RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-208ENST00000471250 A0A0U1RQJ8 604 aa28.11■■■□□ 2.09
U2AF1-208ENST00000471250 WNT7BP56706 349 aa28.11■■■□□ 2.09
U2AF1-208ENST00000471250 ETF1P62495 437 aaKnown RBP28.11■■■□□ 2.09
U2AF1-208ENST00000471250 CDC42EP1Q00587 391 aa28.11■■■□□ 2.09
U2AF1-208ENST00000471250 KLHL30Q0D2K2 578 aa28.11■■■□□ 2.09
U2AF1-208ENST00000471250 HIC1Q14526 733 aa28.11■■■□□ 2.09
U2AF1-208ENST00000471250 TDRD12Q587J7 1177 aaKnown RBP28.11■■■□□ 2.09
U2AF1-208ENST00000471250 SRGAP1Q7Z6B7 1085 aa28.11■■■□□ 2.09
U2AF1-208ENST00000471250 BRSK2Q8IWQ3 736 aa28.11■■■□□ 2.09
U2AF1-208ENST00000471250 CD99L2Q8TCZ2 262 aa28.11■■■□□ 2.09
U2AF1-208ENST00000471250 ATRIPQ8WXE1 791 aa28.11■■■□□ 2.09
U2AF1-208ENST00000471250 SEMA4DQ92854 862 aa28.11■■■□□ 2.09
U2AF1-208ENST00000471250 VTI1AQ96AJ9 217 aa28.11■■■□□ 2.09
U2AF1-208ENST00000471250 PDE11AQ9HCR9 933 aa28.11■■■□□ 2.09
U2AF1-208ENST00000471250 BZW2Q9Y6E2 419 aaKnown RBP28.11■■■□□ 2.09
U2AF1-208ENST00000471250 TULP1O00294 542 aaPredicted RBP28.1■■■□□ 2.09
U2AF1-208ENST00000471250 IPO7O95373 1038 aaKnown RBP28.1■■■□□ 2.09
U2AF1-208ENST00000471250 CYP2C9P11712 490 aa28.1■■■□□ 2.09
U2AF1-208ENST00000471250 PRKCIP41743 596 aa28.1■■■□□ 2.09
U2AF1-208ENST00000471250 ZNF662Q6ZS27 426 aa28.1■■■□□ 2.09
U2AF1-208ENST00000471250 FBXL13Q8NEE6 735 aa28.1■■■□□ 2.09
U2AF1-208ENST00000471250 CGRRF1Q99675 332 aa28.1■■■□□ 2.09
U2AF1-208ENST00000471250 LZTFL1Q9NQ48 299 aa28.1■■■□□ 2.09
U2AF1-208ENST00000471250 AKR1B10O60218 316 aa28.1■■■□□ 2.09
U2AF1-208ENST00000471250 LRRN2O75325 713 aa28.1■■■□□ 2.09
U2AF1-208ENST00000471250 ARHGAP25P42331 645 aa28.1■■■□□ 2.09
U2AF1-208ENST00000471250 DRAP1Q14919 205 aaPredicted RBP28.1■■■□□ 2.09
U2AF1-208ENST00000471250 TMEM132AQ24JP5 1023 aa28.1■■■□□ 2.09
U2AF1-208ENST00000471250 EEF1DP3Q658K8 133 aa28.1■■■□□ 2.09
U2AF1-208ENST00000471250 PPP1R13LQ8WUF5 828 aa28.1■■■□□ 2.09
U2AF1-208ENST00000471250 GPR88Q9GZN0 384 aa28.1■■■□□ 2.09
U2AF1-208ENST00000471250 ADAMTS10Q9H324 1103 aa28.1■■■□□ 2.09
U2AF1-208ENST00000471250 SPC25Q9HBM1 224 aa28.1■■■□□ 2.09
U2AF1-208ENST00000471250 RAB20Q9NX57 234 aa28.1■■■□□ 2.09
U2AF1-208ENST00000471250 CPSF3Q9UKF6 684 aaKnown RBP28.1■■■□□ 2.09
U2AF1-208ENST00000471250 F8VZ95 297 aa28.09■■■□□ 2.09
U2AF1-208ENST00000471250 ZNF263O14978 683 aa28.09■■■□□ 2.09
U2AF1-208ENST00000471250 C4BPAP04003 597 aaKnown RBP28.09■■■□□ 2.09
U2AF1-208ENST00000471250 RARBP10826 455 aa28.09■■■□□ 2.09
U2AF1-208ENST00000471250 FERP16591 822 aa28.09■■■□□ 2.09
U2AF1-208ENST00000471250 TNNI1P19237 187 aa28.09■■■□□ 2.09
U2AF1-208ENST00000471250 HOXC8P31273 242 aa28.09■■■□□ 2.09
U2AF1-208ENST00000471250 SOX5P35711 763 aa28.09■■■□□ 2.09
U2AF1-208ENST00000471250 TNFSF9P41273 254 aa28.09■■■□□ 2.09
U2AF1-208ENST00000471250 ARID5AQ03989 594 aa28.09■■■□□ 2.09
U2AF1-208ENST00000471250 SPA17Q15506 151 aa28.09■■■□□ 2.09
U2AF1-208ENST00000471250 ZNF568Q3ZCX4 644 aa28.09■■■□□ 2.09
U2AF1-208ENST00000471250 SEZ6Q53EL9 994 aa28.09■■■□□ 2.09
U2AF1-208ENST00000471250 GNASQ5JWF2 1037 aa28.09■■■□□ 2.09
U2AF1-208ENST00000471250 FMNL3Q8IVF7 1028 aa28.09■■■□□ 2.09
U2AF1-208ENST00000471250 ARHGEF19Q8IW93 802 aa28.09■■■□□ 2.09
U2AF1-208ENST00000471250 TAS1R2Q8TE23 839 aa28.09■■■□□ 2.09
U2AF1-208ENST00000471250 MTG1Q9BT17 334 aaPredicted RBP28.09■■■□□ 2.09
U2AF1-208ENST00000471250 R3HCC1Q9Y3T6 440 aaKnown RBP28.09■■■□□ 2.09
U2AF1-208ENST00000471250 ZACNQ401N2 412 aa28.08■■■□□ 2.09
U2AF1-208ENST00000471250 SYT10Q6XYQ8 523 aa28.08■■■□□ 2.09
U2AF1-208ENST00000471250 RUFY4Q6ZNE9 571 aa28.08■■■□□ 2.09
U2AF1-208ENST00000471250 ZNF592Q92610 1267 aa28.08■■■□□ 2.09
U2AF1-208ENST00000471250 SCLT1Q96NL6 688 aa28.08■■■□□ 2.09
U2AF1-208ENST00000471250 FAM49AQ9H0Q0 323 aaPredicted RBP28.08■■■□□ 2.09
U2AF1-208ENST00000471250 CDT1Q9H211 546 aa28.08■■■□□ 2.09
U2AF1-208ENST00000471250 HAUS4Q9H6D7 363 aa28.08■■■□□ 2.09
U2AF1-208ENST00000471250 UBE2TQ9NPD8 197 aaPredicted RBP28.08■■■□□ 2.09
U2AF1-208ENST00000471250 HDAC6Q9UBN7 1215 aa28.08■■■□□ 2.09
U2AF1-208ENST00000471250 C17orf102A2RUQ5 167 aa28.07■■■□□ 2.08
U2AF1-208ENST00000471250 GPR25O00155 361 aa28.07■■■□□ 2.08
U2AF1-208ENST00000471250 CSDE1O75534 798 aaKnown RBP28.07■■■□□ 2.08
U2AF1-208ENST00000471250 ELNP15502 786 aa28.07■■■□□ 2.08
U2AF1-208ENST00000471250 ARHGAP29Q52LW3 1261 aa28.07■■■□□ 2.08
U2AF1-208ENST00000471250 KIF18AQ8NI77 898 aa28.07■■■□□ 2.08
U2AF1-208ENST00000471250 PAXBP1Q9Y5B6 917 aa28.07■■■□□ 2.08
U2AF1-208ENST00000471250 RBAK-RBAKDNI3L0D1 243 aa28.07■■■□□ 2.08
U2AF1-208ENST00000471250 GPR32O75388 356 aa28.07■■■□□ 2.08
U2AF1-208ENST00000471250 PGK1P00558 417 aa28.07■■■□□ 2.08
U2AF1-208ENST00000471250 GNAT1P11488 350 aa28.07■■■□□ 2.08
U2AF1-208ENST00000471250 PRKAR2AP13861 404 aaKnown RBP28.07■■■□□ 2.08
U2AF1-208ENST00000471250 CCND3P30281 292 aaPredicted RBP28.07■■■□□ 2.08
U2AF1-208ENST00000471250 CYP27A1Q02318 531 aa28.07■■■□□ 2.08
U2AF1-208ENST00000471250 SURF1Q15526 300 aa28.07■■■□□ 2.08
U2AF1-208ENST00000471250 LMBRD2Q68DH5 695 aaPredicted RBP28.07■■■□□ 2.08
U2AF1-208ENST00000471250 PTPRJQ12913 1337 aa28.06■■■□□ 2.08
U2AF1-208ENST00000471250 TREHO43280 583 aa28.06■■■□□ 2.08
U2AF1-208ENST00000471250 ZC3H11AO75152 810 aaKnown RBP eCLIP28.06■■■□□ 2.08
U2AF1-208ENST00000471250 ADAMTS4O75173 837 aa28.06■■■□□ 2.08
U2AF1-208ENST00000471250 GFPT2O94808 682 aa28.06■■■□□ 2.08
U2AF1-208ENST00000471250 GNRH1P01148 92 aa28.06■■■□□ 2.08
U2AF1-208ENST00000471250 MCF2P10911 925 aa28.06■■■□□ 2.08
U2AF1-208ENST00000471250 KIAA1328Q86T90 577 aa28.06■■■□□ 2.08
U2AF1-208ENST00000471250 C7orf31Q8N865 590 aa28.06■■■□□ 2.08
U2AF1-208ENST00000471250 GCOM2Q9BZD3 368 aaPredicted RBP28.06■■■□□ 2.08
U2AF1-208ENST00000471250 PDZD7Q9H5P4 517 aa28.06■■■□□ 2.08
U2AF1-208ENST00000471250 PCDHA13Q9Y5I0 950 aa28.06■■■□□ 2.08
U2AF1-208ENST00000471250 THSD7BQ9C0I4 1608 aa28.05■■■□□ 2.08
U2AF1-208ENST00000471250 TSPAN1O60635 241 aa28.05■■■□□ 2.08
U2AF1-208ENST00000471250 ARF4P18085 180 aaPredicted RBP28.05■■■□□ 2.08
U2AF1-208ENST00000471250 ANXA13P27216 316 aa28.05■■■□□ 2.08
U2AF1-208ENST00000471250 VAV2P52735 878 aa28.05■■■□□ 2.08
U2AF1-208ENST00000471250 AP3M2P53677 418 aa28.05■■■□□ 2.08
U2AF1-208ENST00000471250 ARHGAP44Q17R89 818 aa28.05■■■□□ 2.08
U2AF1-208ENST00000471250 KIZQ2M2Z5 673 aa28.05■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms