RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 SMC2O95347 1197 aa9.35□□□□□ -0.91
SSBP1-208ENST00000469123 LDHAP00338 332 aaKnown RBP9.35□□□□□ -0.91
SSBP1-208ENST00000469123 THP07101 528 aa9.35□□□□□ -0.91
SSBP1-208ENST00000469123 CLTAP09496 248 aa9.35□□□□□ -0.91
SSBP1-208ENST00000469123 GARTP22102 1010 aa9.35□□□□□ -0.91
SSBP1-208ENST00000469123 NMT1P30419 496 aaKnown RBP9.35□□□□□ -0.91
SSBP1-208ENST00000469123 MATR3P43243 847 aaKnown RBP eCLIP9.35□□□□□ -0.91
SSBP1-208ENST00000469123 AFMP43652 599 aa9.35□□□□□ -0.91
SSBP1-208ENST00000469123 PLCB3Q01970 1234 aa9.35□□□□□ -0.91
SSBP1-208ENST00000469123 GPM6BQ13491 265 aa9.35□□□□□ -0.91
SSBP1-208ENST00000469123 KCNB1Q14721 858 aa9.35□□□□□ -0.91
SSBP1-208ENST00000469123 KCNT2Q6UVM3 1135 aa9.35□□□□□ -0.91
SSBP1-208ENST00000469123 Q7L0L9 218 aa9.35□□□□□ -0.91
SSBP1-208ENST00000469123 THNSL1Q8IYQ7 743 aa9.35□□□□□ -0.91
SSBP1-208ENST00000469123 SYCP3Q8IZU3 236 aa9.35□□□□□ -0.91
SSBP1-208ENST00000469123 COLGALT1Q8NBJ5 622 aa9.35□□□□□ -0.91
SSBP1-208ENST00000469123 GOLGA5Q8TBA6 731 aa9.35□□□□□ -0.91
SSBP1-208ENST00000469123 LPPQ93052 612 aa9.35□□□□□ -0.91
SSBP1-208ENST00000469123 MRPL38Q96DV4 380 aaKnown RBP9.35□□□□□ -0.91
SSBP1-208ENST00000469123 UROC1Q96N76 676 aa9.35□□□□□ -0.91
SSBP1-208ENST00000469123 GUCD1Q96NT3 240 aa9.35□□□□□ -0.91
SSBP1-208ENST00000469123 C17orf80Q9BSJ5 609 aa9.35□□□□□ -0.91
SSBP1-208ENST00000469123 PRDM12Q9H4Q4 367 aa9.35□□□□□ -0.91
SSBP1-208ENST00000469123 RMND1Q9NWS8 449 aa9.35□□□□□ -0.91
SSBP1-208ENST00000469123 SPG21Q9NZD8 308 aa9.35□□□□□ -0.91
SSBP1-208ENST00000469123 INPP5FQ9Y2H2 1132 aa9.35□□□□□ -0.91
SSBP1-208ENST00000469123 HES2Q9Y543 173 aa9.35□□□□□ -0.91
SSBP1-208ENST00000469123 A0A0B4J269 797 aa9.34□□□□□ -0.91
SSBP1-208ENST00000469123 TTLL13PA6NNM8 815 aa9.34□□□□□ -0.91
SSBP1-208ENST00000469123 ZC3H11AO75152 810 aaKnown RBP eCLIP9.34□□□□□ -0.91
SSBP1-208ENST00000469123 RHOBTB3O94955 611 aa9.34□□□□□ -0.91
SSBP1-208ENST00000469123 ALDH2P05091 517 aa9.34□□□□□ -0.91
SSBP1-208ENST00000469123 MLH1P40692 756 aa9.34□□□□□ -0.91
SSBP1-208ENST00000469123 DSC1Q08554 894 aa9.34□□□□□ -0.91
SSBP1-208ENST00000469123 TUSC3Q13454 348 aa9.34□□□□□ -0.91
SSBP1-208ENST00000469123 CUL4BQ13620 913 aa9.34□□□□□ -0.91
SSBP1-208ENST00000469123 BMT2Q1RMZ1 405 aa9.34□□□□□ -0.91
SSBP1-208ENST00000469123 XKR4Q5GH76 650 aa9.34□□□□□ -0.91
SSBP1-208ENST00000469123 EEF1DP3Q658K8 133 aa9.34□□□□□ -0.91
SSBP1-208ENST00000469123 EPM2AIP1Q7L775 607 aaPredicted RBP9.34□□□□□ -0.91
SSBP1-208ENST00000469123 HS2ST1Q7LGA3 356 aa9.34□□□□□ -0.91
SSBP1-208ENST00000469123 ENGASEQ8NFI3 743 aa9.34□□□□□ -0.91
SSBP1-208ENST00000469123 ZNF507Q8TCN5 953 aa9.34□□□□□ -0.91
SSBP1-208ENST00000469123 POMGNT1Q8WZA1 660 aa9.34□□□□□ -0.91
SSBP1-208ENST00000469123 STAMQ92783 540 aa9.34□□□□□ -0.91
SSBP1-208ENST00000469123 DDX27Q96GQ7 796 aaKnown RBP9.34□□□□□ -0.91
SSBP1-208ENST00000469123 TMEM169Q96HH4 297 aa9.34□□□□□ -0.91
SSBP1-208ENST00000469123 CHAMP1Q96JM3 812 aa9.34□□□□□ -0.91
SSBP1-208ENST00000469123 FAM161BQ96MY7 647 aa9.34□□□□□ -0.91
SSBP1-208ENST00000469123 GSDMAQ96QA5 445 aa9.34□□□□□ -0.91
SSBP1-208ENST00000469123 GAD1Q99259 594 aa9.34□□□□□ -0.91
SSBP1-208ENST00000469123 MSTO1Q9BUK6 570 aa9.34□□□□□ -0.91
SSBP1-208ENST00000469123 APOL6Q9BWW8 343 aa9.34□□□□□ -0.91
SSBP1-208ENST00000469123 GBP3Q9H0R5 595 aa9.34□□□□□ -0.91
SSBP1-208ENST00000469123 GOLPH3LQ9H4A5 285 aa9.34□□□□□ -0.91
SSBP1-208ENST00000469123 KIAA1586Q9HCI6 787 aa9.34□□□□□ -0.91
SSBP1-208ENST00000469123 SNTG2Q9NY99 539 aa9.34□□□□□ -0.91
SSBP1-208ENST00000469123 CNTN3Q9P232 1028 aa9.34□□□□□ -0.91
SSBP1-208ENST00000469123 PLAGL2Q9UPG8 496 aa9.34□□□□□ -0.91
SSBP1-208ENST00000469123 COL4A4P53420 1690 aaPredicted RBP9.34□□□□□ -0.91
SSBP1-208ENST00000469123 BRWD1Q9NSI6 2320 aa9.34□□□□□ -0.91
SSBP1-208ENST00000469123 PDCD11Q14690 1871 aaKnown RBP9.34□□□□□ -0.91
SSBP1-208ENST00000469123 MEIS3P2A8K0S8 358 aa9.33□□□□□ -0.92
SSBP1-208ENST00000469123 FGF18O76093 207 aa9.33□□□□□ -0.92
SSBP1-208ENST00000469123 ARHGEF15O94989 841 aa9.33□□□□□ -0.92
SSBP1-208ENST00000469123 IL18RAPO95256 599 aa9.33□□□□□ -0.92
SSBP1-208ENST00000469123 RPN1P04843 607 aaKnown RBP9.33□□□□□ -0.92
SSBP1-208ENST00000469123 EDN1P05305 212 aa9.33□□□□□ -0.92
SSBP1-208ENST00000469123 GALTP07902 379 aa9.33□□□□□ -0.92
SSBP1-208ENST00000469123 MYBP10242 640 aa9.33□□□□□ -0.92
SSBP1-208ENST00000469123 KCNE1P15382 129 aa9.33□□□□□ -0.92
SSBP1-208ENST00000469123 PAX3P23760 479 aa9.33□□□□□ -0.92
SSBP1-208ENST00000469123 AKAP5P24588 427 aa9.33□□□□□ -0.92
SSBP1-208ENST00000469123 PPP1R2P41236 205 aa9.33□□□□□ -0.92
SSBP1-208ENST00000469123 GATMP50440 423 aa9.33□□□□□ -0.92
SSBP1-208ENST00000469123 SCNN1GP51170 649 aa9.33□□□□□ -0.92
SSBP1-208ENST00000469123 BCAR1P56945 870 aa9.33□□□□□ -0.92
SSBP1-208ENST00000469123 PPP2R3AQ06190 1150 aa9.33□□□□□ -0.92
SSBP1-208ENST00000469123 DPYDQ12882 1025 aa9.33□□□□□ -0.92
SSBP1-208ENST00000469123 ELAVL2Q12926 359 aaKnown RBP9.33□□□□□ -0.92
SSBP1-208ENST00000469123 SNW1Q13573 536 aaKnown RBP9.33□□□□□ -0.92
SSBP1-208ENST00000469123 KMT5BQ4FZB7 885 aa9.33□□□□□ -0.92
SSBP1-208ENST00000469123 ZC2HC1CQ53FD0 456 aaPredicted RBP9.33□□□□□ -0.92
SSBP1-208ENST00000469123 ARMCX5Q6P1M9 558 aa9.33□□□□□ -0.92
SSBP1-208ENST00000469123 ALKAL1Q6UXT8 129 aa9.33□□□□□ -0.92
SSBP1-208ENST00000469123 LRRC55Q6ZSA7 311 aa9.33□□□□□ -0.92
SSBP1-208ENST00000469123 ZBTB33Q86T24 672 aa9.33□□□□□ -0.92
SSBP1-208ENST00000469123 CDR2LQ86X02 465 aaPredicted RBP9.33□□□□□ -0.92
SSBP1-208ENST00000469123 NT5DC4Q86YG4 428 aa9.33□□□□□ -0.92
SSBP1-208ENST00000469123 COLGALT2Q8IYK4 626 aa9.33□□□□□ -0.92
SSBP1-208ENST00000469123 GPR65Q8IYL9 337 aa9.33□□□□□ -0.92
SSBP1-208ENST00000469123 SLC39A11Q8N1S5 342 aa9.33□□□□□ -0.92
SSBP1-208ENST00000469123 KLHL23Q8NBE8 558 aa9.33□□□□□ -0.92
SSBP1-208ENST00000469123 GSTCDQ8NEC7 633 aa9.33□□□□□ -0.92
SSBP1-208ENST00000469123 GDPD5Q8WTR4 605 aa9.33□□□□□ -0.92
SSBP1-208ENST00000469123 TMEM174Q8WUU8 243 aa9.33□□□□□ -0.92
SSBP1-208ENST00000469123 SNX27Q96L92 541 aa9.33□□□□□ -0.92
SSBP1-208ENST00000469123 CDCA3Q99618 268 aaPredicted RBP9.33□□□□□ -0.92
SSBP1-208ENST00000469123 COLEC11Q9BWP8 271 aa9.33□□□□□ -0.92
SSBP1-208ENST00000469123 BLZF1Q9H2G9 400 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms