RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 LMBRD2Q68DH5 695 aaPredicted RBP22.31■■□□□ 1.16
TMEM53-207ENST00000468117 FNBP1Q96RU3 617 aa22.31■■□□□ 1.16
TMEM53-207ENST00000468117 A0A0U1RQJ8 604 aa22.31■■□□□ 1.16
TMEM53-207ENST00000468117 KPNA6O60684 536 aa22.31■■□□□ 1.16
TMEM53-207ENST00000468117 ADAMTS4O75173 837 aa22.31■■□□□ 1.16
TMEM53-207ENST00000468117 OFD1O75665 1012 aa22.31■■□□□ 1.16
TMEM53-207ENST00000468117 MYCNP04198 464 aaPredicted RBP22.31■■□□□ 1.16
TMEM53-207ENST00000468117 ENPEPQ07075 957 aa22.31■■□□□ 1.16
TMEM53-207ENST00000468117 HGSNATQ68CP4 663 aa22.31■■□□□ 1.16
TMEM53-207ENST00000468117 PHLDB3Q6NSJ2 640 aa22.31■■□□□ 1.16
TMEM53-207ENST00000468117 SV2AQ7L0J3 742 aa22.31■■□□□ 1.16
TMEM53-207ENST00000468117 ZNF410Q86VK4 478 aa22.31■■□□□ 1.16
TMEM53-207ENST00000468117 DNAJB3Q8WWF6 145 aa22.31■■□□□ 1.16
TMEM53-207ENST00000468117 ATRIPQ8WXE1 791 aa22.31■■□□□ 1.16
TMEM53-207ENST00000468117 ZNF516Q92618 1163 aa22.31■■□□□ 1.16
TMEM53-207ENST00000468117 CCDC42Q96M95 316 aa22.31■■□□□ 1.16
TMEM53-207ENST00000468117 MTG1Q9BT17 334 aaPredicted RBP22.31■■□□□ 1.16
TMEM53-207ENST00000468117 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.31■■□□□ 1.16
TMEM53-207ENST00000468117 TNFSF13BQ9Y275 285 aa22.31■■□□□ 1.16
TMEM53-207ENST00000468117 PTPRJQ12913 1337 aa22.3■■□□□ 1.16
TMEM53-207ENST00000468117 C17orf102A2RUQ5 167 aa22.3■■□□□ 1.16
TMEM53-207ENST00000468117 OGTO15294 1046 aa22.3■■□□□ 1.16
TMEM53-207ENST00000468117 TNNT1P13805 278 aa22.3■■□□□ 1.16
TMEM53-207ENST00000468117 TNNI1P19237 187 aa22.3■■□□□ 1.16
TMEM53-207ENST00000468117 GTF2H1P32780 548 aa22.3■■□□□ 1.16
TMEM53-207ENST00000468117 JAM2P57087 298 aa22.3■■□□□ 1.16
TMEM53-207ENST00000468117 CLDN10P78369 228 aa22.3■■□□□ 1.16
TMEM53-207ENST00000468117 CCDC170Q8IYT3 715 aa22.3■■□□□ 1.16
TMEM53-207ENST00000468117 ZNF296Q8WUU4 475 aaPredicted RBP22.3■■□□□ 1.16
TMEM53-207ENST00000468117 SEMA4DQ92854 862 aa22.3■■□□□ 1.16
TMEM53-207ENST00000468117 ADAMTS10Q9H324 1103 aa22.3■■□□□ 1.16
TMEM53-207ENST00000468117 AIPL1Q9NZN9 384 aa22.3■■□□□ 1.16
TMEM53-207ENST00000468117 DNAJC12Q9UKB3 198 aa22.3■■□□□ 1.16
TMEM53-207ENST00000468117 CNTNAP2Q9UHC6 1331 aa22.3■■□□□ 1.16
TMEM53-207ENST00000468117 CYLC1P35663 651 aaPredicted RBP22.3■■□□□ 1.16
TMEM53-207ENST00000468117 EIF4A3P38919 411 aaKnown RBP22.3■■□□□ 1.16
TMEM53-207ENST00000468117 HSP90AA2PQ14568 343 aaPredicted RBP22.3■■□□□ 1.16
TMEM53-207ENST00000468117 ENOX2Q16206 610 aaKnown RBP22.3■■□□□ 1.16
TMEM53-207ENST00000468117 THNSL1Q8IYQ7 743 aa22.3■■□□□ 1.16
TMEM53-207ENST00000468117 TAS1R2Q8TE23 839 aa22.3■■□□□ 1.16
TMEM53-207ENST00000468117 ERO1AQ96HE7 468 aa22.3■■□□□ 1.16
TMEM53-207ENST00000468117 CPB2Q96IY4 423 aa22.3■■□□□ 1.16
TMEM53-207ENST00000468117 PRIMPOLQ96LW4 560 aa22.3■■□□□ 1.16
TMEM53-207ENST00000468117 CDHR5Q9HBB8 845 aa22.3■■□□□ 1.16
TMEM53-207ENST00000468117 REXO2Q9Y3B8 237 aaKnown RBP22.3■■□□□ 1.16
TMEM53-207ENST00000468117 GPR32O75388 356 aa22.29■■□□□ 1.16
TMEM53-207ENST00000468117 PNMA6AP0CW24 399 aaPredicted RBP22.29■■□□□ 1.16
TMEM53-207ENST00000468117 ARF4P18085 180 aaPredicted RBP22.29■■□□□ 1.16
TMEM53-207ENST00000468117 SLC9C1Q4G0N8 1177 aa22.29■■□□□ 1.16
TMEM53-207ENST00000468117 TDRD12Q587J7 1177 aaKnown RBP22.29■■□□□ 1.16
TMEM53-207ENST00000468117 MAP3K21Q5TCX8 1036 aa22.29■■□□□ 1.16
TMEM53-207ENST00000468117 CEP120Q8N960 986 aa22.29■■□□□ 1.16
TMEM53-207ENST00000468117 CDT1Q9H211 546 aa22.29■■□□□ 1.16
TMEM53-207ENST00000468117 COQ4Q9Y3A0 265 aa22.29■■□□□ 1.16
TMEM53-207ENST00000468117 FKTNO75072 461 aa22.28■■□□□ 1.16
TMEM53-207ENST00000468117 GNRH1P01148 92 aa22.28■■□□□ 1.16
TMEM53-207ENST00000468117 SERPING1P05155 500 aa22.28■■□□□ 1.16
TMEM53-207ENST00000468117 FGFR4P22455 802 aa22.28■■□□□ 1.16
TMEM53-207ENST00000468117 HOXC8P31273 242 aa22.28■■□□□ 1.16
TMEM53-207ENST00000468117 OSTNP61366 133 aa22.28■■□□□ 1.16
TMEM53-207ENST00000468117 NKX3-2P78367 333 aa22.28■■□□□ 1.16
TMEM53-207ENST00000468117 ASIC2Q16515 512 aa22.28■■□□□ 1.16
TMEM53-207ENST00000468117 SRGAP1Q7Z6B7 1085 aa22.28■■□□□ 1.16
TMEM53-207ENST00000468117 ARHGEF19Q8IW93 802 aa22.28■■□□□ 1.16
TMEM53-207ENST00000468117 BRSK2Q8IWQ3 736 aa22.28■■□□□ 1.16
TMEM53-207ENST00000468117 FBXL13Q8NEE6 735 aa22.28■■□□□ 1.16
TMEM53-207ENST00000468117 DEF6Q9H4E7 631 aa22.28■■□□□ 1.16
TMEM53-207ENST00000468117 CPSF3Q9UKF6 684 aaKnown RBP22.28■■□□□ 1.16
TMEM53-207ENST00000468117 MYO6Q9UM54 1294 aa22.28■■□□□ 1.16
TMEM53-207ENST00000468117 ERLIN2O94905 339 aa22.28■■□□□ 1.16
TMEM53-207ENST00000468117 NBPF20Q3BBV1 942 aa22.28■■□□□ 1.16
TMEM53-207ENST00000468117 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.28■■□□□ 1.16
TMEM53-207ENST00000468117 C15orf39Q6ZRI6 1047 aa22.28■■□□□ 1.16
TMEM53-207ENST00000468117 IRF2BP2Q7Z5L9 587 aa22.28■■□□□ 1.16
TMEM53-207ENST00000468117 OSMRQ99650 979 aa22.28■■□□□ 1.16
TMEM53-207ENST00000468117 STK33Q9BYT3 514 aa22.28■■□□□ 1.16
TMEM53-207ENST00000468117 PDZD7Q9H5P4 517 aa22.28■■□□□ 1.16
TMEM53-207ENST00000468117 UBE2TQ9NPD8 197 aaPredicted RBP22.28■■□□□ 1.16
TMEM53-207ENST00000468117 LZTFL1Q9NQ48 299 aa22.28■■□□□ 1.16
TMEM53-207ENST00000468117 EIF3CLB5ME19 914 aaKnown RBP22.27■■□□□ 1.16
TMEM53-207ENST00000468117 TSPAN1O60635 241 aa22.27■■□□□ 1.16
TMEM53-207ENST00000468117 GNAT1P11488 350 aa22.27■■□□□ 1.16
TMEM53-207ENST00000468117 KIF11P52732 1056 aa22.27■■□□□ 1.16
TMEM53-207ENST00000468117 CYP27A1Q02318 531 aa22.27■■□□□ 1.16
TMEM53-207ENST00000468117 DRAP1Q14919 205 aaPredicted RBP22.27■■□□□ 1.16
TMEM53-207ENST00000468117 ARHGAP44Q17R89 818 aa22.27■■□□□ 1.16
TMEM53-207ENST00000468117 PXYLP1Q8TE99 480 aa22.27■■□□□ 1.16
TMEM53-207ENST00000468117 EIF3CQ99613 913 aaKnown RBP22.27■■□□□ 1.16
TMEM53-207ENST00000468117 RAB20Q9NX57 234 aa22.27■■□□□ 1.16
TMEM53-207ENST00000468117 GOLGA6L9A6NEM1 432 aa22.26■■□□□ 1.15
TMEM53-207ENST00000468117 F8VZ95 297 aa22.26■■□□□ 1.15
TMEM53-207ENST00000468117 ASGR1P07306 291 aa22.26■■□□□ 1.15
TMEM53-207ENST00000468117 CDC42EP1Q00587 391 aa22.26■■□□□ 1.15
TMEM53-207ENST00000468117 KLHL30Q0D2K2 578 aa22.26■■□□□ 1.15
TMEM53-207ENST00000468117 KCNA10Q16322 511 aa22.26■■□□□ 1.15
TMEM53-207ENST00000468117 ELMO3Q96BJ8 720 aa22.26■■□□□ 1.15
TMEM53-207ENST00000468117 FAM212AQ96EL1 285 aa22.26■■□□□ 1.15
TMEM53-207ENST00000468117 CGRRF1Q99675 332 aa22.26■■□□□ 1.15
TMEM53-207ENST00000468117 GCOM2Q9BZD3 368 aaPredicted RBP22.26■■□□□ 1.15
TMEM53-207ENST00000468117 GPR88Q9GZN0 384 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms