RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 SLC16A4O15374 487 aa6.56□□□□□ -1.36
CHMP3-206ENST00000466032 P4HA2O15460 535 aa6.56□□□□□ -1.36
CHMP3-206ENST00000466032 CLDN3O15551 220 aa6.56□□□□□ -1.36
CHMP3-206ENST00000466032 ERLIN2O94905 339 aa6.56□□□□□ -1.36
CHMP3-206ENST00000466032 PRPF6O94906 941 aaKnown RBP6.56□□□□□ -1.36
CHMP3-206ENST00000466032 NR3C1P04150 777 aa6.56□□□□□ -1.36
CHMP3-206ENST00000466032 TPM1P09493 284 aa6.56□□□□□ -1.36
CHMP3-206ENST00000466032 MYBP10242 640 aa6.56□□□□□ -1.36
CHMP3-206ENST00000466032 CCL5P13501 91 aa6.56□□□□□ -1.36
CHMP3-206ENST00000466032 KRT13P13646 458 aa6.56□□□□□ -1.36
CHMP3-206ENST00000466032 NR2F2P24468 414 aa6.56□□□□□ -1.36
CHMP3-206ENST00000466032 NMT1P30419 496 aaKnown RBP6.56□□□□□ -1.36
CHMP3-206ENST00000466032 CRYBB1P53674 252 aaPredicted RBP6.56□□□□□ -1.36
CHMP3-206ENST00000466032 AP3M2P53677 418 aa6.56□□□□□ -1.36
CHMP3-206ENST00000466032 UBASH3AP57075 661 aa6.56□□□□□ -1.36
CHMP3-206ENST00000466032 IGBP1P78318 339 aa6.56□□□□□ -1.36
CHMP3-206ENST00000466032 BEX3Q00994 111 aa6.56□□□□□ -1.36
CHMP3-206ENST00000466032 BFSP2Q13515 415 aa6.56□□□□□ -1.36
CHMP3-206ENST00000466032 CAPSQ13938 189 aa6.56□□□□□ -1.36
CHMP3-206ENST00000466032 MAN2A1Q16706 1144 aa6.56□□□□□ -1.36
CHMP3-206ENST00000466032 CCDC40Q4G0X9 1142 aa6.56□□□□□ -1.36
CHMP3-206ENST00000466032 TCP11X2Q5H9J9 407 aa6.56□□□□□ -1.36
CHMP3-206ENST00000466032 MARCH8Q5T0T0 291 aa6.56□□□□□ -1.36
CHMP3-206ENST00000466032 FKBP15Q5T1M5 1219 aa6.56□□□□□ -1.36
CHMP3-206ENST00000466032 MRPL14Q6P1L8 145 aaKnown RBP6.56□□□□□ -1.36
CHMP3-206ENST00000466032 ARMCX5Q6P1M9 558 aa6.56□□□□□ -1.36
CHMP3-206ENST00000466032 CXCL17Q6UXB2 119 aa6.56□□□□□ -1.36
CHMP3-206ENST00000466032 MAEAQ7L5Y9 396 aa6.56□□□□□ -1.36
CHMP3-206ENST00000466032 SERINC5Q86VE9 423 aa6.56□□□□□ -1.36
CHMP3-206ENST00000466032 CD302Q8IX05 232 aa6.56□□□□□ -1.36
CHMP3-206ENST00000466032 SMYD4Q8IYR2 804 aaPredicted RBP6.56□□□□□ -1.36
CHMP3-206ENST00000466032 HACE1Q8IYU2 909 aa6.56□□□□□ -1.36
CHMP3-206ENST00000466032 KIAA0319LQ8IZA0 1049 aa6.56□□□□□ -1.36
CHMP3-206ENST00000466032 SLC43A3Q8NBI5 491 aa6.56□□□□□ -1.36
CHMP3-206ENST00000466032 XXYLT1Q8NBI6 393 aa6.56□□□□□ -1.36
CHMP3-206ENST00000466032 RNF149Q8NC42 400 aa6.56□□□□□ -1.36
CHMP3-206ENST00000466032 CAGE1Q8TC20 777 aa6.56□□□□□ -1.36
CHMP3-206ENST00000466032 NLRP7Q8WX94 980 aa6.56□□□□□ -1.36
CHMP3-206ENST00000466032 BICD1Q96G01 975 aa6.56□□□□□ -1.36
CHMP3-206ENST00000466032 FAM81BQ96LP2 452 aa6.56□□□□□ -1.36
CHMP3-206ENST00000466032 SCLT1Q96NL6 688 aa6.56□□□□□ -1.36
CHMP3-206ENST00000466032 TOX2Q96NM4 488 aa6.56□□□□□ -1.36
CHMP3-206ENST00000466032 PPP1R9BQ96SB3 815 aa6.56□□□□□ -1.36
CHMP3-206ENST00000466032 NUP58Q9BVL2 599 aa6.56□□□□□ -1.36
CHMP3-206ENST00000466032 SEMA6BQ9H3T3 888 aa6.56□□□□□ -1.36
CHMP3-206ENST00000466032 FZD8Q9H461 694 aa6.56□□□□□ -1.36
CHMP3-206ENST00000466032 GPRC5CQ9NQ84 441 aa6.56□□□□□ -1.36
CHMP3-206ENST00000466032 STARD7Q9NQZ5 370 aa6.56□□□□□ -1.36
CHMP3-206ENST00000466032 CHST12Q9NRB3 414 aa6.56□□□□□ -1.36
CHMP3-206ENST00000466032 AGPAT3Q9NRZ7 376 aa6.56□□□□□ -1.36
CHMP3-206ENST00000466032 SETD4Q9NVD3 440 aa6.56□□□□□ -1.36
CHMP3-206ENST00000466032 FANCLQ9NW38 375 aa6.56□□□□□ -1.36
CHMP3-206ENST00000466032 DMAC2Q9NW81 257 aa6.56□□□□□ -1.36
CHMP3-206ENST00000466032 HDAC6Q9UBN7 1215 aa6.56□□□□□ -1.36
CHMP3-206ENST00000466032 ARMCX3Q9UH62 379 aaPredicted RBP6.56□□□□□ -1.36
CHMP3-206ENST00000466032 NOD1Q9Y239 953 aa6.56□□□□□ -1.36
CHMP3-206ENST00000466032 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.56□□□□□ -1.365e-7■□□□□ 8.3
CHMP3-206ENST00000466032 DOCK5Q9H7D0 1870 aa6.56□□□□□ -1.36
CHMP3-206ENST00000466032 SCN10AQ9Y5Y9 1956 aa6.55□□□□□ -1.36
CHMP3-206ENST00000466032 A0A1B0GTH6 734 aa6.55□□□□□ -1.36
CHMP3-206ENST00000466032 A0A1W2PQC6 194 aa6.55□□□□□ -1.36
CHMP3-206ENST00000466032 TMEM150BA6NC51 233 aa6.55□□□□□ -1.36
CHMP3-206ENST00000466032 ZNF233A6NK53 670 aa6.55□□□□□ -1.36
CHMP3-206ENST00000466032 KCNJ18B7U540 433 aa6.55□□□□□ -1.36
CHMP3-206ENST00000466032 INO80B-WBP1J3KQ70 363 aa6.55□□□□□ -1.36
CHMP3-206ENST00000466032 GPR182O15218 404 aa6.55□□□□□ -1.36
CHMP3-206ENST00000466032 TGFB1I1O43294 461 aa6.55□□□□□ -1.36
CHMP3-206ENST00000466032 EXTL3O43909 919 aa6.55□□□□□ -1.36
CHMP3-206ENST00000466032 ZNF500O60304 480 aaPredicted RBP6.55□□□□□ -1.36
CHMP3-206ENST00000466032 EXOC3O60645 756 aa6.55□□□□□ -1.36
CHMP3-206ENST00000466032 SGPL1O95470 568 aa6.55□□□□□ -1.36
CHMP3-206ENST00000466032 PRKCBP05771 671 aa6.55□□□□□ -1.36
CHMP3-206ENST00000466032 SRGAP2CP0DJJ0 459 aa6.55□□□□□ -1.36
CHMP3-206ENST00000466032 HSPA1AP0DMV8 641 aaKnown RBP6.55□□□□□ -1.36
CHMP3-206ENST00000466032 HSPA1BP0DMV9 641 aaKnown RBP6.55□□□□□ -1.36
CHMP3-206ENST00000466032 SKIP12755 728 aa6.55□□□□□ -1.36
CHMP3-206ENST00000466032 EIF4BP23588 611 aaKnown RBP6.55□□□□□ -1.36
CHMP3-206ENST00000466032 GTF2H1P32780 548 aa6.55□□□□□ -1.36
CHMP3-206ENST00000466032 MTIF2P46199 727 aaKnown RBP6.55□□□□□ -1.36
CHMP3-206ENST00000466032 GJA8P48165 433 aa6.55□□□□□ -1.36
CHMP3-206ENST00000466032 GPC3P51654 580 aa6.55□□□□□ -1.36
CHMP3-206ENST00000466032 STX17P56962 302 aa6.55□□□□□ -1.36
CHMP3-206ENST00000466032 GSDMDP57764 484 aa6.55□□□□□ -1.36
CHMP3-206ENST00000466032 NLRP11P59045 1033 aaKnown RBP6.55□□□□□ -1.36
CHMP3-206ENST00000466032 FANCCQ00597 558 aa6.55□□□□□ -1.36
CHMP3-206ENST00000466032 RBL2Q08999 1139 aa6.55□□□□□ -1.36
CHMP3-206ENST00000466032 PRPF4BQ13523 1007 aaKnown RBP6.55□□□□□ -1.36
CHMP3-206ENST00000466032 KCNJ12Q14500 433 aa6.55□□□□□ -1.36
CHMP3-206ENST00000466032 DCAF4L1Q3SXM0 396 aa6.55□□□□□ -1.36
CHMP3-206ENST00000466032 TMEM63BQ5T3F8 832 aa6.55□□□□□ -1.36
CHMP3-206ENST00000466032 LRRC55Q6ZSA7 311 aa6.55□□□□□ -1.36
CHMP3-206ENST00000466032 TSHZ1Q6ZSZ6 1077 aa6.55□□□□□ -1.36
CHMP3-206ENST00000466032 NT5DC4Q86YG4 428 aa6.55□□□□□ -1.36
CHMP3-206ENST00000466032 NELFCDQ8IXH7 590 aa6.55□□□□□ -1.36
CHMP3-206ENST00000466032 GPD1LQ8N335 351 aa6.55□□□□□ -1.36
CHMP3-206ENST00000466032 LRRC71Q8N4P6 559 aa6.55□□□□□ -1.36
CHMP3-206ENST00000466032 ASAP3Q8TDY4 903 aa6.55□□□□□ -1.36
CHMP3-206ENST00000466032 NANOS1Q8WY41 292 aaKnown RBP6.55□□□□□ -1.36
CHMP3-206ENST00000466032 POMGNT1Q8WZA1 660 aa6.55□□□□□ -1.36
CHMP3-206ENST00000466032 ZNF333Q96JL9 665 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms