RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 LARP4BQ92615 738 aaKnown RBP17.12■□□□□ 0.33
MRPL55-226ENST00000473066 RAD54LQ92698 747 aa17.12■□□□□ 0.33
MRPL55-226ENST00000473066 CCSER1Q9C0I3 900 aa17.12■□□□□ 0.33
MRPL55-226ENST00000473066 ZHX3Q9H4I2 956 aa17.12■□□□□ 0.33
MRPL55-226ENST00000473066 TOPORSQ9NS56 1045 aaPredicted RBP17.12■□□□□ 0.33
MRPL55-226ENST00000473066 DZANK1Q9NVP4 752 aa17.12■□□□□ 0.33
MRPL55-226ENST00000473066 MARCH5Q9NX47 278 aa17.12■□□□□ 0.33
MRPL55-226ENST00000473066 USP15Q9Y4E8 981 aaPredicted RBP17.12■□□□□ 0.33
MRPL55-226ENST00000473066 HCFC2Q9Y5Z7 792 aa17.12■□□□□ 0.33
MRPL55-226ENST00000473066 PLXNA3P51805 1871 aa17.12■□□□□ 0.33
MRPL55-226ENST00000473066 CLASP2O75122 1294 aaKnown RBP17.11■□□□□ 0.33
MRPL55-226ENST00000473066 HARSP12081 509 aaKnown RBP17.11■□□□□ 0.33
MRPL55-226ENST00000473066 MATR3P43243 847 aaKnown RBP eCLIP17.11■□□□□ 0.33
MRPL55-226ENST00000473066 GLUD2P49448 558 aa17.11■□□□□ 0.33
MRPL55-226ENST00000473066 CACNB1Q02641 598 aaPredicted RBP17.11■□□□□ 0.33
MRPL55-226ENST00000473066 ZP2Q05996 745 aa17.11■□□□□ 0.33
MRPL55-226ENST00000473066 MCM6Q14566 821 aa17.11■□□□□ 0.33
MRPL55-226ENST00000473066 TMEM184AQ6ZMB5 413 aa17.11■□□□□ 0.33
MRPL55-226ENST00000473066 BICD1Q96G01 975 aa17.11■□□□□ 0.33
MRPL55-226ENST00000473066 ZNF396Q96N95 335 aaPredicted RBP17.11■□□□□ 0.33
MRPL55-226ENST00000473066 USP28Q96RU2 1077 aa17.11■□□□□ 0.33
MRPL55-226ENST00000473066 ACO2Q99798 780 aaKnown RBP17.11■□□□□ 0.33
MRPL55-226ENST00000473066 REEP2Q9BRK0 252 aa17.11■□□□□ 0.33
MRPL55-226ENST00000473066 TARS2Q9BW92 718 aaKnown RBP17.11■□□□□ 0.33
MRPL55-226ENST00000473066 CDT1Q9H211 546 aa17.11■□□□□ 0.33
MRPL55-226ENST00000473066 ANKFY1Q9P2R3 1169 aa17.11■□□□□ 0.33
MRPL55-226ENST00000473066 STK17AQ9UEE5 414 aa17.11■□□□□ 0.33
MRPL55-226ENST00000473066 FBXO2Q9UK22 296 aaPredicted RBP17.11■□□□□ 0.33
MRPL55-226ENST00000473066 SRPRBQ9Y5M8 271 aaKnown RBP17.11■□□□□ 0.33
MRPL55-226ENST00000473066 MTCL1Q9Y4B5 1905 aaKnown RBP17.11■□□□□ 0.33
MRPL55-226ENST00000473066 VCANP13611 3396 aa17.11■□□□□ 0.33
MRPL55-226ENST00000473066 NPHP3-ACAD11A0A0J9YXS1 232 aa17.1■□□□□ 0.33
MRPL55-226ENST00000473066 CASTOR2A6NHX0 329 aa17.1■□□□□ 0.33
MRPL55-226ENST00000473066 K7ENM7 598 aa17.1■□□□□ 0.33
MRPL55-226ENST00000473066 C2CD2LO14523 706 aa17.1■□□□□ 0.33
MRPL55-226ENST00000473066 TADA2AO75478 443 aa17.1■□□□□ 0.33
MRPL55-226ENST00000473066 MCF2P10911 925 aa17.1■□□□□ 0.33
MRPL55-226ENST00000473066 SCP2P22307 547 aa17.1■□□□□ 0.33
MRPL55-226ENST00000473066 KLRC2P26717 231 aa17.1■□□□□ 0.33
MRPL55-226ENST00000473066 GRM5P41594 1212 aa17.1■□□□□ 0.33
MRPL55-226ENST00000473066 HSP90AA2PQ14568 343 aaPredicted RBP17.1■□□□□ 0.33
MRPL55-226ENST00000473066 CES5AQ6NT32 575 aa17.1■□□□□ 0.33
MRPL55-226ENST00000473066 FUT10Q6P4F1 479 aa17.1■□□□□ 0.33
MRPL55-226ENST00000473066 ELMSAN1Q6PJG2 1045 aa17.1■□□□□ 0.33
MRPL55-226ENST00000473066 MPZL3Q6UWV2 235 aa17.1■□□□□ 0.33
MRPL55-226ENST00000473066 ZBTB33Q86T24 672 aa17.1■□□□□ 0.33
MRPL55-226ENST00000473066 MYCT1Q8N699 235 aa17.1■□□□□ 0.33
MRPL55-226ENST00000473066 KRI1Q8N9T8 703 aaKnown RBP17.1■□□□□ 0.33
MRPL55-226ENST00000473066 VN1R3Q9BXE9 311 aa17.1■□□□□ 0.33
MRPL55-226ENST00000473066 PARVGQ9HBI0 331 aa17.1■□□□□ 0.33
MRPL55-226ENST00000473066 BLOC1S4Q9NUP1 217 aa17.1■□□□□ 0.33
MRPL55-226ENST00000473066 ADAM28Q9UKQ2 775 aa17.1■□□□□ 0.33
MRPL55-226ENST00000473066 SF3B1O75533 1304 aaKnown RBP eCLIP17.1■□□□□ 0.332e-7■■■■■ 129.2
MRPL55-226ENST00000473066 ADH1AP07327 375 aa17.09■□□□□ 0.33
MRPL55-226ENST00000473066 ABCD1P33897 745 aa17.09■□□□□ 0.33
MRPL55-226ENST00000473066 KCNC3Q14003 757 aa17.09■□□□□ 0.33
MRPL55-226ENST00000473066 NOLC1Q14978 699 aaKnown RBP eCLIP17.09■□□□□ 0.33
MRPL55-226ENST00000473066 SPECC1Q5M775 1068 aa17.09■□□□□ 0.33
MRPL55-226ENST00000473066 RRAGBQ5VZM2 374 aa17.09■□□□□ 0.33
MRPL55-226ENST00000473066 TAS1R3Q7RTX0 852 aa17.09■□□□□ 0.33
MRPL55-226ENST00000473066 TMEM161BQ8NDZ6 487 aa17.09■□□□□ 0.33
MRPL55-226ENST00000473066 GSTCDQ8NEC7 633 aa17.09■□□□□ 0.33
MRPL55-226ENST00000473066 EPSTI1Q96J88 318 aa17.09■□□□□ 0.33
MRPL55-226ENST00000473066 NTPCRQ9BSD7 190 aaKnown RBP17.09■□□□□ 0.33
MRPL55-226ENST00000473066 APOL5Q9BWW9 433 aa17.09■□□□□ 0.33
MRPL55-226ENST00000473066 SPTBN5Q9NRC6 3674 aaKnown RBP17.09■□□□□ 0.33
MRPL55-226ENST00000473066 PTGESO14684 152 aa17.08■□□□□ 0.32
MRPL55-226ENST00000473066 TOM1L1O75674 476 aa17.08■□□□□ 0.32
MRPL55-226ENST00000473066 MAPTP10636 758 aaKnown RBP17.08■□□□□ 0.32
MRPL55-226ENST00000473066 NCKAP1LP55160 1127 aa17.08■□□□□ 0.32
MRPL55-226ENST00000473066 OSTNP61366 133 aa17.08■□□□□ 0.32
MRPL55-226ENST00000473066 CREMQ03060 361 aa17.08■□□□□ 0.32
MRPL55-226ENST00000473066 ELAVL2Q12926 359 aaKnown RBP17.08■□□□□ 0.32
MRPL55-226ENST00000473066 CBX2Q14781 532 aaPredicted RBP17.08■□□□□ 0.32
MRPL55-226ENST00000473066 SLC39A14Q15043 492 aa17.08■□□□□ 0.32
MRPL55-226ENST00000473066 USP41Q3LFD5 358 aa17.08■□□□□ 0.32
MRPL55-226ENST00000473066 ARSHQ5FYA8 562 aa17.08■□□□□ 0.32
MRPL55-226ENST00000473066 GLRA4Q5JXX5 417 aa17.08■□□□□ 0.32
MRPL55-226ENST00000473066 FOXD4L5Q5VV16 416 aaPredicted RBP17.08■□□□□ 0.32
MRPL55-226ENST00000473066 ZPBP2Q6X784 338 aa17.08■□□□□ 0.32
MRPL55-226ENST00000473066 CCDC73Q6ZRK6 1079 aa17.08■□□□□ 0.32
MRPL55-226ENST00000473066 HAUS6Q7Z4H7 955 aa17.08■□□□□ 0.32
MRPL55-226ENST00000473066 FOXD4L4Q8WXT5 416 aaPredicted RBP17.08■□□□□ 0.32
MRPL55-226ENST00000473066 CLIC6Q96NY7 704 aa17.08■□□□□ 0.32
MRPL55-226ENST00000473066 KLHL5Q96PQ7 755 aa17.08■□□□□ 0.32
MRPL55-226ENST00000473066 PHF7Q9BWX1 381 aaPredicted RBP17.08■□□□□ 0.32
MRPL55-226ENST00000473066 C1QTNF1Q9BXJ1 281 aa17.08■□□□□ 0.32
MRPL55-226ENST00000473066 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.08■□□□□ 0.32
MRPL55-226ENST00000473066 MORC2Q9Y6X9 1032 aaPredicted RBP17.08■□□□□ 0.32
MRPL55-226ENST00000473066 XIRP2A4UGR9 3374 aa17.08■□□□□ 0.32
MRPL55-226ENST00000473066 C2orf16Q68DN1 1984 aa17.08■□□□□ 0.32
MRPL55-226ENST00000473066 VWA8A3KMH1 1905 aa17.08■□□□□ 0.32
MRPL55-226ENST00000473066 HNRNPDLO14979 420 aaKnown RBP17.07■□□□□ 0.32
MRPL55-226ENST00000473066 CNPP09543 421 aaKnown RBP17.07■□□□□ 0.32
MRPL55-226ENST00000473066 EPCAMP16422 314 aa17.07■□□□□ 0.32
MRPL55-226ENST00000473066 STAT6P42226 847 aa17.07■□□□□ 0.32
MRPL55-226ENST00000473066 NASPP49321 788 aaPredicted RBP17.07■□□□□ 0.32
MRPL55-226ENST00000473066 LIG4P49917 911 aa17.07■□□□□ 0.32
MRPL55-226ENST00000473066 ITIH3Q06033 890 aa17.07■□□□□ 0.32
MRPL55-226ENST00000473066 SYCE2Q6PIF2 218 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms