RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 MYCT1Q8N699 235 aa21.09■□□□□ 0.97
SDF4-205ENST00000465727 LMO3Q8TAP4 145 aa21.09■□□□□ 0.97
SDF4-205ENST00000465727 LENG9Q96B70 501 aa21.09■□□□□ 0.97
SDF4-205ENST00000465727 LRRC37BQ96QE4 947 aa21.09■□□□□ 0.97
SDF4-205ENST00000465727 TRAIPQ9BWF2 469 aa21.09■□□□□ 0.97
SDF4-205ENST00000465727 MYLK2Q9H1R3 596 aa21.09■□□□□ 0.97
SDF4-205ENST00000465727 PARVGQ9HBI0 331 aa21.09■□□□□ 0.97
SDF4-205ENST00000465727 AGPAT3Q9NRZ7 376 aa21.09■□□□□ 0.97
SDF4-205ENST00000465727 ENO4A6NNW6 628 aa21.09■□□□□ 0.97
SDF4-205ENST00000465727 P4HA2O15460 535 aa21.09■□□□□ 0.97
SDF4-205ENST00000465727 NPTXRO95502 500 aa21.09■□□□□ 0.97
SDF4-205ENST00000465727 LMNAP02545 664 aaKnown RBP21.09■□□□□ 0.97
SDF4-205ENST00000465727 PECAM1P16284 738 aaPredicted RBP21.09■□□□□ 0.97
SDF4-205ENST00000465727 ALDH3A1P30838 453 aa21.09■□□□□ 0.97
SDF4-205ENST00000465727 RAD23BP54727 409 aa21.09■□□□□ 0.97
SDF4-205ENST00000465727 DDB1Q16531 1140 aa21.09■□□□□ 0.97
SDF4-205ENST00000465727 TSNAXIP1Q2TAA8 658 aa21.09■□□□□ 0.97
SDF4-205ENST00000465727 SGO2Q562F6 1265 aa21.09■□□□□ 0.97
SDF4-205ENST00000465727 EGFL6Q8IUX8 553 aa21.09■□□□□ 0.97
SDF4-205ENST00000465727 KCNV2Q8TDN2 545 aa21.09■□□□□ 0.97
SDF4-205ENST00000465727 UVRAGQ9P2Y5 699 aa21.09■□□□□ 0.97
SDF4-205ENST00000465727 NKX1-2Q9UD57 310 aaPredicted RBP21.09■□□□□ 0.97
SDF4-205ENST00000465727 SPATA31A5Q5VU36 1347 aa21.08■□□□□ 0.97
SDF4-205ENST00000465727 SPATA31A7Q8IWB4 1347 aa21.08■□□□□ 0.97
SDF4-205ENST00000465727 FAM47DPA6NHR8 397 aa21.08■□□□□ 0.97
SDF4-205ENST00000465727 MEIS2O14770 477 aa21.08■□□□□ 0.97
SDF4-205ENST00000465727 SORBS3O60504 671 aa21.08■□□□□ 0.97
SDF4-205ENST00000465727 SNUPNO95149 360 aaKnown RBP21.08■□□□□ 0.97
SDF4-205ENST00000465727 GAS8O95995 478 aa21.08■□□□□ 0.97
SDF4-205ENST00000465727 FOSP01100 380 aaPredicted RBP21.08■□□□□ 0.97
SDF4-205ENST00000465727 TRIM49P0CI25 452 aa21.08■□□□□ 0.97
SDF4-205ENST00000465727 TRIM49CP0CI26 452 aa21.08■□□□□ 0.97
SDF4-205ENST00000465727 NMT1P30419 496 aaKnown RBP21.08■□□□□ 0.97
SDF4-205ENST00000465727 CHKAP35790 457 aa21.08■□□□□ 0.97
SDF4-205ENST00000465727 SLC18A1P54219 525 aa21.08■□□□□ 0.97
SDF4-205ENST00000465727 QRICH1Q2TAL8 776 aa21.08■□□□□ 0.97
SDF4-205ENST00000465727 ANO7Q6IWH7 933 aa21.08■□□□□ 0.97
SDF4-205ENST00000465727 SLC30A9Q6PML9 568 aa21.08■□□□□ 0.97
SDF4-205ENST00000465727 ZNF564Q8TBZ8 553 aaPredicted RBP21.08■□□□□ 0.97
SDF4-205ENST00000465727 ERP27Q96DN0 273 aa21.08■□□□□ 0.97
SDF4-205ENST00000465727 UBN1Q9NPG3 1134 aa21.08■□□□□ 0.97
SDF4-205ENST00000465727 VAV3Q9UKW4 847 aa21.08■□□□□ 0.97
SDF4-205ENST00000465727 THRAP3Q9Y2W1 955 aaKnown RBP21.08■□□□□ 0.97
SDF4-205ENST00000465727 GREB1LQ9C091 1923 aaPredicted RBP21.08■□□□□ 0.97
SDF4-205ENST00000465727 TRAFD1O14545 582 aaPredicted RBP21.08■□□□□ 0.96
SDF4-205ENST00000465727 CYP1A2P05177 515 aa21.08■□□□□ 0.96
SDF4-205ENST00000465727 PCK1P35558 622 aa21.08■□□□□ 0.96
SDF4-205ENST00000465727 INHBEP58166 350 aa21.08■□□□□ 0.96
SDF4-205ENST00000465727 BIRC2Q13490 618 aa21.08■□□□□ 0.96
SDF4-205ENST00000465727 KYNUQ16719 465 aa21.08■□□□□ 0.96
SDF4-205ENST00000465727 CEP128Q6ZU80 1094 aa21.08■□□□□ 0.96
SDF4-205ENST00000465727 APBB1IPQ7Z5R6 666 aaPredicted RBP21.08■□□□□ 0.96
SDF4-205ENST00000465727 DHX37Q8IY37 1157 aaKnown RBP21.08■□□□□ 0.96
SDF4-205ENST00000465727 BBOF1Q8ND07 529 aa21.08■□□□□ 0.96
SDF4-205ENST00000465727 FAM13CQ8NE31 585 aa21.08■□□□□ 0.96
SDF4-205ENST00000465727 ASAP3Q8TDY4 903 aa21.08■□□□□ 0.96
SDF4-205ENST00000465727 EIF2AK1Q9BQI3 630 aaKnown RBP21.08■□□□□ 0.96
SDF4-205ENST00000465727 NINJ2Q9NZG7 142 aa21.08■□□□□ 0.96
SDF4-205ENST00000465727 NAALADL1Q9UQQ1 740 aa21.08■□□□□ 0.96
SDF4-205ENST00000465727 MPHOSPH10O00566 681 aaKnown RBP21.07■□□□□ 0.96
SDF4-205ENST00000465727 HNRNPCL1O60812 293 aaKnown RBP21.07■□□□□ 0.96
SDF4-205ENST00000465727 IVDP26440 423 aa21.07■□□□□ 0.96
SDF4-205ENST00000465727 CIITAP33076 1130 aa21.07■□□□□ 0.96
SDF4-205ENST00000465727 SREBF1P36956 1147 aa21.07■□□□□ 0.96
SDF4-205ENST00000465727 CYP4A11Q02928 519 aa21.07■□□□□ 0.96
SDF4-205ENST00000465727 TRIM68Q6AZZ1 485 aa21.07■□□□□ 0.96
SDF4-205ENST00000465727 ZNF720Q7Z2F6 126 aa21.07■□□□□ 0.96
SDF4-205ENST00000465727 SRRM1Q8IYB3 904 aaKnown RBP21.07■□□□□ 0.96
SDF4-205ENST00000465727 TSC22D3Q99576 134 aa21.07■□□□□ 0.96
SDF4-205ENST00000465727 CD209Q9NNX6 404 aa21.07■□□□□ 0.96
SDF4-205ENST00000465727 UBE2TQ9NPD8 197 aaPredicted RBP21.07■□□□□ 0.96
SDF4-205ENST00000465727 EURLQ9NYK6 297 aa21.07■□□□□ 0.96
SDF4-205ENST00000465727 NARFQ9UHQ1 456 aa21.07■□□□□ 0.96
SDF4-205ENST00000465727 CNTNAP4Q9C0A0 1308 aa21.07■□□□□ 0.96
SDF4-205ENST00000465727 DPPA5A6NC42 116 aa21.06■□□□□ 0.96
SDF4-205ENST00000465727 DLATP10515 647 aaKnown RBP21.06■□□□□ 0.96
SDF4-205ENST00000465727 IL1R1P14778 569 aa21.06■□□□□ 0.96
SDF4-205ENST00000465727 RXRBP28702 533 aa21.06■□□□□ 0.96
SDF4-205ENST00000465727 CYP2J2P51589 502 aa21.06■□□□□ 0.96
SDF4-205ENST00000465727 ITGA8P53708 1063 aa21.06■□□□□ 0.96
SDF4-205ENST00000465727 GRAPQ13588 217 aa21.06■□□□□ 0.96
SDF4-205ENST00000465727 ZC2HC1CQ53FD0 456 aaPredicted RBP21.06■□□□□ 0.96
SDF4-205ENST00000465727 C1orf186Q6ZWK4 172 aa21.06■□□□□ 0.96
SDF4-205ENST00000465727 KCTD1Q719H9 257 aa21.06■□□□□ 0.96
SDF4-205ENST00000465727 CLEC10AQ8IUN9 316 aa21.06■□□□□ 0.96
SDF4-205ENST00000465727 MFN1Q8IWA4 741 aa21.06■□□□□ 0.96
SDF4-205ENST00000465727 LINC00116Q8NCU8 138 aa21.06■□□□□ 0.96
SDF4-205ENST00000465727 GRAPLQ8TC17 118 aaPredicted RBP21.06■□□□□ 0.96
SDF4-205ENST00000465727 PARD3BQ8TEW8 1205 aa21.06■□□□□ 0.96
SDF4-205ENST00000465727 NUDCD1Q96RS6 583 aa21.06■□□□□ 0.96
SDF4-205ENST00000465727 NUP85Q9BW27 656 aa21.06■□□□□ 0.96
SDF4-205ENST00000465727 TUFT1Q9NNX1 390 aa21.06■□□□□ 0.96
SDF4-205ENST00000465727 CPSF2Q9P2I0 782 aaKnown RBP21.06■□□□□ 0.96
SDF4-205ENST00000465727 USP21Q9UK80 565 aa21.06■□□□□ 0.96
SDF4-205ENST00000465727 GTF3C4Q9UKN8 822 aa21.06■□□□□ 0.96
SDF4-205ENST00000465727 ATF2P15336 505 aa21.06■□□□□ 0.96
SDF4-205ENST00000465727 FOXN2P32314 431 aa21.06■□□□□ 0.96
SDF4-205ENST00000465727 MOGSQ13724 837 aa21.06■□□□□ 0.96
SDF4-205ENST00000465727 COG2Q14746 738 aa21.06■□□□□ 0.96
SDF4-205ENST00000465727 CYP4X1Q8N118 509 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms