RNA–Protein interactions for RNA: ENST00000471862.1

COL4A3-205, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 5

Gene COL4A3, Length 755 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-205ENST00000471862 ADPGKQ9BRR6 497 aa12.69□□□□□ -0.38
COL4A3-205ENST00000471862 TIPINQ9BVW5 301 aa12.69□□□□□ -0.38
COL4A3-205ENST00000471862 BACH2Q9BYV9 841 aa12.69□□□□□ -0.38
COL4A3-205ENST00000471862 GPR62Q9BZJ7 368 aa12.69□□□□□ -0.38
COL4A3-205ENST00000471862 C17orf75Q9HAS0 396 aa12.69□□□□□ -0.38
COL4A3-205ENST00000471862 PTPRHQ9HD43 1115 aa12.69□□□□□ -0.38
COL4A3-205ENST00000471862 CACNG4Q9UBN1 327 aa12.69□□□□□ -0.38
COL4A3-205ENST00000471862 ADAM28Q9UKQ2 775 aa12.69□□□□□ -0.38
COL4A3-205ENST00000471862 TNFSF13BQ9Y275 285 aa12.69□□□□□ -0.38
COL4A3-205ENST00000471862 SSX2IPQ9Y2D8 614 aa12.69□□□□□ -0.38
COL4A3-205ENST00000471862 ARIH1Q9Y4X5 557 aaPredicted RBP12.69□□□□□ -0.38
COL4A3-205ENST00000471862 CITO14578 2027 aa12.69□□□□□ -0.38
COL4A3-205ENST00000471862 K7ERI5 159 aa12.68□□□□□ -0.38
COL4A3-205ENST00000471862 C2CD2LO14523 706 aa12.68□□□□□ -0.38
COL4A3-205ENST00000471862 ABLIM1O14639 778 aa12.68□□□□□ -0.38
COL4A3-205ENST00000471862 TEX28O15482 410 aa12.68□□□□□ -0.38
COL4A3-205ENST00000471862 SLC26A4O43511 780 aa12.68□□□□□ -0.38
COL4A3-205ENST00000471862 NR1I2O75469 434 aa12.68□□□□□ -0.38
COL4A3-205ENST00000471862 PAPLNO95428 1278 aa12.68□□□□□ -0.38
COL4A3-205ENST00000471862 KLRC2P26717 231 aa12.68□□□□□ -0.38
COL4A3-205ENST00000471862 MTHFRP42898 656 aa12.68□□□□□ -0.38
COL4A3-205ENST00000471862 SLC12A3P55017 1021 aa12.68□□□□□ -0.38
COL4A3-205ENST00000471862 ATF7IP2Q5U623 682 aa12.68□□□□□ -0.38
COL4A3-205ENST00000471862 BRAPQ7Z569 592 aa12.68□□□□□ -0.38
COL4A3-205ENST00000471862 TMEM87AQ8NBN3 555 aa12.68□□□□□ -0.38
COL4A3-205ENST00000471862 LRRC15Q8TF66 581 aa12.68□□□□□ -0.38
COL4A3-205ENST00000471862 AK8Q96MA6 479 aa12.68□□□□□ -0.38
COL4A3-205ENST00000471862 DRC1Q96MC2 740 aa12.68□□□□□ -0.38
COL4A3-205ENST00000471862 ACO2Q99798 780 aaKnown RBP12.68□□□□□ -0.38
COL4A3-205ENST00000471862 NTPCRQ9BSD7 190 aaKnown RBP12.68□□□□□ -0.38
COL4A3-205ENST00000471862 NT5C3AQ9H0P0 336 aa12.68□□□□□ -0.38
COL4A3-205ENST00000471862 CDT1Q9H211 546 aa12.68□□□□□ -0.38
COL4A3-205ENST00000471862 SFXN1Q9H9B4 322 aa12.68□□□□□ -0.38
COL4A3-205ENST00000471862 PDCD11Q14690 1871 aaKnown RBP12.68□□□□□ -0.38
COL4A3-205ENST00000471862 CCDC169A6NNP5 214 aa12.67□□□□□ -0.38
COL4A3-205ENST00000471862 C1RP00736 705 aa12.67□□□□□ -0.38
COL4A3-205ENST00000471862 THP07101 528 aa12.67□□□□□ -0.38
COL4A3-205ENST00000471862 WEE2P0C1S8 567 aa12.67□□□□□ -0.38
COL4A3-205ENST00000471862 PROZP22891 400 aa12.67□□□□□ -0.38
COL4A3-205ENST00000471862 ZXDAP98168 799 aa12.67□□□□□ -0.38
COL4A3-205ENST00000471862 GRIN1Q05586 938 aa12.67□□□□□ -0.38
COL4A3-205ENST00000471862 DMP1Q13316 513 aaPredicted RBP12.67□□□□□ -0.38
COL4A3-205ENST00000471862 HSP90AA2PQ14568 343 aaPredicted RBP12.67□□□□□ -0.38
COL4A3-205ENST00000471862 TMEM132AQ24JP5 1023 aa12.67□□□□□ -0.38
COL4A3-205ENST00000471862 USP41Q3LFD5 358 aa12.67□□□□□ -0.38
COL4A3-205ENST00000471862 XKR4Q5GH76 650 aa12.67□□□□□ -0.38
COL4A3-205ENST00000471862 GPR149Q86SP6 731 aa12.67□□□□□ -0.38
COL4A3-205ENST00000471862 CABP7Q86V35 215 aa12.67□□□□□ -0.38
COL4A3-205ENST00000471862 CEP120Q8N960 986 aa12.67□□□□□ -0.38
COL4A3-205ENST00000471862 CMASQ8NFW8 434 aaPredicted RBP12.67□□□□□ -0.38
COL4A3-205ENST00000471862 SPIRE2Q8WWL2 714 aa12.67□□□□□ -0.38
COL4A3-205ENST00000471862 RABGGTAQ92696 567 aa12.67□□□□□ -0.38
COL4A3-205ENST00000471862 KCNN1Q92952 543 aa12.67□□□□□ -0.38
COL4A3-205ENST00000471862 RIPOR3Q96MK2 946 aa12.67□□□□□ -0.38
COL4A3-205ENST00000471862 PPP1R10Q96QC0 940 aaKnown RBP12.67□□□□□ -0.38
COL4A3-205ENST00000471862 KMT5AQ9NQR1 393 aa12.67□□□□□ -0.38
COL4A3-205ENST00000471862 FNIP2Q9P278 1114 aa12.67□□□□□ -0.38
COL4A3-205ENST00000471862 RBM19Q9Y4C8 960 aaKnown RBP12.67□□□□□ -0.38
COL4A3-205ENST00000471862 CASTOR2A6NHX0 329 aa12.66□□□□□ -0.38
COL4A3-205ENST00000471862 SFI1A8K8P3 1242 aa12.66□□□□□ -0.38
COL4A3-205ENST00000471862 C2CD4DB7Z1M9 353 aa12.66□□□□□ -0.38
COL4A3-205ENST00000471862 TMEM189-UBE2V1I3L0A0 370 aa12.66□□□□□ -0.38
COL4A3-205ENST00000471862 KIF4AO95239 1232 aa12.66□□□□□ -0.38
COL4A3-205ENST00000471862 BRD1O95696 1058 aa12.66□□□□□ -0.38
COL4A3-205ENST00000471862 BMP15O95972 392 aa12.66□□□□□ -0.38
COL4A3-205ENST00000471862 ADH1AP07327 375 aa12.66□□□□□ -0.38
COL4A3-205ENST00000471862 PLA2G4BP0C869 781 aa12.66□□□□□ -0.38
COL4A3-205ENST00000471862 PLS3P13797 630 aa12.66□□□□□ -0.38
COL4A3-205ENST00000471862 GRM5P41594 1212 aa12.66□□□□□ -0.38
COL4A3-205ENST00000471862 ZRSR1Q15695 479 aaKnown RBP12.66□□□□□ -0.38
COL4A3-205ENST00000471862 PTPN21Q16825 1174 aa12.66□□□□□ -0.38
COL4A3-205ENST00000471862 ARSHQ5FYA8 562 aa12.66□□□□□ -0.38
COL4A3-205ENST00000471862 ATAT1Q5SQI0 421 aa12.66□□□□□ -0.38
COL4A3-205ENST00000471862 TMC5Q6UXY8 1006 aa12.66□□□□□ -0.38
COL4A3-205ENST00000471862 C15orf39Q6ZRI6 1047 aa12.66□□□□□ -0.38
COL4A3-205ENST00000471862 HFE2Q6ZVN8 426 aa12.66□□□□□ -0.38
COL4A3-205ENST00000471862 BMP8AQ7Z5Y6 402 aa12.66□□□□□ -0.38
COL4A3-205ENST00000471862 TMEM161BQ8NDZ6 487 aa12.66□□□□□ -0.38
COL4A3-205ENST00000471862 B3GALT6Q96L58 329 aa12.66□□□□□ -0.38
COL4A3-205ENST00000471862 PLIN2Q99541 437 aa12.66□□□□□ -0.38
COL4A3-205ENST00000471862 TARS2Q9BW92 718 aaKnown RBP12.66□□□□□ -0.38
COL4A3-205ENST00000471862 MRPL4Q9BYD3 311 aaKnown RBP12.66□□□□□ -0.38
COL4A3-205ENST00000471862 RHOBTB2Q9BYZ6 727 aa12.66□□□□□ -0.38
COL4A3-205ENST00000471862 MAN1C1Q9NR34 630 aa12.66□□□□□ -0.38
COL4A3-205ENST00000471862 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.66□□□□□ -0.38
COL4A3-205ENST00000471862 BLOC1S4Q9NUP1 217 aa12.66□□□□□ -0.38
COL4A3-205ENST00000471862 KCND2Q9NZV8 630 aa12.66□□□□□ -0.38
COL4A3-205ENST00000471862 GDAQ9Y2T3 454 aa12.66□□□□□ -0.38
COL4A3-205ENST00000471862 HCN4Q9Y3Q4 1203 aa12.66□□□□□ -0.38
COL4A3-205ENST00000471862 NR2E1Q9Y466 385 aa12.66□□□□□ -0.38
COL4A3-205ENST00000471862 SF3B1O75533 1304 aaKnown RBP eCLIP12.65□□□□□ -0.38
COL4A3-205ENST00000471862 DOCK8Q8NF50 2099 aa12.65□□□□□ -0.38
COL4A3-205ENST00000471862 SLC16A4O15374 487 aa12.65□□□□□ -0.38
COL4A3-205ENST00000471862 TADA2AO75478 443 aa12.65□□□□□ -0.38
COL4A3-205ENST00000471862 GLUD1P00367 558 aa12.65□□□□□ -0.38
COL4A3-205ENST00000471862 SP100P23497 879 aaPredicted RBP12.65□□□□□ -0.38
COL4A3-205ENST00000471862 LONP1P36776 959 aaKnown RBP12.65□□□□□ -0.38
COL4A3-205ENST00000471862 RESTQ13127 1097 aa12.65□□□□□ -0.38
COL4A3-205ENST00000471862 PTPAQ15257 358 aa12.65□□□□□ -0.38
COL4A3-205ENST00000471862 SF3A1Q15459 793 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms