDC78-209ENST00000474647 KIF4AO95239 1232 aa15.5■□□□□ 0.07
CCDC78-209ENST00000474647 TXKP42681 527 aa15.5■□□□□ 0.07
CCDC78-209ENST00000474647 RARRES1P49788 294 aa15.5■□□□□ 0.07
CCDC78-209ENST00000474647 NTHL1P78549 312 aa15.5■□□□□ 0.07
CCDC78-209ENST00000474647 POU5F1BQ06416 359 aa15.5■□□□□ 0.07
CCDC78-209ENST00000474647 TUSC3Q13454 348 aa15.5■□□□□ 0.07
CCDC78-209ENST00000474647 PSMD5Q16401 504 aa15.5■□□□□ 0.07
CCDC78-209ENST00000474647 PPM1LQ5SGD2 360 aa15.5■□□□□ 0.07
CCDC78-209ENST00000474647 FAM171A1Q5VUB5 890 aa15.5■□□□□ 0.07
CCDC78-209ENST00000474647 PHLDB3Q6NSJ2 640 aa15.5■□□□□ 0.07
CCDC78-209ENST00000474647 LILRA6Q6PI73 481 aa15.5■□□□□ 0.07
CCDC78-209ENST00000474647 POTEGQ6S5H5 508 aa15.5■□□□□ 0.07
CCDC78-209ENST00000474647 WASF1Q92558 559 aa15.5■□□□□ 0.07
CCDC78-209ENST00000474647 FGF14Q92915 247 aa15.5■□□□□ 0.07
CCDC78-209ENST00000474647 NFKBIZQ9BYH8 718 aa15.5■□□□□ 0.07
CCDC78-209ENST00000474647 SEMA4AQ9H3S1 761 aa15.5■□□□□ 0.07
CCDC78-209ENST00000474647 TTC12Q9H892 705 aaPredicted RBP15.5■□□□□ 0.07
CCDC78-209ENST00000474647 GPRC5CQ9NQ84 441 aa15.5■□□□□ 0.07
CCDC78-209ENST00000474647 FBXW11Q9UKB1 542 aa15.5■□□□□ 0.07
CCDC78-209ENST00000474647 TPCN1Q9ULQ1 816 aa15.5■□□□□ 0.07
CCDC78-209ENST00000474647 OTOGLQ3ZCN5 2332 aa15.49■□□□□ 0.07
CCDC78-209ENST00000474647 ANK1P16157 1881 aa15.49■□□□□ 0.07
CCDC78-209ENST00000474647 A0A1B0GUA9 196 aa15.49■□□□□ 0.07
CCDC78-209ENST00000474647 POTEMA6NI47 508 aa15.49■□□□□ 0.07
CCDC78-209ENST00000474647 ANHXE9PGG2 379 aa15.49■□□□□ 0.07
CCDC78-209ENST00000474647 CCL16O15467 120 aa15.49■□□□□ 0.07
CCDC78-209ENST00000474647 EPB41L2O43491 1005 aaKnown RBP15.49■□□□□ 0.07
CCDC78-209ENST00000474647 NEMFO60524 1076 aa15.49■□□□□ 0.07
CCDC78-209ENST00000474647 PFKFB2O60825 505 aa15.49■□□□□ 0.07
CCDC78-209ENST00000474647 LYPLA2O95372 231 aa15.49■□□□□ 0.07
CCDC78-209ENST00000474647 C1RP00736 705 aa15.49■□□□□ 0.07
CCDC78-209ENST00000474647 C8AP07357 584 aa15.49■□□□□ 0.07
CCDC78-209ENST00000474647 SP9P0CG40 484 aa15.49■□□□□ 0.07
CCDC78-209ENST00000474647 LIG1P18858 919 aa15.49■□□□□ 0.07
CCDC78-209ENST00000474647 PARM1Q6UWI2 310 aa15.49■□□□□ 0.07
CCDC78-209ENST00000474647 C1orf210Q8IVY1 113 aa15.49■□□□□ 0.07
CCDC78-209ENST00000474647 ZBTB8OSQ8IWT0 167 aa15.49■□□□□ 0.07
CCDC78-209ENST00000474647 GPR65Q8IYL9 337 aa15.49■□□□□ 0.07
CCDC78-209ENST00000474647 PJA1Q8NG27 643 aa15.49■□□□□ 0.07
CCDC78-209ENST00000474647 HSD17B14Q9BPX1 270 aa15.49■□□□□ 0.07
CCDC78-209ENST00000474647 TTPALQ9BTX7 342 aa15.49■□□□□ 0.07
CCDC78-209ENST00000474647 RPP25Q9BUL9 199 aaKnown RBP15.49■□□□□ 0.07
CCDC78-209ENST00000474647 SLC2A4RGQ9NR83 387 aa15.49■□□□□ 0.07
CCDC78-209ENST00000474647 LRRN2O75325 713 aa15.48■□□□□ 0.07
CCDC78-209ENST00000474647 PAPLNO95428 1278 aa15.48■□□□□ 0.07
CCDC78-209ENST00000474647 CTDNEP1O95476 244 aa15.48■□□□□ 0.07
CCDC78-209ENST00000474647 GPC5P78333 572 aa15.48■□□□□ 0.07
CCDC78-209ENST00000474647 RMDN1Q96DB5 314 aa15.48■□□□□ 0.07
CCDC78-209ENST00000474647 PRMT7Q9NVM4 692 aaPredicted RBP15.48■□□□□ 0.07
CCDC78-209ENST00000474647 SNTG2Q9NY99 539 aa15.48■□□□□ 0.07
CCDC78-209ENST00000474647 DLGAP2Q9P1A6 1054 aa15.48■□□□□ 0.07
CCDC78-209ENST00000474647 CDH7Q9ULB5 785 aa15.48■□□□□ 0.07
CCDC78-209ENST00000474647 ZFP37Q9Y6Q3 630 aaPredicted RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms