RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 ZCRB1Q8TBF4 217 aaKnown RBP5.04□□□□□ -1.6
VPS50-209ENST00000467326 ZNF483Q8TF39 744 aaPredicted RBP5.04□□□□□ -1.6
VPS50-209ENST00000467326 LANCL2Q9NS86 450 aa5.04□□□□□ -1.6
VPS50-209ENST00000467326 MKS1Q9NXB0 559 aa5.04□□□□□ -1.6
VPS50-209ENST00000467326 SORCS3Q9UPU3 1222 aa5.04□□□□□ -1.6
VPS50-209ENST00000467326 PCDHGA2Q9Y5H1 932 aa5.04□□□□□ -1.6
VPS50-209ENST00000467326 XDHP47989 1333 aa5.03□□□□□ -1.6
VPS50-209ENST00000467326 FAM171A2A8MVW0 826 aa5.03□□□□□ -1.6
VPS50-209ENST00000467326 PEX11BO96011 259 aa5.03□□□□□ -1.6
VPS50-209ENST00000467326 MYBL2P10244 700 aa5.03□□□□□ -1.6
VPS50-209ENST00000467326 MCM7P33993 719 aa5.03□□□□□ -1.6
VPS50-209ENST00000467326 SREBF1P36956 1147 aa5.03□□□□□ -1.6
VPS50-209ENST00000467326 PER3P56645 1201 aa5.03□□□□□ -1.6
VPS50-209ENST00000467326 SLC25A3Q00325 362 aa5.03□□□□□ -1.6
VPS50-209ENST00000467326 ANKS6Q68DC2 871 aa5.03□□□□□ -1.6
VPS50-209ENST00000467326 IGFL4Q6B9Z1 124 aa5.03□□□□□ -1.6
VPS50-209ENST00000467326 PGM2L1Q6PCE3 622 aa5.03□□□□□ -1.6
VPS50-209ENST00000467326 GPRIN1Q7Z2K8 1008 aa5.03□□□□□ -1.6
VPS50-209ENST00000467326 PQLC1Q8N2U9 271 aa5.03□□□□□ -1.6
VPS50-209ENST00000467326 RNF169Q8NCN4 708 aa5.03□□□□□ -1.6
VPS50-209ENST00000467326 C1orf162Q8NEQ5 155 aaPredicted RBP5.03□□□□□ -1.6
VPS50-209ENST00000467326 CPT1CQ8TCG5 803 aa5.03□□□□□ -1.6
VPS50-209ENST00000467326 TFAP2CQ92754 450 aa5.03□□□□□ -1.6
VPS50-209ENST00000467326 FAM193BQ96PV7 902 aaPredicted RBP5.03□□□□□ -1.6
VPS50-209ENST00000467326 SLC2A13Q96QE2 648 aa5.03□□□□□ -1.6
VPS50-209ENST00000467326 SENP6Q9GZR1 1112 aaPredicted RBP5.03□□□□□ -1.6
VPS50-209ENST00000467326 SPON1Q9HCB6 807 aa5.03□□□□□ -1.6
VPS50-209ENST00000467326 EIF2B4Q9UI10 523 aaKnown RBP5.03□□□□□ -1.6
VPS50-209ENST00000467326 DNM3Q9UQ16 869 aa5.03□□□□□ -1.6
VPS50-209ENST00000467326 REXO2Q9Y3B8 237 aaKnown RBP5.03□□□□□ -1.6
VPS50-209ENST00000467326 HS3ST3A1Q9Y663 406 aa5.03□□□□□ -1.6
VPS50-209ENST00000467326 XPOTO43592 962 aaKnown RBP5.02□□□□□ -1.61
VPS50-209ENST00000467326 NARSO43776 548 aaKnown RBP5.02□□□□□ -1.61
VPS50-209ENST00000467326 RECQL4O94761 1208 aa5.02□□□□□ -1.61
VPS50-209ENST00000467326 SCAF4O95104 1147 aaKnown RBP5.02□□□□□ -1.61
VPS50-209ENST00000467326 SNRPA1P09661 255 aaKnown RBP5.02□□□□□ -1.61
VPS50-209ENST00000467326 ALOX15P16050 662 aaPredicted RBP5.02□□□□□ -1.61
VPS50-209ENST00000467326 MGAT1P26572 445 aa5.02□□□□□ -1.61
VPS50-209ENST00000467326 APOBEC3AP31941 199 aaPredicted RBP5.02□□□□□ -1.61
VPS50-209ENST00000467326 PURAQ00577 322 aaKnown RBP5.02□□□□□ -1.61
VPS50-209ENST00000467326 SP140Q13342 867 aa5.02□□□□□ -1.61
VPS50-209ENST00000467326 ACAP2Q15057 778 aa5.02□□□□□ -1.61
VPS50-209ENST00000467326 FNDC7Q5VTL7 733 aa5.02□□□□□ -1.61
VPS50-209ENST00000467326 DRICH1Q6PGQ1 229 aaPredicted RBP5.02□□□□□ -1.61
VPS50-209ENST00000467326 FAM9AQ8IZU1 332 aaPredicted RBP5.02□□□□□ -1.61
VPS50-209ENST00000467326 ZNF276Q8N554 614 aa5.02□□□□□ -1.61
VPS50-209ENST00000467326 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.02□□□□□ -1.61
VPS50-209ENST00000467326 SLC25A43Q8WUT9 341 aaPredicted RBP5.02□□□□□ -1.61
VPS50-209ENST00000467326 NDC1Q9BTX1 674 aa5.02□□□□□ -1.61
VPS50-209ENST00000467326 CCDC8Q9H0W5 538 aaPredicted RBP5.02□□□□□ -1.61
VPS50-209ENST00000467326 KCNH6Q9H252 994 aa5.02□□□□□ -1.61
VPS50-209ENST00000467326 MOCS1Q9NZB8 636 aa5.02□□□□□ -1.61
VPS50-209ENST00000467326 SHTN1A0MZ66 631 aa5.01□□□□□ -1.61
VPS50-209ENST00000467326 ANKRD62A6NC57 917 aa5.01□□□□□ -1.61
VPS50-209ENST00000467326 TBKBP1A7MCY6 615 aa5.01□□□□□ -1.61
VPS50-209ENST00000467326 CXorf49A8MYA2 514 aaPredicted RBP5.01□□□□□ -1.61
VPS50-209ENST00000467326 GABRDO14764 452 aa5.01□□□□□ -1.61
VPS50-209ENST00000467326 PJA2O43164 708 aa5.01□□□□□ -1.61
VPS50-209ENST00000467326 ADH4P08319 380 aa5.01□□□□□ -1.61
VPS50-209ENST00000467326 RAP2AP10114 183 aa5.01□□□□□ -1.61
VPS50-209ENST00000467326 RBP3P10745 1247 aa5.01□□□□□ -1.61
VPS50-209ENST00000467326 GSPT1P15170 499 aaKnown RBP5.01□□□□□ -1.61
VPS50-209ENST00000467326 MAKP20794 623 aa5.01□□□□□ -1.61
VPS50-209ENST00000467326 GUCY1A2P33402 732 aa5.01□□□□□ -1.61
VPS50-209ENST00000467326 PTGS2P35354 604 aa5.01□□□□□ -1.61
VPS50-209ENST00000467326 CLRN1P58418 232 aa5.01□□□□□ -1.61
VPS50-209ENST00000467326 EVA1CP58658 441 aa5.01□□□□□ -1.61
VPS50-209ENST00000467326 SEPT2Q15019 361 aa5.01□□□□□ -1.61
VPS50-209ENST00000467326 BMT2Q1RMZ1 405 aa5.01□□□□□ -1.61
VPS50-209ENST00000467326 FAM47AQ5JRC9 791 aa5.01□□□□□ -1.61
VPS50-209ENST00000467326 AFMIDQ63HM1 303 aa5.01□□□□□ -1.61
VPS50-209ENST00000467326 EFCAB12Q6NXP0 572 aa5.01□□□□□ -1.61
VPS50-209ENST00000467326 ZFP28Q8NHY6 868 aa5.01□□□□□ -1.61
VPS50-209ENST00000467326 SLC35B2Q8TB61 432 aa5.01□□□□□ -1.61
VPS50-209ENST00000467326 SMAD5Q99717 465 aaKnown RBP5.01□□□□□ -1.61
VPS50-209ENST00000467326 PCED1AQ9H1Q7 454 aa5.01□□□□□ -1.61
VPS50-209ENST00000467326 LDAHQ9H6V9 325 aa5.01□□□□□ -1.61
VPS50-209ENST00000467326 MMRN2Q9H8L6 949 aa5.01□□□□□ -1.61
VPS50-209ENST00000467326 SLC2A4RGQ9NR83 387 aa5.01□□□□□ -1.61
VPS50-209ENST00000467326 TMEM140Q9NV12 185 aa5.01□□□□□ -1.61
VPS50-209ENST00000467326 SAP30BPQ9UHR5 308 aaKnown RBP5.01□□□□□ -1.61
VPS50-209ENST00000467326 AJAP1Q9UKB5 411 aaPredicted RBP5.01□□□□□ -1.61
VPS50-209ENST00000467326 MRFAP1Q9Y605 127 aa5.01□□□□□ -1.61
VPS50-209ENST00000467326 ATRNL1Q5VV63 1379 aa5.01□□□□□ -1.61
VPS50-209ENST00000467326 FZD9O00144 591 aa5□□□□□ -1.61
VPS50-209ENST00000467326 NDUFS2O75306 463 aa5□□□□□ -1.61
VPS50-209ENST00000467326 GPR32O75388 356 aa5□□□□□ -1.61
VPS50-209ENST00000467326 RPS6KA4O75676 772 aa5□□□□□ -1.61
VPS50-209ENST00000467326 IL2RBP14784 551 aa5□□□□□ -1.61
VPS50-209ENST00000467326 ALDH1A3P47895 512 aa5□□□□□ -1.61
VPS50-209ENST00000467326 SLC6A9P48067 706 aa5□□□□□ -1.61
VPS50-209ENST00000467326 SLC16A1P53985 500 aa5□□□□□ -1.61
VPS50-209ENST00000467326 RAP2BP61225 183 aa5□□□□□ -1.61
VPS50-209ENST00000467326 NHLH2Q02577 135 aa5□□□□□ -1.61
VPS50-209ENST00000467326 KLF10Q13118 480 aa5□□□□□ -1.61
VPS50-209ENST00000467326 CSRP2Q16527 193 aa5□□□□□ -1.61
VPS50-209ENST00000467326 PTPROQ16827 1216 aa5□□□□□ -1.61
VPS50-209ENST00000467326 RRP12Q5JTH9 1297 aaKnown RBP5□□□□□ -1.61
VPS50-209ENST00000467326 MIGA2Q7L4E1 593 aa5□□□□□ -1.61
VPS50-209ENST00000467326 SYT12Q8IV01 421 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms