RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 RABGGTAQ92696 567 aa21.19■□□□□ 0.98
SORT1-203ENST00000471996 CPB2Q96IY4 423 aa21.19■□□□□ 0.98
SORT1-203ENST00000471996 VPS54Q9P1Q0 977 aa21.19■□□□□ 0.98
SORT1-203ENST00000471996 CACNA1GO43497 2377 aa21.19■□□□□ 0.98
SORT1-203ENST00000471996 SF3B1O75533 1304 aaKnown RBP eCLIP21.19■□□□□ 0.983e-7■■■■■ 46.8
SORT1-203ENST00000471996 EML1O00423 815 aa21.18■□□□□ 0.98
SORT1-203ENST00000471996 DKC1O60832 514 aaKnown RBP eCLIP21.18■□□□□ 0.98
SORT1-203ENST00000471996 POU2F2P09086 479 aa21.18■□□□□ 0.98
SORT1-203ENST00000471996 TDGF1P13385 188 aa21.18■□□□□ 0.98
SORT1-203ENST00000471996 NRLP54845 237 aa21.18■□□□□ 0.98
SORT1-203ENST00000471996 NCBP1Q09161 790 aaKnown RBP21.18■□□□□ 0.98
SORT1-203ENST00000471996 GRIK3Q13003 919 aa21.18■□□□□ 0.98
SORT1-203ENST00000471996 LAIR1Q6GTX8 287 aa21.18■□□□□ 0.98
SORT1-203ENST00000471996 MAMSTRQ6ZN01 415 aa21.18■□□□□ 0.98
SORT1-203ENST00000471996 HACE1Q8IYU2 909 aa21.18■□□□□ 0.98
SORT1-203ENST00000471996 CELF5Q8N6W0 485 aaKnown RBP21.18■□□□□ 0.98
SORT1-203ENST00000471996 TCP11Q8WWU5 503 aa21.18■□□□□ 0.98
SORT1-203ENST00000471996 PIK3R5Q8WYR1 880 aa21.18■□□□□ 0.98
SORT1-203ENST00000471996 C22orf23Q9BZE7 217 aa21.18■□□□□ 0.98
SORT1-203ENST00000471996 NXF3Q9H4D5 531 aaKnown RBP21.18■□□□□ 0.98
SORT1-203ENST00000471996 KCNH3Q9ULD8 1083 aa21.18■□□□□ 0.98
SORT1-203ENST00000471996 CHD8Q9HCK8 2581 aa21.18■□□□□ 0.98
SORT1-203ENST00000471996 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.17■□□□□ 0.98
SORT1-203ENST00000471996 SHISA7A6NL88 538 aa21.17■□□□□ 0.98
SORT1-203ENST00000471996 LRP3O75074 770 aa21.17■□□□□ 0.98
SORT1-203ENST00000471996 ECI2O75521 394 aa21.17■□□□□ 0.98
SORT1-203ENST00000471996 PTENP60484 403 aa21.17■□□□□ 0.98
SORT1-203ENST00000471996 HSP90AA2PQ14568 343 aaPredicted RBP21.17■□□□□ 0.98
SORT1-203ENST00000471996 LPAL2Q16609 132 aa21.17■□□□□ 0.98
SORT1-203ENST00000471996 RASEFQ8IZ41 740 aa21.17■□□□□ 0.98
SORT1-203ENST00000471996 LNX1Q8TBB1 728 aaPredicted RBP21.17■□□□□ 0.98
SORT1-203ENST00000471996 TTPALQ9BTX7 342 aa21.17■□□□□ 0.98
SORT1-203ENST00000471996 TRIM6Q9C030 488 aaPredicted RBP21.17■□□□□ 0.98
SORT1-203ENST00000471996 HEBP1Q9NRV9 189 aa21.17■□□□□ 0.98
SORT1-203ENST00000471996 BMP2KQ9NSY1 1161 aaPredicted RBP21.17■□□□□ 0.98
SORT1-203ENST00000471996 WRAP73Q9P2S5 460 aaPredicted RBP21.17■□□□□ 0.98
SORT1-203ENST00000471996 USP24Q9UPU5 2620 aa21.16■□□□□ 0.98
SORT1-203ENST00000471996 NID2Q14112 1375 aa21.16■□□□□ 0.98
SORT1-203ENST00000471996 RETP07949 1114 aa21.16■□□□□ 0.98
SORT1-203ENST00000471996 AKAP5P24588 427 aa21.16■□□□□ 0.98
SORT1-203ENST00000471996 FGD1P98174 961 aa21.16■□□□□ 0.98
SORT1-203ENST00000471996 EMC2Q15006 297 aa21.16■□□□□ 0.98
SORT1-203ENST00000471996 PSMD5Q16401 504 aa21.16■□□□□ 0.98
SORT1-203ENST00000471996 UVSSAQ2YD98 709 aa21.16■□□□□ 0.98
SORT1-203ENST00000471996 RNF26Q9BY78 433 aaPredicted RBP21.16■□□□□ 0.98
SORT1-203ENST00000471996 PLA2G2FQ9BZM2 168 aa21.16■□□□□ 0.98
SORT1-203ENST00000471996 HCFC1R1Q9NWW0 138 aa21.16■□□□□ 0.98
SORT1-203ENST00000471996 DNMT3BQ9UBC3 853 aaKnown RBP21.16■□□□□ 0.98
SORT1-203ENST00000471996 CHD6Q8TD26 2715 aa21.16■□□□□ 0.98
SORT1-203ENST00000471996 INO80B-WBP1J3KQ70 363 aa21.15■□□□□ 0.98
SORT1-203ENST00000471996 P4HBP07237 508 aaKnown RBP21.15■□□□□ 0.98
SORT1-203ENST00000471996 HMGB1P09429 215 aaKnown RBP21.15■□□□□ 0.98
SORT1-203ENST00000471996 NLRP5P59047 1200 aa21.15■□□□□ 0.98
SORT1-203ENST00000471996 PPP2R5CQ13362 524 aa21.15■□□□□ 0.98
SORT1-203ENST00000471996 NTRK3Q16288 839 aa21.15■□□□□ 0.98
SORT1-203ENST00000471996 AMHR2Q16671 573 aa21.15■□□□□ 0.98
SORT1-203ENST00000471996 PABPC1LQ4VXU2 614 aaKnown RBP21.15■□□□□ 0.98
SORT1-203ENST00000471996 FAM171A1Q5VUB5 890 aa21.15■□□□□ 0.98
SORT1-203ENST00000471996 MOXD1Q6UVY6 613 aa21.15■□□□□ 0.98
SORT1-203ENST00000471996 CEP57Q86XR8 500 aa21.15■□□□□ 0.98
SORT1-203ENST00000471996 IFNLR1Q8IU57 520 aaPredicted RBP21.15■□□□□ 0.98
SORT1-203ENST00000471996 ZNF687Q8N1G0 1237 aa21.15■□□□□ 0.98
SORT1-203ENST00000471996 SLC7A14Q8TBB6 771 aa21.15■□□□□ 0.98
SORT1-203ENST00000471996 PAAF1Q9BRP4 392 aa21.15■□□□□ 0.98
SORT1-203ENST00000471996 CHRDQ9H2X0 955 aa21.15■□□□□ 0.98
SORT1-203ENST00000471996 SH3GLB2Q9NR46 395 aa21.15■□□□□ 0.98
SORT1-203ENST00000471996 CACNG4Q9UBN1 327 aa21.15■□□□□ 0.98
SORT1-203ENST00000471996 DOCK6Q96HP0 2047 aa21.14■□□□□ 0.98
SORT1-203ENST00000471996 ZMYM2Q9UBW7 1377 aa21.14■□□□□ 0.98
SORT1-203ENST00000471996 ADAM12O43184 909 aa21.14■□□□□ 0.97
SORT1-203ENST00000471996 ARF4P18085 180 aaPredicted RBP21.14■□□□□ 0.97
SORT1-203ENST00000471996 KRT32Q14532 448 aa21.14■□□□□ 0.97
SORT1-203ENST00000471996 MXD4Q14582 209 aaPredicted RBP21.14■□□□□ 0.97
SORT1-203ENST00000471996 PPP2R5DQ14738 602 aa21.14■□□□□ 0.97
SORT1-203ENST00000471996 AXDND1Q5T1B0 1012 aaPredicted RBP21.14■□□□□ 0.97
SORT1-203ENST00000471996 HASPINQ8TF76 798 aa21.14■□□□□ 0.97
SORT1-203ENST00000471996 ING5Q8WYH8 240 aa21.14■□□□□ 0.97
SORT1-203ENST00000471996 DNASE1L2Q92874 299 aa21.14■□□□□ 0.97
SORT1-203ENST00000471996 IER2Q9BTL4 223 aa21.14■□□□□ 0.97
SORT1-203ENST00000471996 SLC26A6Q9BXS9 759 aa21.14■□□□□ 0.97
SORT1-203ENST00000471996 SEMA4GQ9NTN9 838 aa21.14■□□□□ 0.97
SORT1-203ENST00000471996 GDE1Q9NZC3 331 aa21.14■□□□□ 0.97
SORT1-203ENST00000471996 KLK14Q9P0G3 267 aa21.14■□□□□ 0.97
SORT1-203ENST00000471996 DDX25Q9UHL0 483 aaKnown RBP21.14■□□□□ 0.97
SORT1-203ENST00000471996 VAV3Q9UKW4 847 aa21.14■□□□□ 0.97
SORT1-203ENST00000471996 MRPS23Q9Y3D9 190 aaKnown RBP21.14■□□□□ 0.97
SORT1-203ENST00000471996 YWHABP31946 246 aaKnown RBP21.13■□□□□ 0.97
SORT1-203ENST00000471996 MBTD1Q05BQ5 628 aa21.13■□□□□ 0.97
SORT1-203ENST00000471996 POU5F1BQ06416 359 aa21.13■□□□□ 0.97
SORT1-203ENST00000471996 RAB33AQ14088 237 aa21.13■□□□□ 0.97
SORT1-203ENST00000471996 OTUD6AQ7L8S5 288 aa21.13■□□□□ 0.97
SORT1-203ENST00000471996 C4orf19Q8IY42 314 aa21.13■□□□□ 0.97
SORT1-203ENST00000471996 MCRS1Q96EZ8 462 aa21.13■□□□□ 0.97
SORT1-203ENST00000471996 PARP2Q9UGN5 583 aa21.13■□□□□ 0.97
SORT1-203ENST00000471996 NDRG2Q9UN36 371 aaKnown RBP21.13■□□□□ 0.97
SORT1-203ENST00000471996 PCDHA4Q9UN74 947 aa21.13■□□□□ 0.97
SORT1-203ENST00000471996 MAN2B1O00754 1011 aa21.12■□□□□ 0.97
SORT1-203ENST00000471996 IFNAR1P17181 557 aa21.12■□□□□ 0.97
SORT1-203ENST00000471996 TUSC3Q13454 348 aa21.12■□□□□ 0.97
SORT1-203ENST00000471996 TFDP1Q14186 410 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms