RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 PCDHGA12O60330 932 aa5.26□□□□□ -1.57
BRCA2-202ENST00000470094 C1SP09871 688 aa5.26□□□□□ -1.57
BRCA2-202ENST00000470094 IL2RBP14784 551 aa5.26□□□□□ -1.57
BRCA2-202ENST00000470094 C5AR1P21730 350 aa5.26□□□□□ -1.57
BRCA2-202ENST00000470094 SP140Q13342 867 aa5.26□□□□□ -1.57
BRCA2-202ENST00000470094 SEPT2Q15019 361 aa5.26□□□□□ -1.57
BRCA2-202ENST00000470094 EFCAB2Q5VUJ9 269 aa5.26□□□□□ -1.57
BRCA2-202ENST00000470094 MIGA2Q7L4E1 593 aa5.26□□□□□ -1.57
BRCA2-202ENST00000470094 FBXO18Q8NFZ0 1043 aa5.26□□□□□ -1.57
BRCA2-202ENST00000470094 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.26□□□□□ -1.57
BRCA2-202ENST00000470094 NRG4Q8WWG1 115 aa5.26□□□□□ -1.57
BRCA2-202ENST00000470094 CYFIP2Q96F07 1278 aa5.26□□□□□ -1.57
BRCA2-202ENST00000470094 TEKT5Q96M29 485 aa5.26□□□□□ -1.57
BRCA2-202ENST00000470094 ZNF747Q9BV97 191 aa5.26□□□□□ -1.57
BRCA2-202ENST00000470094 ZNF341Q9BYN7 854 aa5.26□□□□□ -1.57
BRCA2-202ENST00000470094 ZNF703Q9H7S9 590 aaPredicted RBP5.26□□□□□ -1.57
BRCA2-202ENST00000470094 MANSC1Q9H8J5 431 aa5.26□□□□□ -1.57
BRCA2-202ENST00000470094 TMEM140Q9NV12 185 aa5.26□□□□□ -1.57
BRCA2-202ENST00000470094 MOCS1Q9NZB8 636 aa5.26□□□□□ -1.57
BRCA2-202ENST00000470094 INTUQ9ULD6 942 aa5.26□□□□□ -1.57
BRCA2-202ENST00000470094 PCDHGA9Q9Y5G4 932 aaKnown RBP5.26□□□□□ -1.57
BRCA2-202ENST00000470094 PCDHGA8Q9Y5G5 932 aa5.26□□□□□ -1.57
BRCA2-202ENST00000470094 PCDHGA7Q9Y5G6 932 aa5.26□□□□□ -1.57
BRCA2-202ENST00000470094 PCDHGA6Q9Y5G7 932 aa5.26□□□□□ -1.57
BRCA2-202ENST00000470094 PCDHGA3Q9Y5H0 932 aa5.26□□□□□ -1.57
BRCA2-202ENST00000470094 TBKBP1A7MCY6 615 aa5.25□□□□□ -1.57
BRCA2-202ENST00000470094 PJA2O43164 708 aa5.25□□□□□ -1.57
BRCA2-202ENST00000470094 SNRPA1P09661 255 aaKnown RBP5.25□□□□□ -1.57
BRCA2-202ENST00000470094 RAP2AP10114 183 aa5.25□□□□□ -1.57
BRCA2-202ENST00000470094 MGAT1P26572 445 aa5.25□□□□□ -1.57
BRCA2-202ENST00000470094 EXOSC10Q01780 885 aaKnown RBP5.25□□□□□ -1.57
BRCA2-202ENST00000470094 MIIPQ5JXC2 388 aa5.25□□□□□ -1.57
BRCA2-202ENST00000470094 ANKS6Q68DC2 871 aa5.25□□□□□ -1.57
BRCA2-202ENST00000470094 EFCAB12Q6NXP0 572 aa5.25□□□□□ -1.57
BRCA2-202ENST00000470094 GPRIN1Q7Z2K8 1008 aa5.25□□□□□ -1.57
BRCA2-202ENST00000470094 OR2I1PQ8NGU4 316 aa5.25□□□□□ -1.57
BRCA2-202ENST00000470094 ZFP28Q8NHY6 868 aa5.25□□□□□ -1.57
BRCA2-202ENST00000470094 CACTINQ8WUQ7 758 aaKnown RBP5.25□□□□□ -1.57
BRCA2-202ENST00000470094 TFAP2CQ92754 450 aa5.25□□□□□ -1.57
BRCA2-202ENST00000470094 DPF2Q92785 391 aa5.25□□□□□ -1.57
BRCA2-202ENST00000470094 ZNF503Q96F45 646 aa5.25□□□□□ -1.57
BRCA2-202ENST00000470094 FAM193BQ96PV7 902 aaPredicted RBP5.25□□□□□ -1.57
BRCA2-202ENST00000470094 LDAHQ9H6V9 325 aa5.25□□□□□ -1.57
BRCA2-202ENST00000470094 TYW1Q9NV66 732 aaKnown RBP5.25□□□□□ -1.57
BRCA2-202ENST00000470094 CEP72Q9P209 647 aa5.25□□□□□ -1.57
BRCA2-202ENST00000470094 POGKQ9P215 609 aa5.25□□□□□ -1.57
BRCA2-202ENST00000470094 EIF2B4Q9UI10 523 aaKnown RBP5.25□□□□□ -1.57
BRCA2-202ENST00000470094 TUBD1Q9UJT1 453 aa5.25□□□□□ -1.57
BRCA2-202ENST00000470094 AJAP1Q9UKB5 411 aaPredicted RBP5.25□□□□□ -1.57
BRCA2-202ENST00000470094 CXorf49A8MYA2 514 aaPredicted RBP5.24□□□□□ -1.57
BRCA2-202ENST00000470094 GPR32O75388 356 aa5.24□□□□□ -1.57
BRCA2-202ENST00000470094 RECQL4O94761 1208 aa5.24□□□□□ -1.57
BRCA2-202ENST00000470094 SNUPNO95149 360 aaKnown RBP5.24□□□□□ -1.57
BRCA2-202ENST00000470094 C6P13671 934 aa5.24□□□□□ -1.57
BRCA2-202ENST00000470094 ALOX15P16050 662 aaPredicted RBP5.24□□□□□ -1.57
BRCA2-202ENST00000470094 TACR2P21452 398 aa5.24□□□□□ -1.57
BRCA2-202ENST00000470094 GUCY1A2P33402 732 aa5.24□□□□□ -1.57
BRCA2-202ENST00000470094 WASP42768 502 aa5.24□□□□□ -1.57
BRCA2-202ENST00000470094 SLC6A9P48067 706 aa5.24□□□□□ -1.57
BRCA2-202ENST00000470094 CLRN1P58418 232 aa5.24□□□□□ -1.57
BRCA2-202ENST00000470094 DGCR2P98153 550 aa5.24□□□□□ -1.57
BRCA2-202ENST00000470094 KIF23Q02241 960 aaPredicted RBP5.24□□□□□ -1.57
BRCA2-202ENST00000470094 TOB2Q14106 344 aaPredicted RBP5.24□□□□□ -1.57
BRCA2-202ENST00000470094 BMT2Q1RMZ1 405 aa5.24□□□□□ -1.57
BRCA2-202ENST00000470094 LSM12Q3MHD2 195 aaKnown RBP5.24□□□□□ -1.57
BRCA2-202ENST00000470094 RABL3Q5HYI8 236 aa5.24□□□□□ -1.57
BRCA2-202ENST00000470094 RRP12Q5JTH9 1297 aaKnown RBP5.24□□□□□ -1.57
BRCA2-202ENST00000470094 AFMIDQ63HM1 303 aa5.24□□□□□ -1.57
BRCA2-202ENST00000470094 DRICH1Q6PGQ1 229 aaPredicted RBP5.24□□□□□ -1.57
BRCA2-202ENST00000470094 CRIP3Q6Q6R5 217 aa5.24□□□□□ -1.57
BRCA2-202ENST00000470094 ZBTB46Q86UZ6 589 aa5.24□□□□□ -1.57
BRCA2-202ENST00000470094 RHOT1Q8IXI2 618 aa5.24□□□□□ -1.57
BRCA2-202ENST00000470094 RNF169Q8NCN4 708 aa5.24□□□□□ -1.57
BRCA2-202ENST00000470094 OR10H5Q8NGA6 315 aa5.24□□□□□ -1.57
BRCA2-202ENST00000470094 CCHCR1Q8TD31 782 aa5.24□□□□□ -1.57
BRCA2-202ENST00000470094 CASKIN2Q8WXE0 1202 aa5.24□□□□□ -1.57
BRCA2-202ENST00000470094 STON2Q8WXE9 905 aa5.24□□□□□ -1.57
BRCA2-202ENST00000470094 HDAC10Q969S8 669 aa5.24□□□□□ -1.57
BRCA2-202ENST00000470094 CEP89Q96ST8 783 aa5.24□□□□□ -1.57
BRCA2-202ENST00000470094 NDC1Q9BTX1 674 aa5.24□□□□□ -1.57
BRCA2-202ENST00000470094 KCNH6Q9H252 994 aa5.24□□□□□ -1.57
BRCA2-202ENST00000470094 SORCS3Q9UPU3 1222 aa5.24□□□□□ -1.57
BRCA2-202ENST00000470094 SIK3Q9Y2K2 1263 aa5.24□□□□□ -1.57
BRCA2-202ENST00000470094 TRIM24O15164 1050 aa5.23□□□□□ -1.57
BRCA2-202ENST00000470094 TEX33O43247 280 aa5.23□□□□□ -1.57
BRCA2-202ENST00000470094 FAM20BO75063 409 aa5.23□□□□□ -1.57
BRCA2-202ENST00000470094 SCAF4O95104 1147 aaKnown RBP5.23□□□□□ -1.57
BRCA2-202ENST00000470094 ATP5JP18859 108 aa5.23□□□□□ -1.57
BRCA2-202ENST00000470094 RECQLP46063 649 aaPredicted RBP5.23□□□□□ -1.57
BRCA2-202ENST00000470094 RAP2BP61225 183 aa5.23□□□□□ -1.57
BRCA2-202ENST00000470094 ZXDAP98168 799 aa5.23□□□□□ -1.57
BRCA2-202ENST00000470094 TUBA3CQ13748 450 aa5.23□□□□□ -1.57
BRCA2-202ENST00000470094 UAP1L1Q3KQV9 507 aa5.23□□□□□ -1.57
BRCA2-202ENST00000470094 ATXN7L2Q5T6C5 722 aaPredicted RBP5.23□□□□□ -1.57
BRCA2-202ENST00000470094 TUBA3EQ6PEY2 450 aa5.23□□□□□ -1.57
BRCA2-202ENST00000470094 SLC35B2Q8TB61 432 aa5.23□□□□□ -1.57
BRCA2-202ENST00000470094 CPT1CQ8TCG5 803 aa5.23□□□□□ -1.57
BRCA2-202ENST00000470094 CHMP4CQ96CF2 233 aa5.23□□□□□ -1.57
BRCA2-202ENST00000470094 MRI1Q9BV20 369 aa5.23□□□□□ -1.57
BRCA2-202ENST00000470094 ATRNL1Q5VV63 1379 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms