RNA–Protein interactions for RNA: ENST00000463688.6

COMMD3-205, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,407 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-205ENST00000463688 ACAP3Q96P50 834 aa14.75□□□□□ -0.05
COMMD3-205ENST00000463688 PYM1Q9BRP8 204 aaKnown RBP14.75□□□□□ -0.05
COMMD3-205ENST00000463688 MMTAG2Q9BU76 263 aaKnown RBP14.75□□□□□ -0.05
COMMD3-205ENST00000463688 RHOBTB2Q9BYZ6 727 aa14.75□□□□□ -0.05
COMMD3-205ENST00000463688 PLEKHA4Q9H4M7 779 aa14.75□□□□□ -0.05
COMMD3-205ENST00000463688 SFXN1Q9H9B4 322 aa14.75□□□□□ -0.05
COMMD3-205ENST00000463688 DNAJB4Q9UDY4 337 aa14.75□□□□□ -0.05
COMMD3-205ENST00000463688 PRG3Q9Y2Y8 225 aaPredicted RBP14.75□□□□□ -0.05
COMMD3-205ENST00000463688 USP15Q9Y4E8 981 aaPredicted RBP14.75□□□□□ -0.05
COMMD3-205ENST00000463688 HCFC2Q9Y5Z7 792 aa14.75□□□□□ -0.05
COMMD3-205ENST00000463688 SPTBN5Q9NRC6 3674 aaKnown RBP14.74□□□□□ -0.05
COMMD3-205ENST00000463688 LOXHD1Q8IVV2 1947 aa14.74□□□□□ -0.05
COMMD3-205ENST00000463688 HIDE1A8MVS5 230 aa14.74□□□□□ -0.05
COMMD3-205ENST00000463688 CLDN3O15551 220 aa14.74□□□□□ -0.05
COMMD3-205ENST00000463688 RECQL4O94761 1208 aa14.74□□□□□ -0.05
COMMD3-205ENST00000463688 BRD1O95696 1058 aa14.74□□□□□ -0.05
COMMD3-205ENST00000463688 CDC25AP30304 524 aa14.74□□□□□ -0.05
COMMD3-205ENST00000463688 KCNC3Q14003 757 aa14.74□□□□□ -0.05
COMMD3-205ENST00000463688 PTPN14Q15678 1187 aa14.74□□□□□ -0.05
COMMD3-205ENST00000463688 CLUL1Q15846 466 aa14.74□□□□□ -0.05
COMMD3-205ENST00000463688 MPZL3Q6UWV2 235 aa14.74□□□□□ -0.05
COMMD3-205ENST00000463688 STAMQ92783 540 aa14.74□□□□□ -0.05
COMMD3-205ENST00000463688 ZFP42Q96MM3 310 aa14.74□□□□□ -0.05
COMMD3-205ENST00000463688 ACO2Q99798 780 aaKnown RBP14.74□□□□□ -0.05
COMMD3-205ENST00000463688 PLEKHA5Q9HAU0 1116 aa14.74□□□□□ -0.05
COMMD3-205ENST00000463688 FNIP2Q9P278 1114 aa14.74□□□□□ -0.05
COMMD3-205ENST00000463688 HCSTQ9UBK5 93 aa14.74□□□□□ -0.05
COMMD3-205ENST00000463688 SEL1LQ9UBV2 794 aa14.74□□□□□ -0.05
COMMD3-205ENST00000463688 BARX2Q9UMQ3 279 aaPredicted RBP14.74□□□□□ -0.05
COMMD3-205ENST00000463688 ARIH1Q9Y4X5 557 aaPredicted RBP14.74□□□□□ -0.05
COMMD3-205ENST00000463688 HES2Q9Y543 173 aa14.74□□□□□ -0.05
COMMD3-205ENST00000463688 FNDC1Q4ZHG4 1894 aaPredicted RBP14.74□□□□□ -0.05
COMMD3-205ENST00000463688 ARHGEF37A1IGU5 675 aa14.73□□□□□ -0.05
COMMD3-205ENST00000463688 MEIS3P2A8K0S8 358 aa14.73□□□□□ -0.05
COMMD3-205ENST00000463688 PP2D1A8MPX8 630 aa14.73□□□□□ -0.05
COMMD3-205ENST00000463688 TMEM189-UBE2V1I3L0A0 370 aa14.73□□□□□ -0.05
COMMD3-205ENST00000463688 LINC01565O15544 149 aa14.73□□□□□ -0.05
COMMD3-205ENST00000463688 GPR37L1O60883 481 aa14.73□□□□□ -0.05
COMMD3-205ENST00000463688 GLP2RO95838 553 aa14.73□□□□□ -0.05
COMMD3-205ENST00000463688 GLUD1P00367 558 aa14.73□□□□□ -0.05
COMMD3-205ENST00000463688 RPL9P32969 192 aaKnown RBP14.73□□□□□ -0.05
COMMD3-205ENST00000463688 GTF2F1P35269 517 aaKnown RBP eCLIP14.73□□□□□ -0.05
COMMD3-205ENST00000463688 DSG1Q02413 1049 aa14.73□□□□□ -0.05
COMMD3-205ENST00000463688 DLX2Q07687 328 aaPredicted RBP14.73□□□□□ -0.05
COMMD3-205ENST00000463688 RRAGBQ5VZM2 374 aa14.73□□□□□ -0.05
COMMD3-205ENST00000463688 DCLRE1AQ6PJP8 1040 aa14.73□□□□□ -0.05
COMMD3-205ENST00000463688 C15orf39Q6ZRI6 1047 aa14.73□□□□□ -0.05
COMMD3-205ENST00000463688 BSNDQ8WZ55 320 aa14.73□□□□□ -0.05
COMMD3-205ENST00000463688 SUSD6Q92537 303 aa14.73□□□□□ -0.05
COMMD3-205ENST00000463688 LARP4BQ92615 738 aaKnown RBP14.73□□□□□ -0.05
COMMD3-205ENST00000463688 ACSF2Q96CM8 615 aaPredicted RBP14.73□□□□□ -0.05
COMMD3-205ENST00000463688 BICD1Q96G01 975 aa14.73□□□□□ -0.05
COMMD3-205ENST00000463688 FBXL18Q96ME1 805 aa14.73□□□□□ -0.05
COMMD3-205ENST00000463688 NECAB3Q96P71 396 aaPredicted RBP14.73□□□□□ -0.05
COMMD3-205ENST00000463688 RUSC1Q9BVN2 902 aa14.73□□□□□ -0.05
COMMD3-205ENST00000463688 SNTG2Q9NY99 539 aa14.73□□□□□ -0.05
COMMD3-205ENST00000463688 USTQ9Y2C2 406 aa14.73□□□□□ -0.05
COMMD3-205ENST00000463688 XIRP2A4UGR9 3374 aa14.73□□□□□ -0.05
COMMD3-205ENST00000463688 MAPTP10636 758 aaKnown RBP14.72□□□□□ -0.05
COMMD3-205ENST00000463688 MATR3P43243 847 aaKnown RBP eCLIP14.72□□□□□ -0.05
COMMD3-205ENST00000463688 AMPD3Q01432 767 aa14.72□□□□□ -0.05
COMMD3-205ENST00000463688 POU5F1Q01860 360 aaKnown RBP14.72□□□□□ -0.05
COMMD3-205ENST00000463688 ALCAMQ13740 583 aa14.72□□□□□ -0.05
COMMD3-205ENST00000463688 SLFN12LQ6IEE8 588 aa14.72□□□□□ -0.05
COMMD3-205ENST00000463688 LLGL2Q6P1M3 1020 aa14.72□□□□□ -0.05
COMMD3-205ENST00000463688 FUT10Q6P4F1 479 aa14.72□□□□□ -0.05
COMMD3-205ENST00000463688 STXBP4Q6ZWJ1 553 aa14.72□□□□□ -0.05
COMMD3-205ENST00000463688 SV2BQ7L1I2 683 aa14.72□□□□□ -0.05
COMMD3-205ENST00000463688 GPBP1Q86WP2 473 aa14.72□□□□□ -0.05
COMMD3-205ENST00000463688 CD302Q8IX05 232 aa14.72□□□□□ -0.05
COMMD3-205ENST00000463688 MYCT1Q8N699 235 aa14.72□□□□□ -0.05
COMMD3-205ENST00000463688 CMASQ8NFW8 434 aaPredicted RBP14.72□□□□□ -0.05
COMMD3-205ENST00000463688 RAD54LQ92698 747 aa14.72□□□□□ -0.05
COMMD3-205ENST00000463688 HVCN1Q96D96 273 aa14.72□□□□□ -0.05
COMMD3-205ENST00000463688 KLHL5Q96PQ7 755 aa14.72□□□□□ -0.05
COMMD3-205ENST00000463688 PNMA5Q96PV4 448 aa14.72□□□□□ -0.05
COMMD3-205ENST00000463688 TTPALQ9BTX7 342 aa14.72□□□□□ -0.05
COMMD3-205ENST00000463688 OXCT2Q9BYC2 517 aaPredicted RBP14.72□□□□□ -0.05
COMMD3-205ENST00000463688 CUEDC2Q9H467 287 aa14.72□□□□□ -0.05
COMMD3-205ENST00000463688 RXFP1Q9HBX9 757 aa14.72□□□□□ -0.05
COMMD3-205ENST00000463688 CHST7Q9NS84 486 aa14.72□□□□□ -0.05
COMMD3-205ENST00000463688 CFAP45Q9UL16 551 aa14.72□□□□□ -0.05
COMMD3-205ENST00000463688 EXOC7Q9UPT5 735 aa14.72□□□□□ -0.05
COMMD3-205ENST00000463688 HCN4Q9Y3Q4 1203 aa14.72□□□□□ -0.05
COMMD3-205ENST00000463688 CLTAP09496 248 aa14.71□□□□□ -0.05
COMMD3-205ENST00000463688 GAP43P17677 238 aa14.71□□□□□ -0.05
COMMD3-205ENST00000463688 LIG4P49917 911 aa14.71□□□□□ -0.05
COMMD3-205ENST00000463688 NOLC1Q14978 699 aaKnown RBP eCLIP14.71□□□□□ -0.05
COMMD3-205ENST00000463688 SLC39A14Q15043 492 aa14.71□□□□□ -0.05
COMMD3-205ENST00000463688 POSTNQ15063 836 aa14.71□□□□□ -0.05
COMMD3-205ENST00000463688 STK38Q15208 465 aa14.71□□□□□ -0.05
COMMD3-205ENST00000463688 HERC4Q5GLZ8 1057 aaPredicted RBP14.71□□□□□ -0.05
COMMD3-205ENST00000463688 NT5DC1Q5TFE4 455 aa14.71□□□□□ -0.05
COMMD3-205ENST00000463688 OTOP3Q7RTS5 596 aa14.71□□□□□ -0.05
COMMD3-205ENST00000463688 TMEM161BQ8NDZ6 487 aa14.71□□□□□ -0.05
COMMD3-205ENST00000463688 KIFC3Q9BVG8 833 aa14.71□□□□□ -0.05
COMMD3-205ENST00000463688 S1PR5Q9H228 398 aa14.71□□□□□ -0.05
COMMD3-205ENST00000463688 KLK14Q9P0G3 267 aa14.71□□□□□ -0.05
COMMD3-205ENST00000463688 GDAQ9Y2T3 454 aa14.71□□□□□ -0.05
COMMD3-205ENST00000463688 PRR33A8MZF0 331 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms