RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 VN1R2Q8NFZ6 395 aa17.82■□□□□ 0.44
COL1A1-202ENST00000463440 LRRC15Q8TF66 581 aa17.82■□□□□ 0.44
COL1A1-202ENST00000463440 AUTS2Q8WXX7 1259 aa17.82■□□□□ 0.44
COL1A1-202ENST00000463440 CASP10Q92851 521 aa17.82■□□□□ 0.44
COL1A1-202ENST00000463440 TCHPQ9BT92 498 aa17.82■□□□□ 0.44
COL1A1-202ENST00000463440 CCDC94Q9BW85 323 aaPredicted RBP17.82■□□□□ 0.44
COL1A1-202ENST00000463440 VN1R3Q9BXE9 311 aa17.82■□□□□ 0.44
COL1A1-202ENST00000463440 MARCH5Q9NX47 278 aa17.82■□□□□ 0.44
COL1A1-202ENST00000463440 PRKAG3Q9UGI9 489 aa17.82■□□□□ 0.44
COL1A1-202ENST00000463440 CLASP2O75122 1294 aaKnown RBP17.81■□□□□ 0.44
COL1A1-202ENST00000463440 TBCAO75347 108 aaKnown RBP17.81■□□□□ 0.44
COL1A1-202ENST00000463440 SOD2P04179 222 aa17.81■□□□□ 0.44
COL1A1-202ENST00000463440 ZSCAN22P10073 491 aaPredicted RBP17.81■□□□□ 0.44
COL1A1-202ENST00000463440 MAPTP10636 758 aaKnown RBP17.81■□□□□ 0.44
COL1A1-202ENST00000463440 SCP2P22307 547 aa17.81■□□□□ 0.44
COL1A1-202ENST00000463440 YARSP54577 528 aaKnown RBP17.81■□□□□ 0.44
COL1A1-202ENST00000463440 RBM10P98175 930 aaKnown RBP17.81■□□□□ 0.44
COL1A1-202ENST00000463440 TUSC3Q13454 348 aa17.81■□□□□ 0.44
COL1A1-202ENST00000463440 KCNC3Q14003 757 aa17.81■□□□□ 0.44
COL1A1-202ENST00000463440 SMAD2Q15796 467 aaKnown RBP17.81■□□□□ 0.44
COL1A1-202ENST00000463440 RRAGBQ5VZM2 374 aa17.81■□□□□ 0.44
COL1A1-202ENST00000463440 MYCT1Q8N699 235 aa17.81■□□□□ 0.44
COL1A1-202ENST00000463440 SMRP1Q8NCR6 262 aa17.81■□□□□ 0.44
COL1A1-202ENST00000463440 HERC2P3Q9BVR0 1158 aa17.81■□□□□ 0.44
COL1A1-202ENST00000463440 CDT1Q9H211 546 aa17.81■□□□□ 0.44
COL1A1-202ENST00000463440 PARVGQ9HBI0 331 aa17.81■□□□□ 0.44
COL1A1-202ENST00000463440 PTPRHQ9HD43 1115 aa17.81■□□□□ 0.44
COL1A1-202ENST00000463440 MRPL17Q9NRX2 175 aaKnown RBP17.81■□□□□ 0.44
COL1A1-202ENST00000463440 SSX2IPQ9Y2D8 614 aa17.81■□□□□ 0.44
COL1A1-202ENST00000463440 PTGESO14684 152 aa17.8■□□□□ 0.44
COL1A1-202ENST00000463440 SPTLC2O15270 562 aa17.8■□□□□ 0.44
COL1A1-202ENST00000463440 URODP06132 367 aa17.8■□□□□ 0.44
COL1A1-202ENST00000463440 MCF2P10911 925 aa17.8■□□□□ 0.44
COL1A1-202ENST00000463440 GRM5P41594 1212 aa17.8■□□□□ 0.44
COL1A1-202ENST00000463440 ZNF131P52739 623 aa17.8■□□□□ 0.44
COL1A1-202ENST00000463440 NCKAP1LP55160 1127 aa17.8■□□□□ 0.44
COL1A1-202ENST00000463440 PTPN14Q15678 1187 aa17.8■□□□□ 0.44
COL1A1-202ENST00000463440 FOXD4L5Q5VV16 416 aaPredicted RBP17.8■□□□□ 0.44
COL1A1-202ENST00000463440 ANKRD54Q6NXT1 300 aa17.8■□□□□ 0.44
COL1A1-202ENST00000463440 MPZL3Q6UWV2 235 aa17.8■□□□□ 0.44
COL1A1-202ENST00000463440 CCDC73Q6ZRK6 1079 aa17.8■□□□□ 0.44
COL1A1-202ENST00000463440 HAUS6Q7Z4H7 955 aa17.8■□□□□ 0.44
COL1A1-202ENST00000463440 ZBTB33Q86T24 672 aa17.8■□□□□ 0.44
COL1A1-202ENST00000463440 SPRYD3Q8NCJ5 442 aa17.8■□□□□ 0.44
COL1A1-202ENST00000463440 LINC00301Q8NCQ3 95 aa17.8■□□□□ 0.44
COL1A1-202ENST00000463440 FOXD4L4Q8WXT5 416 aaPredicted RBP17.8■□□□□ 0.44
COL1A1-202ENST00000463440 EMILIN2Q9BXX0 1053 aa17.8■□□□□ 0.44
COL1A1-202ENST00000463440 ZHX3Q9H4I2 956 aa17.8■□□□□ 0.44
COL1A1-202ENST00000463440 TOPORSQ9NS56 1045 aaPredicted RBP17.8■□□□□ 0.44
COL1A1-202ENST00000463440 TFIP11Q9UBB9 837 aaKnown RBP17.8■□□□□ 0.44
COL1A1-202ENST00000463440 HCFC2Q9Y5Z7 792 aa17.8■□□□□ 0.44
COL1A1-202ENST00000463440 TOM1L1O75674 476 aa17.79■□□□□ 0.44
COL1A1-202ENST00000463440 YEATS4O95619 227 aa17.79■□□□□ 0.44
COL1A1-202ENST00000463440 BRD1O95696 1058 aa17.79■□□□□ 0.44
COL1A1-202ENST00000463440 F13A1P00488 732 aa17.79■□□□□ 0.44
COL1A1-202ENST00000463440 HOXB8P17481 243 aaPredicted RBP17.79■□□□□ 0.44
COL1A1-202ENST00000463440 PROZP22891 400 aa17.79■□□□□ 0.44
COL1A1-202ENST00000463440 SSTR3P32745 418 aaPredicted RBP17.79■□□□□ 0.44
COL1A1-202ENST00000463440 ABCD1P33897 745 aa17.79■□□□□ 0.44
COL1A1-202ENST00000463440 HSP90AA2PQ14568 343 aaPredicted RBP17.79■□□□□ 0.44
COL1A1-202ENST00000463440 ZPBP2Q6X784 338 aa17.79■□□□□ 0.44
COL1A1-202ENST00000463440 PPFIBP1Q86W92 1011 aa17.79■□□□□ 0.44
COL1A1-202ENST00000463440 ADHFE1Q8IWW8 467 aa17.79■□□□□ 0.44
COL1A1-202ENST00000463440 GJD3Q8N144 294 aa17.79■□□□□ 0.44
COL1A1-202ENST00000463440 KCNN1Q92952 543 aa17.79■□□□□ 0.44
COL1A1-202ENST00000463440 BICD1Q96G01 975 aa17.79■□□□□ 0.44
COL1A1-202ENST00000463440 POP1Q99575 1024 aaKnown RBP17.79■□□□□ 0.44
COL1A1-202ENST00000463440 ADAM28Q9UKQ2 775 aa17.79■□□□□ 0.44
COL1A1-202ENST00000463440 MYH15Q9Y2K3 1946 aa17.78■□□□□ 0.44
COL1A1-202ENST00000463440 CASTOR2A6NHX0 329 aa17.78■□□□□ 0.44
COL1A1-202ENST00000463440 K7ENM7 598 aa17.78■□□□□ 0.44
COL1A1-202ENST00000463440 TRAK2O60296 914 aa17.78■□□□□ 0.44
COL1A1-202ENST00000463440 PPP6R2O75170 966 aa17.78■□□□□ 0.44
COL1A1-202ENST00000463440 TADA2AO75478 443 aa17.78■□□□□ 0.44
COL1A1-202ENST00000463440 GLUD2P49448 558 aa17.78■□□□□ 0.44
COL1A1-202ENST00000463440 OSTNP61366 133 aa17.78■□□□□ 0.44
COL1A1-202ENST00000463440 NOLC1Q14978 699 aaKnown RBP eCLIP17.78■□□□□ 0.44
COL1A1-202ENST00000463440 TPRNQ4KMQ1 711 aa17.78■□□□□ 0.44
COL1A1-202ENST00000463440 KIAA1841Q6NSI8 718 aa17.78■□□□□ 0.44
COL1A1-202ENST00000463440 FUT10Q6P4F1 479 aa17.78■□□□□ 0.44
COL1A1-202ENST00000463440 SV2BQ7L1I2 683 aa17.78■□□□□ 0.44
COL1A1-202ENST00000463440 RNF168Q8IYW5 571 aaPredicted RBP17.78■□□□□ 0.44
COL1A1-202ENST00000463440 CEP120Q8N960 986 aa17.78■□□□□ 0.44
COL1A1-202ENST00000463440 ACAP3Q96P50 834 aa17.78■□□□□ 0.44
COL1A1-202ENST00000463440 ANKFY1Q9P2R3 1169 aa17.78■□□□□ 0.44
COL1A1-202ENST00000463440 USP15Q9Y4E8 981 aaPredicted RBP17.78■□□□□ 0.44
COL1A1-202ENST00000463440 F8W810 466 aa17.77■□□□□ 0.44
COL1A1-202ENST00000463440 C2CD2LO14523 706 aa17.77■□□□□ 0.44
COL1A1-202ENST00000463440 ABLIM1O14639 778 aa17.77■□□□□ 0.44
COL1A1-202ENST00000463440 CLDN3O15551 220 aa17.77■□□□□ 0.44
COL1A1-202ENST00000463440 LILRB3O75022 631 aa17.77■□□□□ 0.44
COL1A1-202ENST00000463440 EFEMP2O95967 443 aa17.77■□□□□ 0.44
COL1A1-202ENST00000463440 HARSP12081 509 aaKnown RBP17.77■□□□□ 0.44
COL1A1-202ENST00000463440 KLRC2P26717 231 aa17.77■□□□□ 0.44
COL1A1-202ENST00000463440 STAT6P42226 847 aa17.77■□□□□ 0.44
COL1A1-202ENST00000463440 MATR3P43243 847 aaKnown RBP eCLIP17.77■□□□□ 0.44
COL1A1-202ENST00000463440 ZP2Q05996 745 aa17.77■□□□□ 0.44
COL1A1-202ENST00000463440 USP41Q3LFD5 358 aa17.77■□□□□ 0.44
COL1A1-202ENST00000463440 ATL3Q6DD88 541 aa17.77■□□□□ 0.44
COL1A1-202ENST00000463440 SYCE2Q6PIF2 218 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms