RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 KIF26AQ9ULI4 1882 aaPredicted RBP6□□□□□ -1.45
PTPN4-209ENST00000469511 COL4A2P08572 1712 aa5.99□□□□□ -1.45
PTPN4-209ENST00000469511 TRIP11Q15643 1979 aa5.99□□□□□ -1.45
PTPN4-209ENST00000469511 KANSL1LA0AUZ9 987 aa5.99□□□□□ -1.45
PTPN4-209ENST00000469511 A6NJY4 79 aa5.99□□□□□ -1.45
PTPN4-209ENST00000469511 C1QTNF9BB2RNN3 333 aa5.99□□□□□ -1.45
PTPN4-209ENST00000469511 NRG2O14511 850 aaPredicted RBP5.99□□□□□ -1.45
PTPN4-209ENST00000469511 SLC30A4O14863 429 aa5.99□□□□□ -1.45
PTPN4-209ENST00000469511 TEX28O15482 410 aa5.99□□□□□ -1.45
PTPN4-209ENST00000469511 LAMTOR5O43504 91 aa5.99□□□□□ -1.45
PTPN4-209ENST00000469511 OFD1O75665 1012 aa5.99□□□□□ -1.45
PTPN4-209ENST00000469511 TOP3BO95985 862 aaKnown RBP5.99□□□□□ -1.45
PTPN4-209ENST00000469511 RPLP2P05387 115 aaKnown RBP5.99□□□□□ -1.45
PTPN4-209ENST00000469511 C1QTNF9P0C862 333 aa5.99□□□□□ -1.45
PTPN4-209ENST00000469511 TDGF1P13385 188 aa5.99□□□□□ -1.45
PTPN4-209ENST00000469511 ZSCAN20P17040 1043 aaPredicted RBP5.99□□□□□ -1.45
PTPN4-209ENST00000469511 EIF4BP23588 611 aaKnown RBP5.99□□□□□ -1.45
PTPN4-209ENST00000469511 TARSP26639 723 aaKnown RBP5.99□□□□□ -1.45
PTPN4-209ENST00000469511 PMLP29590 882 aa5.99□□□□□ -1.45
PTPN4-209ENST00000469511 POLGP54098 1239 aaPredicted RBP5.99□□□□□ -1.45
PTPN4-209ENST00000469511 LMNB2Q03252 620 aa5.99□□□□□ -1.45
PTPN4-209ENST00000469511 DMWDQ09019 674 aa5.99□□□□□ -1.45
PTPN4-209ENST00000469511 SLC44A4Q53GD3 710 aa5.99□□□□□ -1.45
PTPN4-209ENST00000469511 ZNF484Q5JVG2 852 aa5.99□□□□□ -1.45
PTPN4-209ENST00000469511 EFCAB12Q6NXP0 572 aa5.99□□□□□ -1.45
PTPN4-209ENST00000469511 AGMOQ6ZNB7 445 aa5.99□□□□□ -1.45
PTPN4-209ENST00000469511 C15orf39Q6ZRI6 1047 aa5.99□□□□□ -1.45
PTPN4-209ENST00000469511 PALB2Q86YC2 1186 aa5.99□□□□□ -1.45
PTPN4-209ENST00000469511 TMEM87AQ8NBN3 555 aa5.99□□□□□ -1.45
PTPN4-209ENST00000469511 ATRIPQ8WXE1 791 aa5.99□□□□□ -1.45
PTPN4-209ENST00000469511 SMG7Q92540 1137 aaKnown RBP5.99□□□□□ -1.45
PTPN4-209ENST00000469511 CUL5Q93034 780 aa5.99□□□□□ -1.45
PTPN4-209ENST00000469511 COL26A1Q96A83 441 aa5.99□□□□□ -1.45
PTPN4-209ENST00000469511 SH2D3AQ9BRG2 576 aa5.99□□□□□ -1.45
PTPN4-209ENST00000469511 PLA2G2FQ9BZM2 168 aa5.99□□□□□ -1.45
PTPN4-209ENST00000469511 KRT23Q9C075 422 aa5.99□□□□□ -1.45
PTPN4-209ENST00000469511 GZF1Q9H116 711 aaPredicted RBP5.99□□□□□ -1.45
PTPN4-209ENST00000469511 PSTPIP2Q9H939 334 aa5.99□□□□□ -1.45
PTPN4-209ENST00000469511 LTB4R2Q9NPC1 389 aa5.99□□□□□ -1.45
PTPN4-209ENST00000469511 ZNF302Q9NR11 478 aa5.99□□□□□ -1.45
PTPN4-209ENST00000469511 SLC2A4RGQ9NR83 387 aa5.99□□□□□ -1.45
PTPN4-209ENST00000469511 RAB6BQ9NRW1 208 aa5.99□□□□□ -1.45
PTPN4-209ENST00000469511 MARCH5Q9NX47 278 aa5.99□□□□□ -1.45
PTPN4-209ENST00000469511 ZSCAN32Q9NX65 697 aa5.99□□□□□ -1.45
PTPN4-209ENST00000469511 SERTAD1Q9UHV2 236 aa5.99□□□□□ -1.45
PTPN4-209ENST00000469511 RCAN3Q9UKA8 241 aa5.99□□□□□ -1.45
PTPN4-209ENST00000469511 FBXO4Q9UKT5 387 aa5.99□□□□□ -1.45
PTPN4-209ENST00000469511 NFASCO94856 1347 aa5.99□□□□□ -1.45
PTPN4-209ENST00000469511 AKAP13Q12802 2813 aa5.98□□□□□ -1.45
PTPN4-209ENST00000469511 COL1A2P08123 1366 aa5.98□□□□□ -1.45
PTPN4-209ENST00000469511 TMEM150BA6NC51 233 aa5.98□□□□□ -1.45
PTPN4-209ENST00000469511 FAM86B1E9PN63 330 aa5.98□□□□□ -1.45
PTPN4-209ENST00000469511 CDK2AP1O14519 115 aa5.98□□□□□ -1.45
PTPN4-209ENST00000469511 IFIT3O14879 490 aaKnown RBP5.98□□□□□ -1.45
PTPN4-209ENST00000469511 TM4SF5O14894 197 aa5.98□□□□□ -1.45
PTPN4-209ENST00000469511 ZNF862O60290 1169 aa5.98□□□□□ -1.45
PTPN4-209ENST00000469511 EFEMP2O95967 443 aa5.98□□□□□ -1.45
PTPN4-209ENST00000469511 CYP21A2P08686 494 aa5.98□□□□□ -1.45
PTPN4-209ENST00000469511 FAM86B2P0C5J1 330 aa5.98□□□□□ -1.45
PTPN4-209ENST00000469511 DARSP14868 501 aaKnown RBP5.98□□□□□ -1.45
PTPN4-209ENST00000469511 RPL17P18621 184 aaKnown RBP5.98□□□□□ -1.45
PTPN4-209ENST00000469511 SPINK2P20155 84 aa5.98□□□□□ -1.45
PTPN4-209ENST00000469511 PHKA2P46019 1235 aa5.98□□□□□ -1.45
PTPN4-209ENST00000469511 GPC3P51654 580 aa5.98□□□□□ -1.45
PTPN4-209ENST00000469511 AK2P54819 239 aa5.98□□□□□ -1.45
PTPN4-209ENST00000469511 PTH1RQ03431 593 aa5.98□□□□□ -1.45
PTPN4-209ENST00000469511 MTAPQ13126 283 aa5.98□□□□□ -1.45
PTPN4-209ENST00000469511 ACAP1Q15027 740 aa5.98□□□□□ -1.45
PTPN4-209ENST00000469511 MLF2Q15773 248 aaPredicted RBP5.98□□□□□ -1.45
PTPN4-209ENST00000469511 CCDC6Q16204 474 aa5.98□□□□□ -1.45
PTPN4-209ENST00000469511 IMMTQ16891 758 aaKnown RBP5.98□□□□□ -1.45
PTPN4-209ENST00000469511 ZNF528Q3MIS6 628 aa5.98□□□□□ -1.45
PTPN4-209ENST00000469511 NOMO2Q5JPE7 1267 aa5.98□□□□□ -1.45
PTPN4-209ENST00000469511 CMASQ8NFW8 434 aaPredicted RBP5.98□□□□□ -1.45
PTPN4-209ENST00000469511 ITFG1Q8TB96 612 aa5.98□□□□□ -1.45
PTPN4-209ENST00000469511 IGDCC4Q8TDY8 1250 aa5.98□□□□□ -1.45
PTPN4-209ENST00000469511 RABGGTAQ92696 567 aa5.98□□□□□ -1.45
PTPN4-209ENST00000469511 CDHR1Q96JP9 859 aa5.98□□□□□ -1.45
PTPN4-209ENST00000469511 KXD1Q9BQD3 176 aa5.98□□□□□ -1.45
PTPN4-209ENST00000469511 SDF4Q9BRK5 362 aa5.98□□□□□ -1.45
PTPN4-209ENST00000469511 DSCC1Q9BVC3 393 aa5.98□□□□□ -1.45
PTPN4-209ENST00000469511 SPZ1Q9BXG8 430 aa5.98□□□□□ -1.45
PTPN4-209ENST00000469511 LNPKQ9C0E8 428 aa5.98□□□□□ -1.45
PTPN4-209ENST00000469511 NT5C3AQ9H0P0 336 aa5.98□□□□□ -1.45
PTPN4-209ENST00000469511 CHMP4BQ9H444 224 aaKnown RBP5.98□□□□□ -1.45
PTPN4-209ENST00000469511 MIOSQ9NXC5 875 aa5.98□□□□□ -1.45
PTPN4-209ENST00000469511 AKT3Q9Y243 479 aa5.98□□□□□ -1.45
PTPN4-209ENST00000469511 PCDHGA2Q9Y5H1 932 aa5.98□□□□□ -1.45
PTPN4-209ENST00000469511 A0A087WZ62 844 aa5.97□□□□□ -1.45
PTPN4-209ENST00000469511 MEIS1O00470 390 aa5.97□□□□□ -1.45
PTPN4-209ENST00000469511 NRP1O14786 923 aa5.97□□□□□ -1.45
PTPN4-209ENST00000469511 MAFGO15525 162 aa5.97□□□□□ -1.45
PTPN4-209ENST00000469511 ZZEF1O43149 2961 aa5.97□□□□□ -1.45
PTPN4-209ENST00000469511 TGM5O43548 720 aa5.97□□□□□ -1.45
PTPN4-209ENST00000469511 EDIL3O43854 480 aa5.97□□□□□ -1.45
PTPN4-209ENST00000469511 GAS2O43903 313 aaKnown RBP5.97□□□□□ -1.45
PTPN4-209ENST00000469511 AVPP01185 164 aa5.97□□□□□ -1.45
PTPN4-209ENST00000469511 POMCP01189 267 aa5.97□□□□□ -1.45
PTPN4-209ENST00000469511 SDHBP21912 280 aa5.97□□□□□ -1.45
PTPN4-209ENST00000469511 GPC1P35052 558 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms