RNA–Protein interactions for RNA: ENST00000467563.3

CHRNA4-203, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,098 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-203ENST00000467563 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.34■□□□□ 0.85
CHRNA4-203ENST00000467563 DAAM1Q9Y4D1 1078 aa20.34■□□□□ 0.85
CHRNA4-203ENST00000467563 RBAK-RBAKDNI3L0D1 243 aa20.34■□□□□ 0.85
CHRNA4-203ENST00000467563 GFPT2O94808 682 aa20.34■□□□□ 0.85
CHRNA4-203ENST00000467563 AKR1A1P14550 325 aa20.34■□□□□ 0.85
CHRNA4-203ENST00000467563 RFX1P22670 979 aa20.34■□□□□ 0.85
CHRNA4-203ENST00000467563 SOX5P35711 763 aa20.34■□□□□ 0.85
CHRNA4-203ENST00000467563 TNFSF9P41273 254 aa20.34■□□□□ 0.85
CHRNA4-203ENST00000467563 TERF1P54274 439 aa20.34■□□□□ 0.85
CHRNA4-203ENST00000467563 PRPF4BQ13523 1007 aaKnown RBP20.34■□□□□ 0.85
CHRNA4-203ENST00000467563 MFSD10Q14728 455 aa20.34■□□□□ 0.85
CHRNA4-203ENST00000467563 ARHGAP44Q17R89 818 aa20.34■□□□□ 0.85
CHRNA4-203ENST00000467563 CCDC122Q5T0U0 273 aa20.34■□□□□ 0.85
CHRNA4-203ENST00000467563 C15orf39Q6ZRI6 1047 aa20.34■□□□□ 0.85
CHRNA4-203ENST00000467563 IFNLR1Q8IU57 520 aaPredicted RBP20.34■□□□□ 0.85
CHRNA4-203ENST00000467563 FBXL13Q8NEE6 735 aa20.34■□□□□ 0.85
CHRNA4-203ENST00000467563 JAKMIP2Q96AA8 810 aa20.34■□□□□ 0.85
CHRNA4-203ENST00000467563 FNBP1Q96RU3 617 aa20.34■□□□□ 0.85
CHRNA4-203ENST00000467563 GUCA1BQ9UMX6 200 aa20.34■□□□□ 0.85
CHRNA4-203ENST00000467563 CNTNAP2Q9UHC6 1331 aa20.33■□□□□ 0.85
CHRNA4-203ENST00000467563 RRN3P2A6NIE6 340 aa20.33■□□□□ 0.85
CHRNA4-203ENST00000467563 EVI5O60447 810 aa20.33■□□□□ 0.85
CHRNA4-203ENST00000467563 CYBAP13498 195 aa20.33■□□□□ 0.85
CHRNA4-203ENST00000467563 GPC3P51654 580 aa20.33■□□□□ 0.85
CHRNA4-203ENST00000467563 ATF7IP2Q5U623 682 aa20.33■□□□□ 0.85
CHRNA4-203ENST00000467563 NFRKBQ6P4R8 1299 aa20.33■□□□□ 0.85
CHRNA4-203ENST00000467563 CDR2LQ86X02 465 aaPredicted RBP20.33■□□□□ 0.85
CHRNA4-203ENST00000467563 CREBZFQ9NS37 354 aa20.33■□□□□ 0.85
CHRNA4-203ENST00000467563 RAB20Q9NX57 234 aa20.33■□□□□ 0.85
CHRNA4-203ENST00000467563 ADAMTS1Q9UHI8 967 aa20.33■□□□□ 0.85
CHRNA4-203ENST00000467563 BZW2Q9Y6E2 419 aaKnown RBP20.33■□□□□ 0.85
CHRNA4-203ENST00000467563 DUSP10Q9Y6W6 482 aa20.33■□□□□ 0.85
CHRNA4-203ENST00000467563 NRCAMQ92823 1304 aa20.33■□□□□ 0.84
CHRNA4-203ENST00000467563 A0A087X0T9 212 aa20.33■□□□□ 0.84
CHRNA4-203ENST00000467563 MYL3P08590 195 aa20.33■□□□□ 0.84
CHRNA4-203ENST00000467563 FAM228BP0C875 321 aa20.33■□□□□ 0.84
CHRNA4-203ENST00000467563 TNNI1P19237 187 aa20.33■□□□□ 0.84
CHRNA4-203ENST00000467563 HIC1Q14526 733 aa20.33■□□□□ 0.84
CHRNA4-203ENST00000467563 SLC18A3Q16572 532 aa20.33■□□□□ 0.84
CHRNA4-203ENST00000467563 FSCN1Q16658 493 aaKnown RBP20.33■□□□□ 0.84
CHRNA4-203ENST00000467563 AMHR2Q16671 573 aa20.33■□□□□ 0.84
CHRNA4-203ENST00000467563 ZNF569Q5MCW4 686 aa20.33■□□□□ 0.84
CHRNA4-203ENST00000467563 EEF1DP3Q658K8 133 aa20.33■□□□□ 0.84
CHRNA4-203ENST00000467563 MPZL3Q6UWV2 235 aa20.33■□□□□ 0.84
CHRNA4-203ENST00000467563 MYRIPQ8NFW9 859 aa20.33■□□□□ 0.84
CHRNA4-203ENST00000467563 KAT5Q92993 513 aa20.33■□□□□ 0.84
CHRNA4-203ENST00000467563 MAP7D2Q96T17 732 aa20.33■□□□□ 0.84
CHRNA4-203ENST00000467563 HAS3O00219 553 aa20.32■□□□□ 0.84
CHRNA4-203ENST00000467563 FOXN3O00409 490 aaPredicted RBP20.32■□□□□ 0.84
CHRNA4-203ENST00000467563 OGTO15294 1046 aa20.32■□□□□ 0.84
CHRNA4-203ENST00000467563 FERP16591 822 aa20.32■□□□□ 0.84
CHRNA4-203ENST00000467563 PSEN2P49810 448 aa20.32■□□□□ 0.84
CHRNA4-203ENST00000467563 HSP90AA2PQ14568 343 aaPredicted RBP20.32■□□□□ 0.84
CHRNA4-203ENST00000467563 FAM187BQ17R55 369 aa20.32■□□□□ 0.84
CHRNA4-203ENST00000467563 ELMO3Q96BJ8 720 aa20.32■□□□□ 0.84
CHRNA4-203ENST00000467563 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.32■□□□□ 0.84
CHRNA4-203ENST00000467563 PRMT7Q9NVM4 692 aaPredicted RBP20.32■□□□□ 0.84
CHRNA4-203ENST00000467563 KAT6AQ92794 2004 aa20.32■□□□□ 0.84
CHRNA4-203ENST00000467563 MYADML2A6NDP7 307 aa20.31■□□□□ 0.84
CHRNA4-203ENST00000467563 C4BPAP04003 597 aaKnown RBP20.31■□□□□ 0.84
CHRNA4-203ENST00000467563 CASQ1P31415 396 aa20.31■□□□□ 0.84
CHRNA4-203ENST00000467563 MAGEA1P43355 309 aa20.31■□□□□ 0.84
CHRNA4-203ENST00000467563 TRIM32Q13049 653 aa20.31■□□□□ 0.84
CHRNA4-203ENST00000467563 ZACNQ401N2 412 aa20.31■□□□□ 0.84
CHRNA4-203ENST00000467563 MFSD14CQ5VZR4 134 aa20.31■□□□□ 0.84
CHRNA4-203ENST00000467563 BRSK2Q8IWQ3 736 aa20.31■□□□□ 0.84
CHRNA4-203ENST00000467563 NLRP7Q8WX94 980 aa20.31■□□□□ 0.84
CHRNA4-203ENST00000467563 TNFSF13BQ9Y275 285 aa20.31■□□□□ 0.84
CHRNA4-203ENST00000467563 MBLAC1A4D2B0 266 aaPredicted RBP20.31■□□□□ 0.84
CHRNA4-203ENST00000467563 KRT86O43790 486 aa20.31■□□□□ 0.84
CHRNA4-203ENST00000467563 DUSP11O75319 330 aaKnown RBP20.31■□□□□ 0.84
CHRNA4-203ENST00000467563 SP3Q02447 781 aa20.31■□□□□ 0.84
CHRNA4-203ENST00000467563 ZNF568Q3ZCX4 644 aa20.31■□□□□ 0.84
CHRNA4-203ENST00000467563 TDRD10Q5VZ19 366 aaKnown RBP20.31■□□□□ 0.84
CHRNA4-203ENST00000467563 SLC35F6Q8N357 371 aa20.31■□□□□ 0.84
CHRNA4-203ENST00000467563 KREMEN1Q96MU8 473 aa20.31■□□□□ 0.84
CHRNA4-203ENST00000467563 CPSF3Q9UKF6 684 aaKnown RBP20.31■□□□□ 0.84
CHRNA4-203ENST00000467563 KIF5AQ12840 1032 aa20.3■□□□□ 0.84
CHRNA4-203ENST00000467563 TMEM132AQ24JP5 1023 aa20.3■□□□□ 0.84
CHRNA4-203ENST00000467563 PPM1KQ8N3J5 372 aa20.3■□□□□ 0.84
CHRNA4-203ENST00000467563 OLIG1Q8TAK6 271 aa20.3■□□□□ 0.84
CHRNA4-203ENST00000467563 HELQQ8TDG4 1101 aa20.3■□□□□ 0.84
CHRNA4-203ENST00000467563 CGRRF1Q99675 332 aa20.3■□□□□ 0.84
CHRNA4-203ENST00000467563 PI4K2AQ9BTU6 479 aa20.3■□□□□ 0.84
CHRNA4-203ENST00000467563 FAM49AQ9H0Q0 323 aaPredicted RBP20.3■□□□□ 0.84
CHRNA4-203ENST00000467563 MYO1AQ9UBC5 1043 aa20.3■□□□□ 0.84
CHRNA4-203ENST00000467563 ZEB2O60315 1214 aa20.3■□□□□ 0.84
CHRNA4-203ENST00000467563 APLP1P51693 650 aa20.3■□□□□ 0.84
CHRNA4-203ENST00000467563 ADAM17P78536 824 aa20.3■□□□□ 0.84
CHRNA4-203ENST00000467563 PURAQ00577 322 aaKnown RBP20.3■□□□□ 0.84
CHRNA4-203ENST00000467563 REM2Q8IYK8 340 aaPredicted RBP20.3■□□□□ 0.84
CHRNA4-203ENST00000467563 CEP120Q8N960 986 aa20.3■□□□□ 0.84
CHRNA4-203ENST00000467563 OR5B17Q8NGF7 314 aa20.3■□□□□ 0.84
CHRNA4-203ENST00000467563 CDT1Q9H211 546 aa20.3■□□□□ 0.84
CHRNA4-203ENST00000467563 L2HGDHQ9H9P8 463 aa20.3■□□□□ 0.84
CHRNA4-203ENST00000467563 UQCRHLA0A096LP55 91 aa20.29■□□□□ 0.84
CHRNA4-203ENST00000467563 UQCRHP07919 91 aa20.29■□□□□ 0.84
CHRNA4-203ENST00000467563 C6orf222P0C671 652 aaPredicted RBP20.29■□□□□ 0.84
CHRNA4-203ENST00000467563 TMEM62Q0P6H9 643 aa20.29■□□□□ 0.84
CHRNA4-203ENST00000467563 KIZQ2M2Z5 673 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms