RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 KCNN1Q92952 543 aa5.1□□□□□ -1.59
VPS13A-209ENST00000467124 LPPQ93052 612 aa5.1□□□□□ -1.59
VPS13A-209ENST00000467124 RIPOR3Q96MK2 946 aa5.1□□□□□ -1.59
VPS13A-209ENST00000467124 MYBBP1AQ9BQG0 1328 aaKnown RBP5.1□□□□□ -1.59
VPS13A-209ENST00000467124 C22orf23Q9BZE7 217 aa5.1□□□□□ -1.59
VPS13A-209ENST00000467124 SLAMF7Q9NQ25 335 aa5.1□□□□□ -1.59
VPS13A-209ENST00000467124 SPATA6Q9NWH7 488 aaPredicted RBP5.1□□□□□ -1.59
VPS13A-209ENST00000467124 NTMQ9P121 344 aa5.1□□□□□ -1.59
VPS13A-209ENST00000467124 NCDNQ9UBB6 729 aa5.1□□□□□ -1.59
VPS13A-209ENST00000467124 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.1□□□□□ -1.59
VPS13A-209ENST00000467124 CDC23Q9UJX2 597 aa5.1□□□□□ -1.59
VPS13A-209ENST00000467124 AJAP1Q9UKB5 411 aaPredicted RBP5.1□□□□□ -1.59
VPS13A-209ENST00000467124 SH3D21A4FU49 640 aa5.09□□□□□ -1.59
VPS13A-209ENST00000467124 C2orf78A6NCI8 922 aa5.09□□□□□ -1.59
VPS13A-209ENST00000467124 TCAF2A6NFQ2 919 aa5.09□□□□□ -1.59
VPS13A-209ENST00000467124 BTBD11A6QL63 1104 aa5.09□□□□□ -1.59
VPS13A-209ENST00000467124 DAPK3O43293 454 aa5.09□□□□□ -1.59
VPS13A-209ENST00000467124 NBNO60934 754 aa5.09□□□□□ -1.59
VPS13A-209ENST00000467124 TSPAN15O95858 294 aa5.09□□□□□ -1.59
VPS13A-209ENST00000467124 ZNF888P0CJ79 500 aaPredicted RBP5.09□□□□□ -1.59
VPS13A-209ENST00000467124 PCSK1P29120 753 aa5.09□□□□□ -1.59
VPS13A-209ENST00000467124 PTPN7P35236 360 aa5.09□□□□□ -1.59
VPS13A-209ENST00000467124 PHKA1P46020 1223 aa5.09□□□□□ -1.59
VPS13A-209ENST00000467124 MRE11P49959 708 aa5.09□□□□□ -1.59
VPS13A-209ENST00000467124 GJA9P57773 515 aa5.09□□□□□ -1.59
VPS13A-209ENST00000467124 CDC42EP1Q00587 391 aa5.09□□□□□ -1.59
VPS13A-209ENST00000467124 IFIT5Q13325 482 aaKnown RBP5.09□□□□□ -1.59
VPS13A-209ENST00000467124 TOP3AQ13472 1001 aaPredicted RBP5.09□□□□□ -1.59
VPS13A-209ENST00000467124 FGL2Q14314 439 aa5.09□□□□□ -1.59
VPS13A-209ENST00000467124 MST1LQ2TV78 715 aa5.09□□□□□ -1.59
VPS13A-209ENST00000467124 CNKSR3Q6P9H4 555 aa5.09□□□□□ -1.59
VPS13A-209ENST00000467124 MDM1Q8TC05 714 aa5.09□□□□□ -1.59
VPS13A-209ENST00000467124 ZNF480Q8WV37 535 aa5.09□□□□□ -1.59
VPS13A-209ENST00000467124 GFM2Q969S9 779 aaKnown RBP5.09□□□□□ -1.59
VPS13A-209ENST00000467124 KIAA1191Q96A73 305 aa5.09□□□□□ -1.59
VPS13A-209ENST00000467124 SAMD11Q96NU1 681 aa5.09□□□□□ -1.59
VPS13A-209ENST00000467124 SPATA25Q9BR10 227 aa5.09□□□□□ -1.59
VPS13A-209ENST00000467124 SENP6Q9GZR1 1112 aaPredicted RBP5.09□□□□□ -1.59
VPS13A-209ENST00000467124 PNPOQ9NVS9 261 aa5.09□□□□□ -1.59
VPS13A-209ENST00000467124 ACTL7AQ9Y615 435 aa5.09□□□□□ -1.59
VPS13A-209ENST00000467124 A0A088AWK7 358 aa5.08□□□□□ -1.6
VPS13A-209ENST00000467124 A0A1B0GTL3 188 aa5.08□□□□□ -1.6
VPS13A-209ENST00000467124 A0A1W2PPL8 197 aa5.08□□□□□ -1.6
VPS13A-209ENST00000467124 C9orf118A6NHY6 69 aa5.08□□□□□ -1.6
VPS13A-209ENST00000467124 ETV2O00321 342 aaPredicted RBP5.08□□□□□ -1.6
VPS13A-209ENST00000467124 ITGA10O75578 1167 aa5.08□□□□□ -1.6
VPS13A-209ENST00000467124 TCEA3O75764 348 aa5.08□□□□□ -1.6
VPS13A-209ENST00000467124 KLHL18O94889 574 aa5.08□□□□□ -1.6
VPS13A-209ENST00000467124 ENDOD1O94919 500 aa5.08□□□□□ -1.6
VPS13A-209ENST00000467124 AHSGP02765 367 aa5.08□□□□□ -1.6
VPS13A-209ENST00000467124 SETSIPP0DME0 302 aa5.08□□□□□ -1.6
VPS13A-209ENST00000467124 MYF5P13349 255 aa5.08□□□□□ -1.6
VPS13A-209ENST00000467124 DDCP20711 480 aa5.08□□□□□ -1.6
VPS13A-209ENST00000467124 MALP21145 153 aa5.08□□□□□ -1.6
VPS13A-209ENST00000467124 ABCB4P21439 1286 aa5.08□□□□□ -1.6
VPS13A-209ENST00000467124 SMARCA1P28370 1054 aa5.08□□□□□ -1.6
VPS13A-209ENST00000467124 SLC7A1P30825 629 aa5.08□□□□□ -1.6
VPS13A-209ENST00000467124 SREBF1P36956 1147 aa5.08□□□□□ -1.6
VPS13A-209ENST00000467124 MEOX1P50221 254 aa5.08□□□□□ -1.6
VPS13A-209ENST00000467124 NKX6-1P78426 367 aaPredicted RBP5.08□□□□□ -1.6
VPS13A-209ENST00000467124 ATP2C1P98194 919 aaPredicted RBP5.08□□□□□ -1.6
VPS13A-209ENST00000467124 MESP2Q0VG99 397 aa5.08□□□□□ -1.6
VPS13A-209ENST00000467124 ZNF827Q17R98 1081 aa5.08□□□□□ -1.6
VPS13A-209ENST00000467124 FAM26FQ5R3K3 315 aa5.08□□□□□ -1.6
VPS13A-209ENST00000467124 TAS1R1Q7RTX1 841 aa5.08□□□□□ -1.6
VPS13A-209ENST00000467124 CLEC14AQ86T13 490 aa5.08□□□□□ -1.6
VPS13A-209ENST00000467124 TMEM151BQ8IW70 566 aa5.08□□□□□ -1.6
VPS13A-209ENST00000467124 TMEFF1Q8IYR6 380 aa5.08□□□□□ -1.6
VPS13A-209ENST00000467124 LILRA3Q8N6C8 439 aaPredicted RBP5.08□□□□□ -1.6
VPS13A-209ENST00000467124 PCSK9Q8NBP7 692 aaKnown RBP5.08□□□□□ -1.6
VPS13A-209ENST00000467124 PLA2G15Q8NCC3 412 aa5.08□□□□□ -1.6
VPS13A-209ENST00000467124 OR14K1Q8NGZ2 314 aa5.08□□□□□ -1.6
VPS13A-209ENST00000467124 IFI44Q8TCB0 444 aa5.08□□□□□ -1.6
VPS13A-209ENST00000467124 GCDHQ92947 438 aaPredicted RBP5.08□□□□□ -1.6
VPS13A-209ENST00000467124 PGBD4Q96DM1 585 aa5.08□□□□□ -1.6
VPS13A-209ENST00000467124 RPL10LQ96L21 214 aaKnown RBP5.08□□□□□ -1.6
VPS13A-209ENST00000467124 MRGPRX4Q96LA9 322 aa5.08□□□□□ -1.6
VPS13A-209ENST00000467124 SGCZQ96LD1 299 aa5.08□□□□□ -1.6
VPS13A-209ENST00000467124 SLC38A3Q99624 504 aa5.08□□□□□ -1.6
VPS13A-209ENST00000467124 C1orf43Q9BWL3 253 aa5.08□□□□□ -1.6
VPS13A-209ENST00000467124 KATNBL1Q9H079 304 aa5.08□□□□□ -1.6
VPS13A-209ENST00000467124 MANSC1Q9H8J5 431 aa5.08□□□□□ -1.6
VPS13A-209ENST00000467124 L2HGDHQ9H9P8 463 aa5.08□□□□□ -1.6
VPS13A-209ENST00000467124 MSL2Q9HCI7 577 aa5.08□□□□□ -1.6
VPS13A-209ENST00000467124 CPNE7Q9UBL6 633 aa5.08□□□□□ -1.6
VPS13A-209ENST00000467124 TRPS1Q9UHF7 1281 aa5.08□□□□□ -1.6
VPS13A-209ENST00000467124 TPCN1Q9ULQ1 816 aa5.08□□□□□ -1.6
VPS13A-209ENST00000467124 ABHD14A-ACY1A0A1B0GW23 586 aa5.07□□□□□ -1.6
VPS13A-209ENST00000467124 CCDC189A1A4V9 331 aa5.07□□□□□ -1.6
VPS13A-209ENST00000467124 POM121BA6NF01 834 aa5.07□□□□□ -1.6
VPS13A-209ENST00000467124 PHF2O75151 1096 aa5.07□□□□□ -1.6
VPS13A-209ENST00000467124 GPR32O75388 356 aa5.07□□□□□ -1.6
VPS13A-209ENST00000467124 RPLP2P05387 115 aaKnown RBP5.07□□□□□ -1.6
VPS13A-209ENST00000467124 TYRP14679 529 aa5.07□□□□□ -1.6
VPS13A-209ENST00000467124 BRAFP15056 766 aa5.07□□□□□ -1.6
VPS13A-209ENST00000467124 NPR1P16066 1061 aa5.07□□□□□ -1.6
VPS13A-209ENST00000467124 TNFSF4P23510 183 aa5.07□□□□□ -1.6
VPS13A-209ENST00000467124 CASRP41180 1078 aa5.07□□□□□ -1.6
VPS13A-209ENST00000467124 IL12RB1P42701 662 aa5.07□□□□□ -1.6
VPS13A-209ENST00000467124 WNT3AP56704 352 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms