RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 CEBPZQ03701 1054 aaKnown RBP24.76■■□□□ 1.55
PTP4A1-203ENST00000473334 TUSC3Q13454 348 aa24.76■■□□□ 1.55
PTP4A1-203ENST00000473334 ZNF568Q3ZCX4 644 aa24.76■■□□□ 1.55
PTP4A1-203ENST00000473334 SYCE2Q6PIF2 218 aa24.76■■□□□ 1.55
PTP4A1-203ENST00000473334 TMEM161BQ8NDZ6 487 aa24.76■■□□□ 1.55
PTP4A1-203ENST00000473334 RAD54LQ92698 747 aa24.76■■□□□ 1.55
PTP4A1-203ENST00000473334 KHSRPQ92945 711 aaKnown RBP eCLIP24.76■■□□□ 1.556e-8■□□□□ 11.3
PTP4A1-203ENST00000473334 TARS2Q9BW92 718 aaKnown RBP24.76■■□□□ 1.55
PTP4A1-203ENST00000473334 EMILIN2Q9BXX0 1053 aa24.76■■□□□ 1.55
PTP4A1-203ENST00000473334 S1PR5Q9H228 398 aa24.76■■□□□ 1.55
PTP4A1-203ENST00000473334 MRPL17Q9NRX2 175 aaKnown RBP24.76■■□□□ 1.55
PTP4A1-203ENST00000473334 LARSQ9P2J5 1176 aaKnown RBP24.76■■□□□ 1.55
PTP4A1-203ENST00000473334 SRPRBQ9Y5M8 271 aaKnown RBP24.76■■□□□ 1.55
PTP4A1-203ENST00000473334 F8W810 466 aa24.75■■□□□ 1.55
PTP4A1-203ENST00000473334 THP07101 528 aa24.75■■□□□ 1.55
PTP4A1-203ENST00000473334 CACNB1Q02641 598 aaPredicted RBP24.75■■□□□ 1.55
PTP4A1-203ENST00000473334 STRN3Q13033 797 aa24.75■■□□□ 1.55
PTP4A1-203ENST00000473334 DHX8Q14562 1220 aaKnown RBP24.75■■□□□ 1.55
PTP4A1-203ENST00000473334 MCM6Q14566 821 aa24.75■■□□□ 1.55
PTP4A1-203ENST00000473334 TPRNQ4KMQ1 711 aa24.75■■□□□ 1.55
PTP4A1-203ENST00000473334 PPFIBP1Q86W92 1011 aa24.75■■□□□ 1.55
PTP4A1-203ENST00000473334 SUSD6Q92537 303 aa24.75■■□□□ 1.55
PTP4A1-203ENST00000473334 USP28Q96RU2 1077 aa24.75■■□□□ 1.55
PTP4A1-203ENST00000473334 REEP2Q9BRK0 252 aa24.75■■□□□ 1.55
PTP4A1-203ENST00000473334 CDT1Q9H211 546 aa24.75■■□□□ 1.55
PTP4A1-203ENST00000473334 PTPRHQ9HD43 1115 aa24.75■■□□□ 1.55
PTP4A1-203ENST00000473334 ADAM28Q9UKQ2 775 aa24.75■■□□□ 1.55
PTP4A1-203ENST00000473334 SSX2IPQ9Y2D8 614 aa24.75■■□□□ 1.55
PTP4A1-203ENST00000473334 MORC2Q9Y6X9 1032 aaPredicted RBP24.75■■□□□ 1.55
PTP4A1-203ENST00000473334 LILRB3O75022 631 aa24.74■■□□□ 1.55
PTP4A1-203ENST00000473334 GRM5P41594 1212 aa24.74■■□□□ 1.55
PTP4A1-203ENST00000473334 SPECC1Q5M775 1068 aa24.74■■□□□ 1.55
PTP4A1-203ENST00000473334 TAS1R1Q7RTX1 841 aa24.74■■□□□ 1.55
PTP4A1-203ENST00000473334 SLC22A17Q8WUG5 538 aa24.74■■□□□ 1.55
PTP4A1-203ENST00000473334 LARP4BQ92615 738 aaKnown RBP24.74■■□□□ 1.55
PTP4A1-203ENST00000473334 EPSTI1Q96J88 318 aa24.74■■□□□ 1.55
PTP4A1-203ENST00000473334 KLHL5Q96PQ7 755 aa24.74■■□□□ 1.55
PTP4A1-203ENST00000473334 CXCL16Q9H2A7 254 aa24.74■■□□□ 1.55
PTP4A1-203ENST00000473334 DZANK1Q9NVP4 752 aa24.74■■□□□ 1.55
PTP4A1-203ENST00000473334 TRIP11Q15643 1979 aa24.74■■□□□ 1.55
PTP4A1-203ENST00000473334 H0YCG3 227 aa24.73■■□□□ 1.55
PTP4A1-203ENST00000473334 MAPTP10636 758 aaKnown RBP24.73■■□□□ 1.55
PTP4A1-203ENST00000473334 PROZP22891 400 aa24.73■■□□□ 1.55
PTP4A1-203ENST00000473334 GLUD2P49448 558 aa24.73■■□□□ 1.55
PTP4A1-203ENST00000473334 NCKAP1LP55160 1127 aa24.73■■□□□ 1.55
PTP4A1-203ENST00000473334 HSP90AA2PQ14568 343 aaPredicted RBP24.73■■□□□ 1.55
PTP4A1-203ENST00000473334 NAB2Q15742 525 aa24.73■■□□□ 1.55
PTP4A1-203ENST00000473334 FUT10Q6P4F1 479 aa24.73■■□□□ 1.55
PTP4A1-203ENST00000473334 MPZL3Q6UWV2 235 aa24.73■■□□□ 1.55
PTP4A1-203ENST00000473334 USP49Q70CQ1 688 aa24.73■■□□□ 1.55
PTP4A1-203ENST00000473334 CEP120Q8N960 986 aa24.73■■□□□ 1.55
PTP4A1-203ENST00000473334 CCDC94Q9BW85 323 aaPredicted RBP24.73■■□□□ 1.55
PTP4A1-203ENST00000473334 APOL5Q9BWW9 433 aa24.73■■□□□ 1.55
PTP4A1-203ENST00000473334 C1QTNF1Q9BXJ1 281 aa24.73■■□□□ 1.55
PTP4A1-203ENST00000473334 EPHX3Q9H6B9 360 aa24.73■■□□□ 1.55
PTP4A1-203ENST00000473334 CACNG4Q9UBN1 327 aa24.73■■□□□ 1.55
PTP4A1-203ENST00000473334 CASTOR2A6NHX0 329 aa24.72■■□□□ 1.55
PTP4A1-203ENST00000473334 PI4K2BG5E9Z4 385 aa24.72■■□□□ 1.55
PTP4A1-203ENST00000473334 C2CD2LO14523 706 aa24.72■■□□□ 1.55
PTP4A1-203ENST00000473334 FAM13AO94988 1023 aa24.72■■□□□ 1.55
PTP4A1-203ENST00000473334 HSP90AA1P07900 732 aaKnown RBP24.72■■□□□ 1.55
PTP4A1-203ENST00000473334 CNPP09543 421 aaKnown RBP24.72■■□□□ 1.55
PTP4A1-203ENST00000473334 MCF2P10911 925 aa24.72■■□□□ 1.55
PTP4A1-203ENST00000473334 EPCAMP16422 314 aa24.72■■□□□ 1.55
PTP4A1-203ENST00000473334 KLRC2P26717 231 aa24.72■■□□□ 1.55
PTP4A1-203ENST00000473334 TXLNAP40222 546 aa24.72■■□□□ 1.55
PTP4A1-203ENST00000473334 CBX2Q14781 532 aaPredicted RBP24.72■■□□□ 1.55
PTP4A1-203ENST00000473334 ZBTB33Q86T24 672 aa24.72■■□□□ 1.55
PTP4A1-203ENST00000473334 RABGGTAQ92696 567 aa24.72■■□□□ 1.55
PTP4A1-203ENST00000473334 CLIC6Q96NY7 704 aa24.72■■□□□ 1.55
PTP4A1-203ENST00000473334 PAAF1Q9BRP4 392 aa24.72■■□□□ 1.55
PTP4A1-203ENST00000473334 TCHPQ9BT92 498 aa24.72■■□□□ 1.55
PTP4A1-203ENST00000473334 PHF7Q9BWX1 381 aaPredicted RBP24.72■■□□□ 1.55
PTP4A1-203ENST00000473334 GPR62Q9BZJ7 368 aa24.72■■□□□ 1.55
PTP4A1-203ENST00000473334 TOPORSQ9NS56 1045 aaPredicted RBP24.72■■□□□ 1.55
PTP4A1-203ENST00000473334 CCDC39Q9UFE4 941 aa24.72■■□□□ 1.55
PTP4A1-203ENST00000473334 ABLIM1O14639 778 aa24.71■■□□□ 1.55
PTP4A1-203ENST00000473334 TADA2AO75478 443 aa24.71■■□□□ 1.55
PTP4A1-203ENST00000473334 BRD1O95696 1058 aa24.71■■□□□ 1.55
PTP4A1-203ENST00000473334 KRT18P05783 430 aaKnown RBP24.71■■□□□ 1.55
PTP4A1-203ENST00000473334 DDIT3P35638 169 aa24.71■■□□□ 1.55
PTP4A1-203ENST00000473334 ZNF131P52739 623 aa24.71■■□□□ 1.55
PTP4A1-203ENST00000473334 YARSP54577 528 aaKnown RBP24.71■■□□□ 1.55
PTP4A1-203ENST00000473334 DSG1Q02413 1049 aa24.71■■□□□ 1.55
PTP4A1-203ENST00000473334 ITIH3Q06033 890 aa24.71■■□□□ 1.55
PTP4A1-203ENST00000473334 SLC39A14Q15043 492 aa24.71■■□□□ 1.55
PTP4A1-203ENST00000473334 KIAA0319Q5VV43 1072 aa24.71■■□□□ 1.55
PTP4A1-203ENST00000473334 KIAA1841Q6NSI8 718 aa24.71■■□□□ 1.55
PTP4A1-203ENST00000473334 KCNN1Q92952 543 aa24.71■■□□□ 1.55
PTP4A1-203ENST00000473334 PARVGQ9HBI0 331 aa24.71■■□□□ 1.55
PTP4A1-203ENST00000473334 CHST7Q9NS84 486 aa24.71■■□□□ 1.55
PTP4A1-203ENST00000473334 STK17AQ9UEE5 414 aa24.71■■□□□ 1.55
PTP4A1-203ENST00000473334 CITO14578 2027 aa24.71■■□□□ 1.55
PTP4A1-203ENST00000473334 SF3B1O75533 1304 aaKnown RBP eCLIP24.7■■□□□ 1.54
PTP4A1-203ENST00000473334 TOM1L1O75674 476 aa24.7■■□□□ 1.54
PTP4A1-203ENST00000473334 NASPP49321 788 aaPredicted RBP24.7■■□□□ 1.54
PTP4A1-203ENST00000473334 CLCN4P51793 760 aa24.7■■□□□ 1.54
PTP4A1-203ENST00000473334 USP41Q3LFD5 358 aa24.7■■□□□ 1.54
PTP4A1-203ENST00000473334 GLRA4Q5JXX5 417 aa24.7■■□□□ 1.54
PTP4A1-203ENST00000473334 CES5AQ6NT32 575 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms