RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 NIPA1Q7RTP0 329 aa14.17□□□□□ -0.14
HDAC6-217ENST00000469223 CACNA2D4Q7Z3S7 1137 aa14.17□□□□□ -0.14
HDAC6-217ENST00000469223 SMAP1Q8IYB5 467 aaPredicted RBP14.17□□□□□ -0.14
HDAC6-217ENST00000469223 GAB3Q8WWW8 586 aa14.17□□□□□ -0.14
HDAC6-217ENST00000469223 NLRP4Q96MN2 994 aa14.17□□□□□ -0.14
HDAC6-217ENST00000469223 VPS45Q9NRW7 570 aa14.17□□□□□ -0.14
HDAC6-217ENST00000469223 DIAPH3Q9NSV4 1193 aa14.17□□□□□ -0.14
HDAC6-217ENST00000469223 ANKFY1Q9P2R3 1169 aa14.17□□□□□ -0.14
HDAC6-217ENST00000469223 DNMT3BQ9UBC3 853 aaKnown RBP14.17□□□□□ -0.14
HDAC6-217ENST00000469223 KLK13Q9UKR3 277 aa14.17□□□□□ -0.14
HDAC6-217ENST00000469223 NEUROG3Q9Y4Z2 214 aa14.17□□□□□ -0.14
HDAC6-217ENST00000469223 SAMM50Q9Y512 469 aa14.17□□□□□ -0.14
HDAC6-217ENST00000469223 PCDHA10Q9Y5I2 948 aa14.17□□□□□ -0.14
HDAC6-217ENST00000469223 IGLV3-22A0A075B6J6 115 aa14.16□□□□□ -0.14
HDAC6-217ENST00000469223 ARL5CA6NH57 179 aa14.16□□□□□ -0.14
HDAC6-217ENST00000469223 RPP40O75818 363 aaKnown RBP14.16□□□□□ -0.14
HDAC6-217ENST00000469223 DDAH1O94760 285 aa14.16□□□□□ -0.14
HDAC6-217ENST00000469223 CCNE1P24864 410 aa14.16□□□□□ -0.14
HDAC6-217ENST00000469223 LRRC32Q14392 662 aa14.16□□□□□ -0.14
HDAC6-217ENST00000469223 COL28A1Q2UY09 1125 aa14.16□□□□□ -0.14
HDAC6-217ENST00000469223 UBXN11Q5T124 520 aa14.16□□□□□ -0.14
HDAC6-217ENST00000469223 ZNF410Q86VK4 478 aa14.16□□□□□ -0.14
HDAC6-217ENST00000469223 RHPN2Q8IUC4 686 aa14.16□□□□□ -0.14
HDAC6-217ENST00000469223 KSR1Q8IVT5 923 aa14.16□□□□□ -0.14
HDAC6-217ENST00000469223 GPR65Q8IYL9 337 aa14.16□□□□□ -0.14
HDAC6-217ENST00000469223 ADAM32Q8TC27 787 aa14.16□□□□□ -0.14
HDAC6-217ENST00000469223 RABGGTAQ92696 567 aa14.16□□□□□ -0.14
HDAC6-217ENST00000469223 IRF7Q92985 503 aa14.16□□□□□ -0.14
HDAC6-217ENST00000469223 ZFP42Q96MM3 310 aa14.16□□□□□ -0.14
HDAC6-217ENST00000469223 GAD1Q99259 594 aa14.16□□□□□ -0.14
HDAC6-217ENST00000469223 LZTS2Q9BRK4 669 aa14.16□□□□□ -0.14
HDAC6-217ENST00000469223 ZNF577Q9BSK1 485 aa14.16□□□□□ -0.14
HDAC6-217ENST00000469223 INO80BQ9C086 356 aaPredicted RBP14.16□□□□□ -0.14
HDAC6-217ENST00000469223 GDE1Q9NZC3 331 aa14.16□□□□□ -0.14
HDAC6-217ENST00000469223 ADAM28Q9UKQ2 775 aa14.16□□□□□ -0.14
HDAC6-217ENST00000469223 PCDHGA5Q9Y5G8 931 aa14.16□□□□□ -0.14
HDAC6-217ENST00000469223 ARID2Q68CP9 1835 aa14.15□□□□□ -0.14
HDAC6-217ENST00000469223 THADAQ6YHU6 1953 aa14.15□□□□□ -0.14
HDAC6-217ENST00000469223 EIF4E1BA6NMX2 242 aaKnown RBP14.15□□□□□ -0.14
HDAC6-217ENST00000469223 NRG2O14511 850 aaPredicted RBP14.15□□□□□ -0.14
HDAC6-217ENST00000469223 ADAM12O43184 909 aa14.15□□□□□ -0.14
HDAC6-217ENST00000469223 NR1I2O75469 434 aa14.15□□□□□ -0.14
HDAC6-217ENST00000469223 POU2F2P09086 479 aa14.15□□□□□ -0.14
HDAC6-217ENST00000469223 CCDC192P0DO97 292 aa14.15□□□□□ -0.14
HDAC6-217ENST00000469223 RXRAP19793 462 aa14.15□□□□□ -0.14
HDAC6-217ENST00000469223 SMARCA1P28370 1054 aa14.15□□□□□ -0.14
HDAC6-217ENST00000469223 GDI1P31150 447 aa14.15□□□□□ -0.14
HDAC6-217ENST00000469223 PXNP49023 591 aaPredicted RBP14.15□□□□□ -0.14
HDAC6-217ENST00000469223 PSMD5Q16401 504 aa14.15□□□□□ -0.14
HDAC6-217ENST00000469223 MTERF2Q49AM1 385 aa14.15□□□□□ -0.14
HDAC6-217ENST00000469223 WDR44Q5JSH3 913 aa14.15□□□□□ -0.14
HDAC6-217ENST00000469223 DAB2IPQ5VWQ8 1189 aa14.15□□□□□ -0.14
HDAC6-217ENST00000469223 RALYLQ86SE5 291 aaKnown RBP14.15□□□□□ -0.14
HDAC6-217ENST00000469223 PROSER1Q86XN7 944 aa14.15□□□□□ -0.14
HDAC6-217ENST00000469223 MAP3K14Q99558 947 aa14.15□□□□□ -0.14
HDAC6-217ENST00000469223 CLSTN3Q9BQT9 956 aa14.15□□□□□ -0.14
HDAC6-217ENST00000469223 TRMT61BQ9BVS5 477 aaKnown RBP14.15□□□□□ -0.14
HDAC6-217ENST00000469223 COLEC11Q9BWP8 271 aa14.15□□□□□ -0.14
HDAC6-217ENST00000469223 ZNF334Q9HCZ1 680 aaPredicted RBP14.15□□□□□ -0.14
HDAC6-217ENST00000469223 NRBP2Q9NSY0 501 aa14.15□□□□□ -0.14
HDAC6-217ENST00000469223 CACNG4Q9UBN1 327 aa14.15□□□□□ -0.14
HDAC6-217ENST00000469223 ABCA7Q8IZY2 2146 aa14.14□□□□□ -0.15
HDAC6-217ENST00000469223 PTPN13Q12923 2485 aa14.14□□□□□ -0.15
HDAC6-217ENST00000469223 TMEM150BA6NC51 233 aa14.14□□□□□ -0.15
HDAC6-217ENST00000469223 WDR64B1ANS9 1081 aa14.14□□□□□ -0.15
HDAC6-217ENST00000469223 FOSP01100 380 aaPredicted RBP14.14□□□□□ -0.15
HDAC6-217ENST00000469223 ITGA4P13612 1032 aa14.14□□□□□ -0.15
HDAC6-217ENST00000469223 CEACAM1P13688 526 aa14.14□□□□□ -0.15
HDAC6-217ENST00000469223 ADCY7P51828 1080 aa14.14□□□□□ -0.15
HDAC6-217ENST00000469223 NAPAP54920 295 aa14.14□□□□□ -0.15
HDAC6-217ENST00000469223 ANTXR2P58335 489 aa14.14□□□□□ -0.15
HDAC6-217ENST00000469223 AXDND1Q5T1B0 1012 aaPredicted RBP14.14□□□□□ -0.15
HDAC6-217ENST00000469223 WWC2Q6AWC2 1192 aa14.14□□□□□ -0.15
HDAC6-217ENST00000469223 TYW1BQ6NUM6 668 aa14.14□□□□□ -0.15
HDAC6-217ENST00000469223 MAP4K3Q8IVH8 894 aa14.14□□□□□ -0.15
HDAC6-217ENST00000469223 CCDC82Q8N4S0 544 aa14.14□□□□□ -0.15
HDAC6-217ENST00000469223 SMG8Q8ND04 991 aaKnown RBP14.14□□□□□ -0.15
HDAC6-217ENST00000469223 SH2D3AQ9BRG2 576 aa14.14□□□□□ -0.15
HDAC6-217ENST00000469223 RIC8AQ9NPQ8 531 aa14.14□□□□□ -0.15
HDAC6-217ENST00000469223 TBC1D22BQ9NU19 505 aa14.14□□□□□ -0.15
HDAC6-217ENST00000469223 MIOSQ9NXC5 875 aa14.14□□□□□ -0.15
HDAC6-217ENST00000469223 SEPT9Q9UHD8 586 aaPredicted RBP14.14□□□□□ -0.15
HDAC6-217ENST00000469223 MSRB2Q9Y3D2 182 aa14.14□□□□□ -0.15
HDAC6-217ENST00000469223 TAF6LQ9Y6J9 622 aa14.14□□□□□ -0.15
HDAC6-217ENST00000469223 SF3B1O75533 1304 aaKnown RBP eCLIP14.14□□□□□ -0.151e-6■■■■■ 66.8
HDAC6-217ENST00000469223 LNP1A1A4G5 178 aa14.13□□□□□ -0.15
HDAC6-217ENST00000469223 SEC24BO95487 1268 aa14.13□□□□□ -0.15
HDAC6-217ENST00000469223 RHOP08100 348 aa14.13□□□□□ -0.15
HDAC6-217ENST00000469223 PI4KAP42356 2102 aa14.13□□□□□ -0.15
HDAC6-217ENST00000469223 SOX9P48436 509 aa14.13□□□□□ -0.15
HDAC6-217ENST00000469223 GNAQP50148 359 aa14.13□□□□□ -0.15
HDAC6-217ENST00000469223 CDC42EP1Q00587 391 aa14.13□□□□□ -0.15
HDAC6-217ENST00000469223 TARBP2Q15633 366 aaKnown RBP14.13□□□□□ -0.15
HDAC6-217ENST00000469223 FAM78AQ5JUQ0 283 aa14.13□□□□□ -0.15
HDAC6-217ENST00000469223 VITQ6UXI7 678 aa14.13□□□□□ -0.15
HDAC6-217ENST00000469223 RAB11FIP4Q86YS3 637 aa14.13□□□□□ -0.15
HDAC6-217ENST00000469223 DEFB124Q8NES8 71 aa14.13□□□□□ -0.15
HDAC6-217ENST00000469223 HASPINQ8TF76 798 aa14.13□□□□□ -0.15
HDAC6-217ENST00000469223 IL25Q9H293 177 aa14.13□□□□□ -0.15
HDAC6-217ENST00000469223 RNF39Q9H2S5 420 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms