RNA–Protein interactions for RNA: ENST00000473480.5

A1CF-209, Transcript of APOBEC1 complementation factor, humanhuman

TSL 3

Gene A1CF, Length 813 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-209ENST00000473480 RTEL1Q9NZ71 1219 aa8.74□□□□□ -1.01
A1CF-209ENST00000473480 WASF3Q9UPY6 502 aa8.74□□□□□ -1.01
A1CF-209ENST00000473480 COL3A1P02461 1466 aaPredicted RBP8.74□□□□□ -1.01
A1CF-209ENST00000473480 ADGRA2Q96PE1 1338 aa8.74□□□□□ -1.01
A1CF-209ENST00000473480 DUOX1Q9NRD9 1551 aa8.73□□□□□ -1.01
A1CF-209ENST00000473480 TCF20Q9UGU0 1960 aaKnown RBP8.73□□□□□ -1.01
A1CF-209ENST00000473480 ZDBF2Q9HCK1 2354 aa8.73□□□□□ -1.01
A1CF-209ENST00000473480 KRTAP4-8A0A0G2JLE6 195 aa8.73□□□□□ -1.01
A1CF-209ENST00000473480 A0A0G2JLL6 359 aaPredicted RBP8.73□□□□□ -1.01
A1CF-209ENST00000473480 ERVV-1B6SEH8 477 aa8.73□□□□□ -1.01
A1CF-209ENST00000473480 WNT10BO00744 389 aa8.73□□□□□ -1.01
A1CF-209ENST00000473480 AMY2AP04746 511 aa8.73□□□□□ -1.01
A1CF-209ENST00000473480 KRT15P19012 456 aa8.73□□□□□ -1.01
A1CF-209ENST00000473480 AMY2BP19961 511 aa8.73□□□□□ -1.01
A1CF-209ENST00000473480 PPP2R1AP30153 589 aa8.73□□□□□ -1.01
A1CF-209ENST00000473480 SQSTM1Q13501 440 aa8.73□□□□□ -1.01
A1CF-209ENST00000473480 FIGNQ5HY92 759 aa8.73□□□□□ -1.01
A1CF-209ENST00000473480 FAM26FQ5R3K3 315 aa8.73□□□□□ -1.01
A1CF-209ENST00000473480 SUSD4Q5VX71 490 aa8.73□□□□□ -1.01
A1CF-209ENST00000473480 PPP1R42Q7Z4L9 355 aa8.73□□□□□ -1.01
A1CF-209ENST00000473480 PROSER1Q86XN7 944 aa8.73□□□□□ -1.01
A1CF-209ENST00000473480 PTRH1Q86Y79 214 aaKnown RBP8.73□□□□□ -1.01
A1CF-209ENST00000473480 OPTNQ96CV9 577 aa8.73□□□□□ -1.01
A1CF-209ENST00000473480 SCLYQ96I15 445 aa8.73□□□□□ -1.01
A1CF-209ENST00000473480 C20orf173Q96LM9 149 aa8.73□□□□□ -1.01
A1CF-209ENST00000473480 KCNH6Q9H252 994 aa8.73□□□□□ -1.01
A1CF-209ENST00000473480 PIF1Q9H611 641 aa8.73□□□□□ -1.01
A1CF-209ENST00000473480 DLL4Q9NR61 685 aa8.73□□□□□ -1.01
A1CF-209ENST00000473480 RBPJLQ9UBG7 517 aa8.73□□□□□ -1.01
A1CF-209ENST00000473480 ATP23Q9Y6H3 246 aa8.73□□□□□ -1.01
A1CF-209ENST00000473480 BAHCC1Q9P281 2608 aa8.73□□□□□ -1.01
A1CF-209ENST00000473480 CACNA1BQ00975 2339 aa8.72□□□□□ -1.01
A1CF-209ENST00000473480 SCN9AQ15858 1988 aa8.72□□□□□ -1.01
A1CF-209ENST00000473480 SIPA1L3O60292 1781 aaPredicted RBP8.72□□□□□ -1.01
A1CF-209ENST00000473480 TCRBV16S1A1N1A0A5B0 115 aa8.72□□□□□ -1.01
A1CF-209ENST00000473480 ZNF561-AS1K7EIQ3 104 aa8.72□□□□□ -1.01
A1CF-209ENST00000473480 DDX3XO00571 662 aaKnown RBP eCLIP8.72□□□□□ -1.01
A1CF-209ENST00000473480 MAN2B1O00754 1011 aa8.72□□□□□ -1.01
A1CF-209ENST00000473480 NOBOXO60393 691 aa8.72□□□□□ -1.01
A1CF-209ENST00000473480 ENO2P09104 434 aaPredicted RBP8.72□□□□□ -1.01
A1CF-209ENST00000473480 GPTP24298 496 aa8.72□□□□□ -1.01
A1CF-209ENST00000473480 CTGFP29279 349 aa8.72□□□□□ -1.01
A1CF-209ENST00000473480 PRKAR2BP31323 418 aa8.72□□□□□ -1.01
A1CF-209ENST00000473480 GJA4P35212 333 aa8.72□□□□□ -1.01
A1CF-209ENST00000473480 JAM2P57087 298 aa8.72□□□□□ -1.01
A1CF-209ENST00000473480 PRKCZQ05513 592 aa8.72□□□□□ -1.01
A1CF-209ENST00000473480 GRAPQ13588 217 aa8.72□□□□□ -1.01
A1CF-209ENST00000473480 RALBP1Q15311 655 aa8.72□□□□□ -1.01
A1CF-209ENST00000473480 SUPT20HL1Q3ZLR7 823 aa8.72□□□□□ -1.01
A1CF-209ENST00000473480 BTBD8Q5XKL5 378 aa8.72□□□□□ -1.01
A1CF-209ENST00000473480 CD276Q5ZPR3 534 aa8.72□□□□□ -1.01
A1CF-209ENST00000473480 DTX3Q8N9I9 347 aa8.72□□□□□ -1.01
A1CF-209ENST00000473480 GRAPLQ8TC17 118 aaPredicted RBP8.72□□□□□ -1.01
A1CF-209ENST00000473480 PNISRQ8TF01 805 aaKnown RBP8.72□□□□□ -1.01
A1CF-209ENST00000473480 RTF1Q92541 710 aaKnown RBP8.72□□□□□ -1.01
A1CF-209ENST00000473480 CELF4Q9BZC1 486 aaKnown RBP8.72□□□□□ -1.01
A1CF-209ENST00000473480 TRIM39Q9HCM9 518 aa8.72□□□□□ -1.01
A1CF-209ENST00000473480 ZCCHC17Q9NP64 241 aaKnown RBP8.72□□□□□ -1.01
A1CF-209ENST00000473480 POLLQ9UGP5 575 aa8.72□□□□□ -1.01
A1CF-209ENST00000473480 CROTQ9UKG9 612 aa8.72□□□□□ -1.01
A1CF-209ENST00000473480 CFAP54Q96N23 3096 aa8.72□□□□□ -1.01
A1CF-209ENST00000473480 USP34Q70CQ2 3546 aa8.71□□□□□ -1.01
A1CF-209ENST00000473480 ACOT7O00154 380 aa8.71□□□□□ -1.02
A1CF-209ENST00000473480 NPTXRO95502 500 aa8.71□□□□□ -1.02
A1CF-209ENST00000473480 CKMP06732 381 aa8.71□□□□□ -1.02
A1CF-209ENST00000473480 ZNF28P17035 718 aa8.71□□□□□ -1.02
A1CF-209ENST00000473480 PTPN1P18031 435 aaKnown RBP8.71□□□□□ -1.02
A1CF-209ENST00000473480 FNDC3BQ53EP0 1204 aaKnown RBP8.71□□□□□ -1.02
A1CF-209ENST00000473480 SLC10A5Q5PT55 438 aa8.71□□□□□ -1.02
A1CF-209ENST00000473480 AKNAD1Q5T1N1 836 aa8.71□□□□□ -1.02
A1CF-209ENST00000473480 C17orf99Q6UX52 265 aa8.71□□□□□ -1.02
A1CF-209ENST00000473480 TEPSINQ96N21 525 aa8.71□□□□□ -1.02
A1CF-209ENST00000473480 DEFB129Q9H1M3 183 aa8.71□□□□□ -1.02
A1CF-209ENST00000473480 PNNQ9H307 717 aaKnown RBP8.71□□□□□ -1.02
A1CF-209ENST00000473480 L2HGDHQ9H9P8 463 aa8.71□□□□□ -1.02
A1CF-209ENST00000473480 RIC8BQ9NVN3 520 aa8.71□□□□□ -1.02
A1CF-209ENST00000473480 BABAM1Q9NWV8 329 aa8.71□□□□□ -1.02
A1CF-209ENST00000473480 TMEM260Q9NX78 707 aa8.71□□□□□ -1.02
A1CF-209ENST00000473480 COQ6Q9Y2Z9 468 aa8.71□□□□□ -1.02
A1CF-209ENST00000473480 XIRP2A4UGR9 3374 aa8.7□□□□□ -1.02
A1CF-209ENST00000473480 KRT37O76014 449 aa8.7□□□□□ -1.02
A1CF-209ENST00000473480 NTSR2O95665 410 aa8.7□□□□□ -1.02
A1CF-209ENST00000473480 U2AF1L5P0DN76 240 aaPredicted RBP8.7□□□□□ -1.02
A1CF-209ENST00000473480 U2AF1Q01081 240 aaKnown RBP eCLIP8.7□□□□□ -1.02
A1CF-209ENST00000473480 RTP5Q14D33 572 aa8.7□□□□□ -1.02
A1CF-209ENST00000473480 SHHQ15465 462 aa8.7□□□□□ -1.02
A1CF-209ENST00000473480 AAK1Q2M2I8 961 aa8.7□□□□□ -1.02
A1CF-209ENST00000473480 LCE4AQ5TA78 99 aa8.7□□□□□ -1.02
A1CF-209ENST00000473480 MCTP2Q6DN12 878 aa8.7□□□□□ -1.02
A1CF-209ENST00000473480 FGD2Q7Z6J4 655 aa8.7□□□□□ -1.02
A1CF-209ENST00000473480 PLEKHF1Q96S99 279 aa8.7□□□□□ -1.02
A1CF-209ENST00000473480 KANSL2Q9H9L4 492 aa8.7□□□□□ -1.02
A1CF-209ENST00000473480 SMURF1Q9HCE7 757 aa8.7□□□□□ -1.02
A1CF-209ENST00000473480 UBN2Q6ZU65 1347 aa8.7□□□□□ -1.02
A1CF-209ENST00000473480 NUP98P52948 1817 aa8.7□□□□□ -1.02
A1CF-209ENST00000473480 COL1A1P02452 1464 aaPredicted RBP8.7□□□□□ -1.02
A1CF-209ENST00000473480 WDFY4Q6ZS81 3184 aa8.69□□□□□ -1.02
A1CF-209ENST00000473480 FAM90A27PA6NNH2 459 aa8.69□□□□□ -1.02
A1CF-209ENST00000473480 MMP14P50281 582 aa8.69□□□□□ -1.02
A1CF-209ENST00000473480 MLLT6P55198 1093 aaPredicted RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms