RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 MTUS1Q9ULD2 1270 aa11.43□□□□□ -0.58
APLF-204ENST00000471727 COG5Q9UP83 839 aa11.43□□□□□ -0.58
APLF-204ENST00000471727 SCAF8Q9UPN6 1271 aaKnown RBP11.43□□□□□ -0.58
APLF-204ENST00000471727 ESYT3A0FGR9 886 aa11.42□□□□□ -0.58
APLF-204ENST00000471727 ZSCAN5CA6NGD5 496 aaPredicted RBP11.42□□□□□ -0.58
APLF-204ENST00000471727 SPDYE16A6NNV3 312 aaPredicted RBP11.42□□□□□ -0.58
APLF-204ENST00000471727 FAM153BP0C7A2 387 aa11.42□□□□□ -0.58
APLF-204ENST00000471727 TGFB3P10600 412 aa11.42□□□□□ -0.58
APLF-204ENST00000471727 GUCY2FP51841 1108 aa11.42□□□□□ -0.58
APLF-204ENST00000471727 AP3M2P53677 418 aa11.42□□□□□ -0.58
APLF-204ENST00000471727 POLGP54098 1239 aaPredicted RBP11.42□□□□□ -0.58
APLF-204ENST00000471727 EIF3BP55884 814 aaKnown RBP11.42□□□□□ -0.58
APLF-204ENST00000471727 BIRC3Q13489 604 aa11.42□□□□□ -0.58
APLF-204ENST00000471727 FAM153CQ494X1 144 aa11.42□□□□□ -0.58
APLF-204ENST00000471727 SLC39A4Q6P5W5 647 aa11.42□□□□□ -0.58
APLF-204ENST00000471727 LRRC31Q6UY01 552 aa11.42□□□□□ -0.58
APLF-204ENST00000471727 KDM7AQ6ZMT4 941 aa11.42□□□□□ -0.58
APLF-204ENST00000471727 TRIM72Q6ZMU5 477 aa11.42□□□□□ -0.58
APLF-204ENST00000471727 C15orf39Q6ZRI6 1047 aa11.42□□□□□ -0.58
APLF-204ENST00000471727 CROCCP2Q86T23 111 aa11.42□□□□□ -0.58
APLF-204ENST00000471727 CCDC60Q8IWA6 550 aaPredicted RBP11.42□□□□□ -0.58
APLF-204ENST00000471727 SEMA4DQ92854 862 aa11.42□□□□□ -0.58
APLF-204ENST00000471727 SAAL1Q96ER3 474 aa11.42□□□□□ -0.58
APLF-204ENST00000471727 PCDHB18PQ96TA0 734 aa11.42□□□□□ -0.58
APLF-204ENST00000471727 SH2D3AQ9BRG2 576 aa11.42□□□□□ -0.58
APLF-204ENST00000471727 ERP44Q9BS26 406 aa11.42□□□□□ -0.58
APLF-204ENST00000471727 FAM107BQ9H098 131 aa11.42□□□□□ -0.58
APLF-204ENST00000471727 PORCNQ9H237 461 aa11.42□□□□□ -0.58
APLF-204ENST00000471727 DHX33Q9H6R0 707 aaKnown RBP11.42□□□□□ -0.58
APLF-204ENST00000471727 AVENQ9NQS1 362 aaPredicted RBP11.42□□□□□ -0.58
APLF-204ENST00000471727 C1orf112Q9NSG2 853 aa11.42□□□□□ -0.58
APLF-204ENST00000471727 GPRC5DQ9NZD1 345 aa11.42□□□□□ -0.58
APLF-204ENST00000471727 AMACRQ9UHK6 382 aa11.42□□□□□ -0.58
APLF-204ENST00000471727 FAM153AQ9UHL3 310 aa11.42□□□□□ -0.58
APLF-204ENST00000471727 PCDHA3Q9Y5H8 950 aa11.42□□□□□ -0.58
APLF-204ENST00000471727 IGKV6D-21A0A0A0MT36 114 aa11.42□□□□□ -0.58
APLF-204ENST00000471727 PHF2O75151 1096 aa11.42□□□□□ -0.58
APLF-204ENST00000471727 OATP04181 439 aa11.42□□□□□ -0.58
APLF-204ENST00000471727 POTEJP0CG39 1038 aa11.42□□□□□ -0.58
APLF-204ENST00000471727 ITGA4P13612 1032 aa11.42□□□□□ -0.58
APLF-204ENST00000471727 ECHS1P30084 290 aa11.42□□□□□ -0.58
APLF-204ENST00000471727 COPB2P35606 906 aa11.42□□□□□ -0.58
APLF-204ENST00000471727 SLC1A1P43005 524 aa11.42□□□□□ -0.58
APLF-204ENST00000471727 PEX5P50542 639 aa11.42□□□□□ -0.58
APLF-204ENST00000471727 DR1Q01658 176 aa11.42□□□□□ -0.58
APLF-204ENST00000471727 NEDD9Q14511 834 aa11.42□□□□□ -0.58
APLF-204ENST00000471727 EMC2Q15006 297 aa11.42□□□□□ -0.58
APLF-204ENST00000471727 FAM160B1Q5W0V3 765 aa11.42□□□□□ -0.58
APLF-204ENST00000471727 PALB2Q86YC2 1186 aa11.42□□□□□ -0.58
APLF-204ENST00000471727 RIOX2Q8IUF8 465 aa11.42□□□□□ -0.58
APLF-204ENST00000471727 GPC2Q8N158 579 aa11.42□□□□□ -0.58
APLF-204ENST00000471727 ZSWIM2Q8NEG5 633 aa11.42□□□□□ -0.58
APLF-204ENST00000471727 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.42□□□□□ -0.58
APLF-204ENST00000471727 DEPTORQ8TB45 409 aa11.42□□□□□ -0.58
APLF-204ENST00000471727 ZNF564Q8TBZ8 553 aaPredicted RBP11.42□□□□□ -0.58
APLF-204ENST00000471727 TAS1R2Q8TE23 839 aa11.42□□□□□ -0.58
APLF-204ENST00000471727 PSPC1Q8WXF1 523 aaKnown RBP11.42□□□□□ -0.58
APLF-204ENST00000471727 SLC7A3Q8WY07 619 aa11.42□□□□□ -0.58
APLF-204ENST00000471727 PIK3R5Q8WYR1 880 aa11.42□□□□□ -0.58
APLF-204ENST00000471727 ATP6V1G3Q96LB4 118 aa11.42□□□□□ -0.58
APLF-204ENST00000471727 TSPYL1Q9H0U9 437 aa11.42□□□□□ -0.58
APLF-204ENST00000471727 PCYOX1Q9UHG3 505 aa11.42□□□□□ -0.58
APLF-204ENST00000471727 AGO2Q9UKV8 859 aaKnown RBP11.42□□□□□ -0.58
APLF-204ENST00000471727 PCDHB2Q9Y5E7 798 aa11.42□□□□□ -0.58
APLF-204ENST00000471727 PHIPQ8WWQ0 1821 aa11.41□□□□□ -0.58
APLF-204ENST00000471727 K7ERI5 159 aa11.41□□□□□ -0.58
APLF-204ENST00000471727 TTI1O43156 1089 aa11.41□□□□□ -0.58
APLF-204ENST00000471727 GAS2O43903 313 aaKnown RBP11.41□□□□□ -0.58
APLF-204ENST00000471727 MYZAPP0CAP1 466 aa11.41□□□□□ -0.58
APLF-204ENST00000471727 CTNNA1P35221 906 aaKnown RBP11.41□□□□□ -0.58
APLF-204ENST00000471727 ARL2P36404 184 aa11.41□□□□□ -0.58
APLF-204ENST00000471727 HSD17B3P37058 310 aa11.41□□□□□ -0.58
APLF-204ENST00000471727 IRAK1P51617 712 aa11.41□□□□□ -0.58
APLF-204ENST00000471727 RWDD2BP57060 319 aa11.41□□□□□ -0.58
APLF-204ENST00000471727 CLEC16AQ2KHT3 1053 aa11.41□□□□□ -0.58
APLF-204ENST00000471727 ZACNQ401N2 412 aa11.41□□□□□ -0.58
APLF-204ENST00000471727 MTERF2Q49AM1 385 aa11.41□□□□□ -0.58
APLF-204ENST00000471727 TTMPQ5BVD1 217 aa11.41□□□□□ -0.58
APLF-204ENST00000471727 AGBL2Q5U5Z8 902 aa11.41□□□□□ -0.58
APLF-204ENST00000471727 DCAF12L1Q5VU92 463 aa11.41□□□□□ -0.58
APLF-204ENST00000471727 DUPD1Q68J44 220 aa11.41□□□□□ -0.58
APLF-204ENST00000471727 KCNV1Q6PIU1 500 aa11.41□□□□□ -0.58
APLF-204ENST00000471727 LBX2Q6XYB7 198 aa11.41□□□□□ -0.58
APLF-204ENST00000471727 SLC47A2Q86VL8 602 aa11.41□□□□□ -0.58
APLF-204ENST00000471727 ANKRD35Q8N283 1001 aa11.41□□□□□ -0.58
APLF-204ENST00000471727 DDX1Q92499 740 aaKnown RBP11.41□□□□□ -0.58
APLF-204ENST00000471727 KAT5Q92993 513 aa11.41□□□□□ -0.58
APLF-204ENST00000471727 CD101Q93033 1021 aa11.41□□□□□ -0.58
APLF-204ENST00000471727 ARL8AQ96BM9 186 aa11.41□□□□□ -0.58
APLF-204ENST00000471727 ZNF653Q96CK0 615 aa11.41□□□□□ -0.58
APLF-204ENST00000471727 FAM167AQ96KS9 214 aa11.41□□□□□ -0.58
APLF-204ENST00000471727 FAM213AQ9BRX8 229 aa11.41□□□□□ -0.58
APLF-204ENST00000471727 KIFC3Q9BVG8 833 aa11.41□□□□□ -0.58
APLF-204ENST00000471727 NUP85Q9BW27 656 aa11.41□□□□□ -0.58
APLF-204ENST00000471727 TMBIM4Q9HC24 238 aa11.41□□□□□ -0.58
APLF-204ENST00000471727 LCMT1Q9UIC8 334 aa11.41□□□□□ -0.58
APLF-204ENST00000471727 TRPC6Q9Y210 931 aa11.41□□□□□ -0.58
APLF-204ENST00000471727 PLAAQ9Y263 795 aa11.41□□□□□ -0.58
APLF-204ENST00000471727 ADGRA3Q8IWK6 1321 aa11.4□□□□□ -0.58
APLF-204ENST00000471727 EIF3HO15372 352 aaKnown RBP eCLIP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms