RNA–Protein interactions for RNA: ENST00000472378.1

TSPO-205, Transcript of translocator protein, humanhuman

TSL 2

Gene TSPO, Length 495 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-205ENST00000472378 ZFP42Q96MM3 310 aa18.35■□□□□ 0.53
TSPO-205ENST00000472378 C7orf25Q9BPX7 421 aa18.35■□□□□ 0.53
TSPO-205ENST00000472378 COLEC11Q9BWP8 271 aa18.35■□□□□ 0.53
TSPO-205ENST00000472378 TRIM9Q9C026 710 aa18.35■□□□□ 0.53
TSPO-205ENST00000472378 CDT1Q9H211 546 aa18.35■□□□□ 0.53
TSPO-205ENST00000472378 SLC38A7Q9NVC3 462 aa18.35■□□□□ 0.53
TSPO-205ENST00000472378 SNTG2Q9NY99 539 aa18.35■□□□□ 0.53
TSPO-205ENST00000472378 GDAQ9Y2T3 454 aa18.35■□□□□ 0.53
TSPO-205ENST00000472378 FRMD3A2A2Y4 597 aa18.34■□□□□ 0.53
TSPO-205ENST00000472378 SYKP43405 635 aa18.34■□□□□ 0.53
TSPO-205ENST00000472378 MCL1Q07820 350 aa18.34■□□□□ 0.53
TSPO-205ENST00000472378 DSC1Q08554 894 aa18.34■□□□□ 0.53
TSPO-205ENST00000472378 TUSC3Q13454 348 aa18.34■□□□□ 0.53
TSPO-205ENST00000472378 ZBTB33Q86T24 672 aa18.34■□□□□ 0.53
TSPO-205ENST00000472378 DDX53Q86TM3 631 aaKnown RBP18.34■□□□□ 0.53
TSPO-205ENST00000472378 ZNF280BQ86YH2 543 aa18.34■□□□□ 0.53
TSPO-205ENST00000472378 MAP4K3Q8IVH8 894 aa18.34■□□□□ 0.53
TSPO-205ENST00000472378 TMEM87AQ8NBN3 555 aa18.34■□□□□ 0.53
TSPO-205ENST00000472378 HLA-CQ95604 372 aa18.34■□□□□ 0.53
TSPO-205ENST00000472378 ACCSQ96QU6 501 aa18.34■□□□□ 0.53
TSPO-205ENST00000472378 TSPAN18Q96SJ8 248 aa18.34■□□□□ 0.53
TSPO-205ENST00000472378 CDCA3Q99618 268 aaPredicted RBP18.34■□□□□ 0.53
TSPO-205ENST00000472378 THEGQ9P2T0 379 aa18.34■□□□□ 0.53
TSPO-205ENST00000472378 HCSTQ9UBK5 93 aa18.34■□□□□ 0.53
TSPO-205ENST00000472378 MYO7AQ13402 2215 aa18.34■□□□□ 0.53
TSPO-205ENST00000472378 PVALEFA0A1B0GWK0 134 aa18.33■□□□□ 0.52
TSPO-205ENST00000472378 GCNT3O95395 438 aa18.33■□□□□ 0.52
TSPO-205ENST00000472378 EDN1P05305 212 aa18.33■□□□□ 0.52
TSPO-205ENST00000472378 CLTAP09496 248 aa18.33■□□□□ 0.52
TSPO-205ENST00000472378 PFKFB1P16118 471 aa18.33■□□□□ 0.52
TSPO-205ENST00000472378 NMT1P30419 496 aaKnown RBP18.33■□□□□ 0.52
TSPO-205ENST00000472378 SLC11A1P49279 550 aa18.33■□□□□ 0.52
TSPO-205ENST00000472378 TMC7Q7Z402 723 aa18.33■□□□□ 0.52
TSPO-205ENST00000472378 COLGALT2Q8IYK4 626 aa18.33■□□□□ 0.52
TSPO-205ENST00000472378 ATXN2LQ8WWM7 1075 aaKnown RBP18.33■□□□□ 0.52
TSPO-205ENST00000472378 CCDC47Q96A33 483 aaKnown RBP18.33■□□□□ 0.52
TSPO-205ENST00000472378 TMEM206Q9H813 350 aa18.33■□□□□ 0.52
TSPO-205ENST00000472378 PLEKHA5Q9HAU0 1116 aa18.33■□□□□ 0.52
TSPO-205ENST00000472378 ENTPD7Q9NQZ7 604 aa18.33■□□□□ 0.52
TSPO-205ENST00000472378 KLK14Q9P0G3 267 aa18.33■□□□□ 0.52
TSPO-205ENST00000472378 SSX2IPQ9Y2D8 614 aa18.33■□□□□ 0.52
TSPO-205ENST00000472378 USP20Q9Y2K6 914 aa18.33■□□□□ 0.52
TSPO-205ENST00000472378 A0A1B0GVL5 298 aa18.32■□□□□ 0.52
TSPO-205ENST00000472378 DDHD2O94830 711 aa18.32■□□□□ 0.52
TSPO-205ENST00000472378 SRGAP2BP0DMP2 458 aa18.32■□□□□ 0.52
TSPO-205ENST00000472378 OR1G1P47890 313 aa18.32■□□□□ 0.52
TSPO-205ENST00000472378 HSP90AA2PQ14568 343 aaPredicted RBP18.32■□□□□ 0.52
TSPO-205ENST00000472378 SMC1AQ14683 1233 aaKnown RBP18.32■□□□□ 0.52
TSPO-205ENST00000472378 KANK3Q6NY19 840 aa18.32■□□□□ 0.52
TSPO-205ENST00000472378 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.32■□□□□ 0.52
TSPO-205ENST00000472378 SYCP3Q8IZU3 236 aa18.32■□□□□ 0.52
TSPO-205ENST00000472378 UROC1Q96N76 676 aa18.32■□□□□ 0.52
TSPO-205ENST00000472378 FIZ1Q96SL8 496 aa18.32■□□□□ 0.52
TSPO-205ENST00000472378 TCF25Q9BQ70 676 aa18.32■□□□□ 0.52
TSPO-205ENST00000472378 CHMP5Q9NZZ3 219 aa18.32■□□□□ 0.52
TSPO-205ENST00000472378 DNAJB4Q9UDY4 337 aa18.32■□□□□ 0.52
TSPO-205ENST00000472378 CITO14578 2027 aa18.32■□□□□ 0.52
TSPO-205ENST00000472378 PLXNA4Q9HCM2 1894 aa18.31■□□□□ 0.52
TSPO-205ENST00000472378 FAM237AA0A1B0GTK4 181 aa18.31■□□□□ 0.52
TSPO-205ENST00000472378 NRP1O14786 923 aa18.31■□□□□ 0.52
TSPO-205ENST00000472378 OGTO15294 1046 aa18.31■□□□□ 0.52
TSPO-205ENST00000472378 HARSP12081 509 aaKnown RBP18.31■□□□□ 0.52
TSPO-205ENST00000472378 PBX3P40426 434 aa18.31■□□□□ 0.52
TSPO-205ENST00000472378 AFF1P51825 1210 aaKnown RBP18.31■□□□□ 0.52
TSPO-205ENST00000472378 POU5F1Q01860 360 aaKnown RBP18.31■□□□□ 0.52
TSPO-205ENST00000472378 COASYQ13057 564 aa18.31■□□□□ 0.52
TSPO-205ENST00000472378 CAMK1Q14012 370 aa18.31■□□□□ 0.52
TSPO-205ENST00000472378 TCEAL5Q5H9L2 206 aa18.31■□□□□ 0.52
TSPO-205ENST00000472378 L1TD1Q5T7N2 865 aaKnown RBP18.31■□□□□ 0.52
TSPO-205ENST00000472378 UNC13DQ70J99 1090 aa18.31■□□□□ 0.52
TSPO-205ENST00000472378 CD302Q8IX05 232 aa18.31■□□□□ 0.52
TSPO-205ENST00000472378 VPS52Q8N1B4 723 aa18.31■□□□□ 0.52
TSPO-205ENST00000472378 FSIP1Q8NA03 581 aa18.31■□□□□ 0.52
TSPO-205ENST00000472378 GSTCDQ8NEC7 633 aa18.31■□□□□ 0.52
TSPO-205ENST00000472378 STAMQ92783 540 aa18.31■□□□□ 0.52
TSPO-205ENST00000472378 DDX27Q96GQ7 796 aaKnown RBP18.31■□□□□ 0.52
TSPO-205ENST00000472378 MSTO1Q9BUK6 570 aa18.31■□□□□ 0.52
TSPO-205ENST00000472378 TLE6Q9H808 572 aa18.31■□□□□ 0.52
TSPO-205ENST00000472378 HPSEQ9Y251 543 aa18.31■□□□□ 0.52
TSPO-205ENST00000472378 A0A0B4J269 797 aa18.3■□□□□ 0.52
TSPO-205ENST00000472378 NT5C1B-RDH14C9J2C7 533 aa18.3■□□□□ 0.52
TSPO-205ENST00000472378 ABLIM1O14639 778 aa18.3■□□□□ 0.52
TSPO-205ENST00000472378 FSCN2O14926 492 aa18.3■□□□□ 0.52
TSPO-205ENST00000472378 EIF3DO15371 548 aaKnown RBP eCLIP18.3■□□□□ 0.52
TSPO-205ENST00000472378 XPOTO43592 962 aaKnown RBP18.3■□□□□ 0.52
TSPO-205ENST00000472378 PPP1R37O75864 691 aa18.3■□□□□ 0.52
TSPO-205ENST00000472378 DNAJB1P25685 340 aa18.3■□□□□ 0.52
TSPO-205ENST00000472378 AFMP43652 599 aa18.3■□□□□ 0.52
TSPO-205ENST00000472378 OSTNP61366 133 aa18.3■□□□□ 0.52
TSPO-205ENST00000472378 MRPS5P82675 430 aaKnown RBP18.3■□□□□ 0.52
TSPO-205ENST00000472378 ELAVL2Q12926 359 aaKnown RBP18.3■□□□□ 0.52
TSPO-205ENST00000472378 ZC2HC1CQ53FD0 456 aaPredicted RBP18.3■□□□□ 0.52
TSPO-205ENST00000472378 PABPC5Q96DU9 382 aaKnown RBP18.3■□□□□ 0.52
TSPO-205ENST00000472378 STRA6Q9BX79 667 aa18.3■□□□□ 0.52
TSPO-205ENST00000472378 MIOSQ9NXC5 875 aa18.3■□□□□ 0.52
TSPO-205ENST00000472378 TBC1D7Q9P0N9 293 aa18.3■□□□□ 0.52
TSPO-205ENST00000472378 SERTAD1Q9UHV2 236 aa18.3■□□□□ 0.52
TSPO-205ENST00000472378 PRG3Q9Y2Y8 225 aaPredicted RBP18.3■□□□□ 0.52
TSPO-205ENST00000472378 KIAA0391O15091 583 aaKnown RBP18.29■□□□□ 0.52
TSPO-205ENST00000472378 KCNE1P15382 129 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms