RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 EFHC2Q5JST6 749 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 SCARA3Q6AZY7 606 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 TWF2Q6IBS0 349 aaKnown RBP7.26□□□□□ -1.25
BRCA1-210ENST00000471181 PDXDC2PQ6P474 469 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 RHPN2Q8IUC4 686 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 TRIM48Q8IWZ4 208 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 GRAMD1CQ8IYS0 662 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 FANCBQ8NB91 859 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 C19orf18Q8NEA5 215 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 AMNQ9BXJ7 453 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 FANCEQ9HB96 536 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 RICTORQ6R327 1708 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 DGKIO75912 1065 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 CYBBP04839 570 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 S100A9P06702 114 aaKnown RBP7.26□□□□□ -1.25
BRCA1-210ENST00000471181 UBTFL6P0CB48 400 aaPredicted RBP7.26□□□□□ -1.25
BRCA1-210ENST00000471181 CCDC130P13994 396 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 GPS1Q13098 491 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 EIF4A2Q14240 407 aaKnown RBP7.26□□□□□ -1.25
BRCA1-210ENST00000471181 CASP8Q14790 479 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 ME3Q16798 604 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 LRRC24Q50LG9 513 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 SNX30Q5VWJ9 437 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 FBXO31Q5XUX0 539 aaPredicted RBP7.26□□□□□ -1.25
BRCA1-210ENST00000471181 KRT74Q7RTS7 529 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 LONP2Q86WA8 852 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 GSPT2Q8IYD1 628 aaKnown RBP7.26□□□□□ -1.25
BRCA1-210ENST00000471181 EFHBQ8N7U6 833 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 TSPYL6Q8N831 410 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 KBTBD3Q8NAB2 608 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 ATP6V1HQ9UI12 483 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 PPIEQ9UNP9 301 aaKnown RBP7.26□□□□□ -1.25
BRCA1-210ENST00000471181 ADGBQ8N7X0 1667 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 DIP2BQ9P265 1576 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 IKBKBO14920 756 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 RPN2P04844 631 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 LCP1P13796 627 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 KCNA3P22001 575 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 GYG1P46976 350 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 BCAMP50895 628 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 ZNF445P59923 1031 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 KIF23Q02241 960 aaPredicted RBP7.26□□□□□ -1.25
BRCA1-210ENST00000471181 GSTA3Q16772 222 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 ZNF699Q32M78 642 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 ARMCX4Q5H9R4 360 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 IFNL3Q8IZI9 196 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 HS6ST3Q8IZP7 471 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 DHTKD1Q96HY7 919 aaPredicted RBP7.26□□□□□ -1.25
BRCA1-210ENST00000471181 PIGUQ9H490 435 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 PLEKHA5Q9HAU0 1116 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 ADAM22Q9P0K1 906 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 POLG2Q9UHN1 485 aa7.26□□□□□ -1.25
BRCA1-210ENST00000471181 ALOX15P16050 662 aaPredicted RBP7.25□□□□□ -1.25
BRCA1-210ENST00000471181 YWHAQP27348 245 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 CHI3L1P36222 383 aaPredicted RBP7.25□□□□□ -1.25
BRCA1-210ENST00000471181 PSMC5P62195 406 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 NBPF9Q3BBW0 867 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 FAM45BPQ6NSW5 357 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 LRRC49Q8IUZ0 686 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 FAM45AQ8TCE6 357 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 MRPL1Q9BYD6 325 aaKnown RBP7.25□□□□□ -1.25
BRCA1-210ENST00000471181 MAGEF1Q9HAY2 307 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 TUFT1Q9NNX1 390 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 PCDHA7Q9UN72 937 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 PCDHA4Q9UN74 947 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 RALAP11233 206 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 CMA1P23946 247 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 ABCD1P33897 745 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 GPC3P51654 580 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 NR1H3Q13133 447 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 CCNIQ14094 377 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 GCKRQ14397 625 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 ZNF618Q5T7W0 954 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 ESRP1Q6NXG1 681 aaKnown RBP7.25□□□□□ -1.25
BRCA1-210ENST00000471181 TOGARAM2Q6ZUX3 1019 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 SUCLG2Q96I99 432 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 CLMNQ96JQ2 1002 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 TRIM62Q9BVG3 475 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 AVENQ9NQS1 362 aaPredicted RBP7.25□□□□□ -1.25
BRCA1-210ENST00000471181 SPASTQ9UBP0 616 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 TJP2Q9UDY2 1190 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 CNOT8Q9UFF9 292 aaKnown RBP7.25□□□□□ -1.25
BRCA1-210ENST00000471181 NRBP1Q9UHY1 535 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.25□□□□□ -1.25
BRCA1-210ENST00000471181 BTBD18B2RXH4 712 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 DNALI1O14645 258 aaPredicted RBP7.25□□□□□ -1.25
BRCA1-210ENST00000471181 ATP8B1O43520 1251 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 PALMO75781 387 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 SEC24BO95487 1268 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 PSMC3P17980 439 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 ITGA3P26006 1051 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 AP3B2Q13367 1082 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 TFDP2Q14188 446 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 DGKKQ5KSL6 1271 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 PPP4R3CPQ6ZMV5 832 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 ANKMY2Q8IV38 441 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 CDKL3Q8IVW4 592 aaPredicted RBP7.25□□□□□ -1.25
BRCA1-210ENST00000471181 DPP10Q8N608 796 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 MOSPD2Q8NHP6 518 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 USP33Q8TEY7 942 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms