RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 SEPT2Q15019 361 aa5.29□□□□□ -1.56
VPS13D-203ENST00000466732 DRICH1Q6PGQ1 229 aaPredicted RBP5.29□□□□□ -1.56
VPS13D-203ENST00000466732 ZFPM1Q8IX07 1006 aa5.29□□□□□ -1.56
VPS13D-203ENST00000466732 PQLC1Q8N2U9 271 aa5.29□□□□□ -1.56
VPS13D-203ENST00000466732 SLC35B2Q8TB61 432 aa5.29□□□□□ -1.56
VPS13D-203ENST00000466732 CPT1CQ8TCG5 803 aa5.29□□□□□ -1.56
VPS13D-203ENST00000466732 SSH1Q8WYL5 1049 aa5.29□□□□□ -1.56
VPS13D-203ENST00000466732 TFAP2CQ92754 450 aa5.29□□□□□ -1.56
VPS13D-203ENST00000466732 FAXDC2Q96IV6 333 aa5.29□□□□□ -1.56
VPS13D-203ENST00000466732 UHRF1Q96T88 793 aaPredicted RBP5.29□□□□□ -1.56
VPS13D-203ENST00000466732 PCDH12Q9NPG4 1184 aa5.29□□□□□ -1.56
VPS13D-203ENST00000466732 GPRC5BQ9NZH0 403 aa5.29□□□□□ -1.56
VPS13D-203ENST00000466732 EIF2B4Q9UI10 523 aaKnown RBP5.29□□□□□ -1.56
VPS13D-203ENST00000466732 DNM3Q9UQ16 869 aa5.29□□□□□ -1.56
VPS13D-203ENST00000466732 REXO2Q9Y3B8 237 aaKnown RBP5.29□□□□□ -1.56
VPS13D-203ENST00000466732 ATRNL1Q5VV63 1379 aa5.29□□□□□ -1.56
VPS13D-203ENST00000466732 CXorf49A8MYA2 514 aaPredicted RBP5.28□□□□□ -1.56
VPS13D-203ENST00000466732 ALG1L2C9J202 215 aa5.28□□□□□ -1.56
VPS13D-203ENST00000466732 LEFTY2O00292 366 aa5.28□□□□□ -1.56
VPS13D-203ENST00000466732 PJA2O43164 708 aa5.28□□□□□ -1.56
VPS13D-203ENST00000466732 RECQL4O94761 1208 aa5.28□□□□□ -1.56
VPS13D-203ENST00000466732 ENDOD1O94919 500 aa5.28□□□□□ -1.56
VPS13D-203ENST00000466732 SCAF4O95104 1147 aaKnown RBP5.28□□□□□ -1.56
VPS13D-203ENST00000466732 SLPIP03973 132 aa5.28□□□□□ -1.56
VPS13D-203ENST00000466732 MYBL2P10244 700 aa5.28□□□□□ -1.56
VPS13D-203ENST00000466732 ALOX15P16050 662 aaPredicted RBP5.28□□□□□ -1.56
VPS13D-203ENST00000466732 MCM7P33993 719 aa5.28□□□□□ -1.56
VPS13D-203ENST00000466732 KLF10Q13118 480 aa5.28□□□□□ -1.56
VPS13D-203ENST00000466732 SP140Q13342 867 aa5.28□□□□□ -1.56
VPS13D-203ENST00000466732 ABCB5Q2M3G0 1257 aa5.28□□□□□ -1.56
VPS13D-203ENST00000466732 EFCAB12Q6NXP0 572 aa5.28□□□□□ -1.56
VPS13D-203ENST00000466732 SYT12Q8IV01 421 aa5.28□□□□□ -1.56
VPS13D-203ENST00000466732 ZNF276Q8N554 614 aa5.28□□□□□ -1.56
VPS13D-203ENST00000466732 PPM1NQ8N819 430 aa5.28□□□□□ -1.56
VPS13D-203ENST00000466732 RNF169Q8NCN4 708 aa5.28□□□□□ -1.56
VPS13D-203ENST00000466732 OR10H5Q8NGA6 315 aa5.28□□□□□ -1.56
VPS13D-203ENST00000466732 OR2I1PQ8NGU4 316 aa5.28□□□□□ -1.56
VPS13D-203ENST00000466732 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.28□□□□□ -1.56
VPS13D-203ENST00000466732 SLC25A43Q8WUT9 341 aaPredicted RBP5.28□□□□□ -1.56
VPS13D-203ENST00000466732 JADE3Q92613 823 aa5.28□□□□□ -1.56
VPS13D-203ENST00000466732 MTMR8Q96EF0 704 aa5.28□□□□□ -1.56
VPS13D-203ENST00000466732 PCED1AQ9H1Q7 454 aa5.28□□□□□ -1.56
VPS13D-203ENST00000466732 LDAHQ9H6V9 325 aa5.28□□□□□ -1.56
VPS13D-203ENST00000466732 LANCL2Q9NS86 450 aa5.28□□□□□ -1.56
VPS13D-203ENST00000466732 MKS1Q9NXB0 559 aa5.28□□□□□ -1.56
VPS13D-203ENST00000466732 SIK3Q9Y2K2 1263 aa5.28□□□□□ -1.56
VPS13D-203ENST00000466732 FAM171A2A8MVW0 826 aa5.27□□□□□ -1.57
VPS13D-203ENST00000466732 AHRRA9YTQ3 701 aa5.27□□□□□ -1.57
VPS13D-203ENST00000466732 GABRDO14764 452 aa5.27□□□□□ -1.57
VPS13D-203ENST00000466732 PCDHGA12O60330 932 aa5.27□□□□□ -1.57
VPS13D-203ENST00000466732 RBP3P10745 1247 aa5.27□□□□□ -1.57
VPS13D-203ENST00000466732 MAKP20794 623 aa5.27□□□□□ -1.57
VPS13D-203ENST00000466732 NR4A1P22736 598 aa5.27□□□□□ -1.57
VPS13D-203ENST00000466732 MGAT1P26572 445 aa5.27□□□□□ -1.57
VPS13D-203ENST00000466732 GUCY1A2P33402 732 aa5.27□□□□□ -1.57
VPS13D-203ENST00000466732 SLC6A9P48067 706 aa5.27□□□□□ -1.57
VPS13D-203ENST00000466732 CLRN1P58418 232 aa5.27□□□□□ -1.57
VPS13D-203ENST00000466732 ZFP28Q8NHY6 868 aa5.27□□□□□ -1.57
VPS13D-203ENST00000466732 NRG4Q8WWG1 115 aa5.27□□□□□ -1.57
VPS13D-203ENST00000466732 STON2Q8WXE9 905 aa5.27□□□□□ -1.57
VPS13D-203ENST00000466732 CLIP3Q96DZ5 547 aa5.27□□□□□ -1.57
VPS13D-203ENST00000466732 SORCS2Q96PQ0 1159 aa5.27□□□□□ -1.57
VPS13D-203ENST00000466732 FAM193BQ96PV7 902 aaPredicted RBP5.27□□□□□ -1.57
VPS13D-203ENST00000466732 DCLRE1CQ96SD1 692 aaKnown RBP5.27□□□□□ -1.57
VPS13D-203ENST00000466732 SENP6Q9GZR1 1112 aaPredicted RBP5.27□□□□□ -1.57
VPS13D-203ENST00000466732 ZNF768Q9H5H4 540 aaKnown RBP5.27□□□□□ -1.57
VPS13D-203ENST00000466732 NRDE2Q9H7Z3 1164 aa5.27□□□□□ -1.57
VPS13D-203ENST00000466732 POGKQ9P215 609 aa5.27□□□□□ -1.57
VPS13D-203ENST00000466732 ING1Q9UK53 422 aaPredicted RBP5.27□□□□□ -1.57
VPS13D-203ENST00000466732 PCDHGA9Q9Y5G4 932 aaKnown RBP5.27□□□□□ -1.57
VPS13D-203ENST00000466732 PCDHGA8Q9Y5G5 932 aa5.27□□□□□ -1.57
VPS13D-203ENST00000466732 PCDHGA7Q9Y5G6 932 aa5.27□□□□□ -1.57
VPS13D-203ENST00000466732 PCDHGA6Q9Y5G7 932 aa5.27□□□□□ -1.57
VPS13D-203ENST00000466732 PCDHGA3Q9Y5H0 932 aa5.27□□□□□ -1.57
VPS13D-203ENST00000466732 WASHC2CQ9Y4E1 1318 aa5.26□□□□□ -1.57
VPS13D-203ENST00000466732 FZD9O00144 591 aa5.26□□□□□ -1.57
VPS13D-203ENST00000466732 NDUFS2O75306 463 aa5.26□□□□□ -1.57
VPS13D-203ENST00000466732 SNRPA1P09661 255 aaKnown RBP5.26□□□□□ -1.57
VPS13D-203ENST00000466732 RAP2AP10114 183 aa5.26□□□□□ -1.57
VPS13D-203ENST00000466732 IL2RBP14784 551 aa5.26□□□□□ -1.57
VPS13D-203ENST00000466732 PTGS2P35354 604 aa5.26□□□□□ -1.57
VPS13D-203ENST00000466732 NHLH2Q02577 135 aa5.26□□□□□ -1.57
VPS13D-203ENST00000466732 ACAP2Q15057 778 aa5.26□□□□□ -1.57
VPS13D-203ENST00000466732 PCBP2Q15366 365 aaKnown RBP eCLIP5.26□□□□□ -1.57
VPS13D-203ENST00000466732 ATXN7L2Q5T6C5 722 aaPredicted RBP5.26□□□□□ -1.57
VPS13D-203ENST00000466732 AFMIDQ63HM1 303 aa5.26□□□□□ -1.57
VPS13D-203ENST00000466732 GDF7Q7Z4P5 450 aa5.26□□□□□ -1.57
VPS13D-203ENST00000466732 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.26□□□□□ -1.57
VPS13D-203ENST00000466732 ZCRB1Q8TBF4 217 aaKnown RBP5.26□□□□□ -1.57
VPS13D-203ENST00000466732 NEU4Q8WWR8 484 aaPredicted RBP5.26□□□□□ -1.57
VPS13D-203ENST00000466732 DPF2Q92785 391 aa5.26□□□□□ -1.57
VPS13D-203ENST00000466732 HAS1Q92839 578 aa5.26□□□□□ -1.57
VPS13D-203ENST00000466732 FUBP3Q96I24 572 aaKnown RBP eCLIP5.26□□□□□ -1.57
VPS13D-203ENST00000466732 MRI1Q9BV20 369 aa5.26□□□□□ -1.57
VPS13D-203ENST00000466732 MOCS1Q9NZB8 636 aa5.26□□□□□ -1.57
VPS13D-203ENST00000466732 TRPM5Q9NZQ8 1165 aa5.26□□□□□ -1.57
VPS13D-203ENST00000466732 TUBD1Q9UJT1 453 aa5.26□□□□□ -1.57
VPS13D-203ENST00000466732 AJAP1Q9UKB5 411 aaPredicted RBP5.26□□□□□ -1.57
VPS13D-203ENST00000466732 CHST2Q9Y4C5 530 aa5.26□□□□□ -1.57
VPS13D-203ENST00000466732 PNPLA7Q6ZV29 1317 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms