RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 RINT1Q6NUQ1 792 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 CYP26C1Q6V0L0 522 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 C1orf186Q6ZWK4 172 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 MICAL3Q7RTP6 2002 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 HERC6Q8IVU3 1022 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 SLC17A8Q8NDX2 589 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 ASAP3Q8TDY4 903 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 RAD54LQ92698 747 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 CCDC51Q96ER9 411 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 NLRP4Q96MN2 994 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 SH2D3AQ9BRG2 576 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 FDXACB1Q9BRP7 624 aaPredicted RBP4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 CDHR5Q9HBB8 845 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 RGS18Q9NS28 235 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 KBTBD4Q9NVX7 518 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 ODF2LQ9ULJ1 636 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 ST3GAL5Q9UNP4 418 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 GINS2Q9Y248 185 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 NOC2LQ9Y3T9 749 aaKnown RBP4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 ITIH6Q6UXX5 1313 aa4.55□□□□□ -1.68
GAPVD1-216ENST00000474637 ENPP3O14638 875 aa4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 HOXA2O43364 376 aa4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 RHOBTB3O94955 611 aa4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 SSBP05455 408 aaKnown RBP eCLIP4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 SRGAP2CP0DJJ0 459 aa4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 GLRA2P23416 452 aa4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 RAB27AP51159 221 aa4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 EFNA5P52803 228 aa4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 SLC12A3P55017 1021 aa4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 PTENP60484 403 aa4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 AMPD3Q01432 767 aa4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 STK4Q13043 487 aa4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 DMP1Q13316 513 aaPredicted RBP4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 DRP2Q13474 957 aa4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 CAPSQ13938 189 aa4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 DSC3Q14574 896 aa4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 ZSCAN26Q16670 478 aa4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 CDCA2Q69YH5 1023 aaPredicted RBP4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 CC2D1AQ6P1N0 951 aaPredicted RBP4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 SV2BQ7L1I2 683 aa4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 CATSPER4Q7RTX7 472 aa4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 APBB1IPQ7Z5R6 666 aaPredicted RBP4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 FAM228AQ86W67 206 aa4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 NPAS4Q8IUM7 802 aa4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 SLC35F6Q8N357 371 aa4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 GPATCH11Q8N954 259 aa4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 RNF149Q8NC42 400 aa4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 OR8K1Q8NGG5 319 aa4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 DEPTORQ8TB45 409 aa4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 LARP4BQ92615 738 aaKnown RBP4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 PPP1R16BQ96T49 567 aa4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 RAD9AQ99638 391 aa4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 ZBED2Q9BTP6 218 aa4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 ELAC1Q9H777 363 aaKnown RBP4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 AGO3Q9H9G7 860 aaKnown RBP4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 BMP2KQ9NSY1 1161 aaPredicted RBP4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 PRMT7Q9NVM4 692 aaPredicted RBP4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 LRFN2Q9ULH4 789 aa4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 GUCA1BQ9UMX6 200 aa4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 LUC7L2Q9Y383 392 aaKnown RBP4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 EPN1Q9Y6I3 576 aaPredicted RBP4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 COL4A6Q14031 1691 aa4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 CTAGE9A4FU28 777 aa4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 CARNS1A5YM72 827 aa4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 LRRIQ4A6NIV6 560 aa4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 PSMA7O14818 248 aa4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 HIP1RO75146 1068 aa4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 TBCAO75347 108 aaKnown RBP4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 SASH3O75995 380 aa4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 ERLIN2O94905 339 aa4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 KRT18P05783 430 aaKnown RBP4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 NOP2P46087 812 aaKnown RBP4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 SMTNP53814 917 aa4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 NFX1Q12986 1120 aaKnown RBP4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 STIM1Q13586 685 aa4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 KCNB1Q14721 858 aa4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 FAM187BQ17R55 369 aa4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 TCTN1Q2MV58 587 aa4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 ANKRD40Q6AI12 368 aa4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 SLC24A5Q71RS6 500 aa4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 KCNK18Q7Z418 384 aa4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 GPBP1Q86WP2 473 aa4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 CSGALNACT2Q8N6G5 542 aa4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 ZNF507Q8TCN5 953 aa4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 TMEM40Q8WWA1 233 aa4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 SPIRE2Q8WWL2 714 aa4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 RABGGTAQ92696 567 aa4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 GOLGA1Q92805 767 aa4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 HPS3Q969F9 1004 aa4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 TOP1MTQ969P6 601 aa4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 DUSP9Q99956 384 aaKnown RBP4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 TUBGCP2Q9BSJ2 902 aa4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 TRAIPQ9BWF2 469 aa4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 TMEM134Q9H6X4 195 aa4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 IFT122Q9HBG6 1241 aa4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 BLOC1S4Q9NUP1 217 aa4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 AGPAT5Q9NUQ2 364 aa4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 CXXC1Q9P0U4 656 aaPredicted RBP4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 CDC23Q9UJX2 597 aa4.54□□□□□ -1.68
GAPVD1-216ENST00000474637 TFR2Q9UP52 801 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms