RNA–Protein interactions for RNA: ENST00000469670.1

TTC28-205, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-205ENST00000469670 CCL16O15467 120 aa20.3■□□□□ 0.84
TTC28-205ENST00000469670 LILRB5O75023 590 aa20.3■□□□□ 0.84
TTC28-205ENST00000469670 C8AP07357 584 aa20.3■□□□□ 0.84
TTC28-205ENST00000469670 CCT2P78371 535 aaKnown RBP20.3■□□□□ 0.84
TTC28-205ENST00000469670 MXD4Q14582 209 aaPredicted RBP20.3■□□□□ 0.84
TTC28-205ENST00000469670 XKR9Q5GH70 373 aa20.3■□□□□ 0.84
TTC28-205ENST00000469670 BMP2KLQ5H9B9 411 aa20.3■□□□□ 0.84
TTC28-205ENST00000469670 ZBTB41Q5SVQ8 909 aa20.3■□□□□ 0.84
TTC28-205ENST00000469670 FBXL16Q8N461 479 aa20.3■□□□□ 0.84
TTC28-205ENST00000469670 NELL1Q92832 810 aa20.3■□□□□ 0.84
TTC28-205ENST00000469670 FAM20AQ96MK3 541 aa20.3■□□□□ 0.84
TTC28-205ENST00000469670 YTHDC1Q96MU7 727 aaKnown RBP20.3■□□□□ 0.84
TTC28-205ENST00000469670 KXD1Q9BQD3 176 aa20.3■□□□□ 0.84
TTC28-205ENST00000469670 CLSTN3Q9BQT9 956 aa20.3■□□□□ 0.84
TTC28-205ENST00000469670 LXNQ9BS40 222 aa20.3■□□□□ 0.84
TTC28-205ENST00000469670 PHF20Q9BVI0 1012 aa20.3■□□□□ 0.84
TTC28-205ENST00000469670 KLK14Q9P0G3 267 aa20.3■□□□□ 0.84
TTC28-205ENST00000469670 CACNG4Q9UBN1 327 aa20.3■□□□□ 0.84
TTC28-205ENST00000469670 USP18Q9UMW8 372 aa20.3■□□□□ 0.84
TTC28-205ENST00000469670 ACACBO00763 2458 aa20.3■□□□□ 0.84
TTC28-205ENST00000469670 DCDC2BA2VCK2 349 aa20.29■□□□□ 0.84
TTC28-205ENST00000469670 XYLBO75191 536 aa20.29■□□□□ 0.84
TTC28-205ENST00000469670 ARF4P18085 180 aaPredicted RBP20.29■□□□□ 0.84
TTC28-205ENST00000469670 HOXA9P31269 272 aa20.29■□□□□ 0.84
TTC28-205ENST00000469670 MBTD1Q05BQ5 628 aa20.29■□□□□ 0.84
TTC28-205ENST00000469670 TFDP1Q14186 410 aa20.29■□□□□ 0.84
TTC28-205ENST00000469670 HSP90AA2PQ14568 343 aaPredicted RBP20.29■□□□□ 0.84
TTC28-205ENST00000469670 EPHA7Q15375 998 aa20.29■□□□□ 0.84
TTC28-205ENST00000469670 AMHR2Q16671 573 aa20.29■□□□□ 0.84
TTC28-205ENST00000469670 INF2Q27J81 1249 aa20.29■□□□□ 0.84
TTC28-205ENST00000469670 TSSK4Q6SA08 328 aa20.29■□□□□ 0.84
TTC28-205ENST00000469670 IFNLR1Q8IU57 520 aaPredicted RBP20.29■□□□□ 0.84
TTC28-205ENST00000469670 TRIM22Q8IYM9 498 aa20.29■□□□□ 0.84
TTC28-205ENST00000469670 DAGLBQ8NCG7 672 aa20.29■□□□□ 0.84
TTC28-205ENST00000469670 CLDN23Q96B33 292 aa20.29■□□□□ 0.84
TTC28-205ENST00000469670 RTKNQ9BST9 563 aa20.29■□□□□ 0.84
TTC28-205ENST00000469670 TTPALQ9BTX7 342 aa20.29■□□□□ 0.84
TTC28-205ENST00000469670 AGXT2Q9BYV1 514 aa20.29■□□□□ 0.84
TTC28-205ENST00000469670 KCNMB3Q9NPA1 279 aa20.29■□□□□ 0.84
TTC28-205ENST00000469670 XPNPEP1Q9NQW7 623 aa20.29■□□□□ 0.84
TTC28-205ENST00000469670 PARP2Q9UGN5 583 aa20.29■□□□□ 0.84
TTC28-205ENST00000469670 MTCL1Q9Y4B5 1905 aaKnown RBP20.28■□□□□ 0.84
TTC28-205ENST00000469670 ZBTB39O15060 712 aa20.28■□□□□ 0.84
TTC28-205ENST00000469670 NCAM2O15394 837 aa20.28■□□□□ 0.84
TTC28-205ENST00000469670 TBC1D4O60343 1298 aa20.28■□□□□ 0.84
TTC28-205ENST00000469670 TGM1P22735 817 aa20.28■□□□□ 0.84
TTC28-205ENST00000469670 TARSP26639 723 aaKnown RBP20.28■□□□□ 0.84
TTC28-205ENST00000469670 PDIA3P30101 505 aaKnown RBP20.28■□□□□ 0.84
TTC28-205ENST00000469670 SSRP1Q08945 709 aaKnown RBP20.28■□□□□ 0.84
TTC28-205ENST00000469670 NPY5RQ15761 445 aa20.28■□□□□ 0.84
TTC28-205ENST00000469670 PSMD5Q16401 504 aa20.28■□□□□ 0.84
TTC28-205ENST00000469670 TPRG1Q6ZUI0 275 aa20.28■□□□□ 0.84
TTC28-205ENST00000469670 CDR2LQ86X02 465 aaPredicted RBP20.28■□□□□ 0.84
TTC28-205ENST00000469670 CEP57Q86XR8 500 aa20.28■□□□□ 0.84
TTC28-205ENST00000469670 LNX1Q8TBB1 728 aaPredicted RBP20.28■□□□□ 0.84
TTC28-205ENST00000469670 HASPINQ8TF76 798 aa20.28■□□□□ 0.84
TTC28-205ENST00000469670 PIK3R5Q8WYR1 880 aa20.28■□□□□ 0.84
TTC28-205ENST00000469670 KCNB2Q92953 911 aa20.28■□□□□ 0.84
TTC28-205ENST00000469670 NELL2Q99435 816 aa20.28■□□□□ 0.84
TTC28-205ENST00000469670 PAAF1Q9BRP4 392 aa20.28■□□□□ 0.84
TTC28-205ENST00000469670 RGL1Q9NZL6 768 aa20.28■□□□□ 0.84
TTC28-205ENST00000469670 SPTBN2O15020 2390 aa20.28■□□□□ 0.84
TTC28-205ENST00000469670 ZMYM2Q9UBW7 1377 aa20.27■□□□□ 0.84
TTC28-205ENST00000469670 NPTXRO95502 500 aa20.27■□□□□ 0.84
TTC28-205ENST00000469670 RPS6KB1P23443 525 aa20.27■□□□□ 0.84
TTC28-205ENST00000469670 RPS9P46781 194 aaKnown RBP20.27■□□□□ 0.84
TTC28-205ENST00000469670 POU5F1BQ06416 359 aa20.27■□□□□ 0.84
TTC28-205ENST00000469670 FAM171A1Q5VUB5 890 aa20.27■□□□□ 0.84
TTC28-205ENST00000469670 SLC27A1Q6PCB7 646 aa20.27■□□□□ 0.84
TTC28-205ENST00000469670 KRT25Q7Z3Z0 450 aa20.27■□□□□ 0.84
TTC28-205ENST00000469670 NPAS3Q8IXF0 933 aa20.27■□□□□ 0.84
TTC28-205ENST00000469670 DYDC2Q96IM9 177 aa20.27■□□□□ 0.84
TTC28-205ENST00000469670 ZSWIM4Q9H7M6 989 aa20.27■□□□□ 0.84
TTC28-205ENST00000469670 PRMT8Q9NR22 394 aaPredicted RBP20.27■□□□□ 0.84
TTC28-205ENST00000469670 SNX14Q9Y5W7 946 aa20.27■□□□□ 0.84
TTC28-205ENST00000469670 MIA3Q5JRA6 1907 aa20.27■□□□□ 0.84
TTC28-205ENST00000469670 MYH15Q9Y2K3 1946 aa20.26■□□□□ 0.83
TTC28-205ENST00000469670 ADAM12O43184 909 aa20.26■□□□□ 0.83
TTC28-205ENST00000469670 B4GALT5O43286 388 aa20.26■□□□□ 0.83
TTC28-205ENST00000469670 DEXIO95424 95 aa20.26■□□□□ 0.83
TTC28-205ENST00000469670 POU2F2P09086 479 aa20.26■□□□□ 0.83
TTC28-205ENST00000469670 IRX6P78412 446 aaPredicted RBP20.26■□□□□ 0.83
TTC28-205ENST00000469670 TUSC3Q13454 348 aa20.26■□□□□ 0.83
TTC28-205ENST00000469670 CAPSQ13938 189 aa20.26■□□□□ 0.83
TTC28-205ENST00000469670 CTTNQ14247 550 aaKnown RBP20.26■□□□□ 0.83
TTC28-205ENST00000469670 GALNT17Q6IS24 598 aa20.26■□□□□ 0.83
TTC28-205ENST00000469670 SLC7A14Q8TBB6 771 aa20.26■□□□□ 0.83
TTC28-205ENST00000469670 ASAP3Q8TDY4 903 aa20.26■□□□□ 0.83
TTC28-205ENST00000469670 PARD6AQ9NPB6 346 aa20.26■□□□□ 0.83
TTC28-205ENST00000469670 HCFC1R1Q9NWW0 138 aa20.26■□□□□ 0.83
TTC28-205ENST00000469670 GMEB2Q9UKD1 530 aa20.26■□□□□ 0.83
TTC28-205ENST00000469670 KCNH3Q9ULD8 1083 aa20.26■□□□□ 0.83
TTC28-205ENST00000469670 PATJQ8NI35 1801 aa20.25■□□□□ 0.83
TTC28-205ENST00000469670 CASTOR2A6NHX0 329 aa20.25■□□□□ 0.83
TTC28-205ENST00000469670 KIF4AO95239 1232 aa20.25■□□□□ 0.83
TTC28-205ENST00000469670 EVCP57679 992 aa20.25■□□□□ 0.83
TTC28-205ENST00000469670 CYP4A11Q02928 519 aa20.25■□□□□ 0.83
TTC28-205ENST00000469670 PABPC1LQ4VXU2 614 aaKnown RBP20.25■□□□□ 0.83
TTC28-205ENST00000469670 AXDND1Q5T1B0 1012 aaPredicted RBP20.25■□□□□ 0.83
TTC28-205ENST00000469670 NCAPH2Q6IBW4 605 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms