RNA–Protein interactions for RNA: ENST00000463423.5

CTPS1-204, Transcript of CTP synthase 1, humanhuman

TSL 5

Gene CTPS1, Length 457 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-204ENST00000463423 RNF19AQ9NV58 838 aa6.64□□□□□ -1.35
CTPS1-204ENST00000463423 TYW1Q9NV66 732 aaKnown RBP6.64□□□□□ -1.35
CTPS1-204ENST00000463423 CPSF3Q9UKF6 684 aaKnown RBP6.64□□□□□ -1.35
CTPS1-204ENST00000463423 MAN1B1Q9UKM7 699 aa6.64□□□□□ -1.35
CTPS1-204ENST00000463423 COLQQ9Y215 455 aaPredicted RBP6.64□□□□□ -1.35
CTPS1-204ENST00000463423 IPPQ9Y573 584 aa6.64□□□□□ -1.35
CTPS1-204ENST00000463423 PCDHA11Q9Y5I1 949 aa6.64□□□□□ -1.35
CTPS1-204ENST00000463423 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.64□□□□□ -1.35
CTPS1-204ENST00000463423 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.63□□□□□ -1.35
CTPS1-204ENST00000463423 TTC26A0AVF1 554 aa6.63□□□□□ -1.35
CTPS1-204ENST00000463423 CALUO43852 315 aaPredicted RBP6.63□□□□□ -1.35
CTPS1-204ENST00000463423 NPTXRO95502 500 aa6.63□□□□□ -1.35
CTPS1-204ENST00000463423 KCNE1P15382 129 aa6.63□□□□□ -1.35
CTPS1-204ENST00000463423 CCNE1P24864 410 aa6.63□□□□□ -1.35
CTPS1-204ENST00000463423 ERCC5P28715 1186 aaPredicted RBP6.63□□□□□ -1.35
CTPS1-204ENST00000463423 NLRP12P59046 1061 aa6.63□□□□□ -1.35
CTPS1-204ENST00000463423 CLDN10P78369 228 aa6.63□□□□□ -1.35
CTPS1-204ENST00000463423 LRRC63Q05C16 580 aa6.63□□□□□ -1.35
CTPS1-204ENST00000463423 STIM1Q13586 685 aa6.63□□□□□ -1.35
CTPS1-204ENST00000463423 NOLC1Q14978 699 aaKnown RBP eCLIP6.63□□□□□ -1.35
CTPS1-204ENST00000463423 NFKBIBQ15653 356 aa6.63□□□□□ -1.35
CTPS1-204ENST00000463423 SLC10A6Q3KNW5 377 aa6.63□□□□□ -1.35
CTPS1-204ENST00000463423 MAMSTRQ6ZN01 415 aa6.63□□□□□ -1.35
CTPS1-204ENST00000463423 NT5DC4Q86YG4 428 aa6.63□□□□□ -1.35
CTPS1-204ENST00000463423 CMTR2Q8IYT2 770 aaKnown RBP6.63□□□□□ -1.35
CTPS1-204ENST00000463423 SYCP3Q8IZU3 236 aa6.63□□□□□ -1.35
CTPS1-204ENST00000463423 ERCC4Q92889 916 aaPredicted RBP6.63□□□□□ -1.35
CTPS1-204ENST00000463423 CLP1Q92989 425 aaKnown RBP6.63□□□□□ -1.35
CTPS1-204ENST00000463423 BICD1Q96G01 975 aa6.63□□□□□ -1.35
CTPS1-204ENST00000463423 MFSD14AQ96MC6 490 aa6.63□□□□□ -1.35
CTPS1-204ENST00000463423 ACAP3Q96P50 834 aa6.63□□□□□ -1.35
CTPS1-204ENST00000463423 PHF12Q96QT6 1004 aa6.63□□□□□ -1.35
CTPS1-204ENST00000463423 CCDC94Q9BW85 323 aaPredicted RBP6.63□□□□□ -1.35
CTPS1-204ENST00000463423 TRIM6Q9C030 488 aaPredicted RBP6.63□□□□□ -1.35
CTPS1-204ENST00000463423 TMEM117Q9H0C3 514 aa6.63□□□□□ -1.35
CTPS1-204ENST00000463423 TRIOBPQ9H2D6 2365 aa6.63□□□□□ -1.35
CTPS1-204ENST00000463423 SEMA6BQ9H3T3 888 aa6.63□□□□□ -1.35
CTPS1-204ENST00000463423 ASB7Q9H672 318 aa6.63□□□□□ -1.35
CTPS1-204ENST00000463423 AGPAT3Q9NRZ7 376 aa6.63□□□□□ -1.35
CTPS1-204ENST00000463423 TOPORSQ9NS56 1045 aaPredicted RBP6.63□□□□□ -1.35
CTPS1-204ENST00000463423 TMEM63CQ9P1W3 806 aa6.63□□□□□ -1.35
CTPS1-204ENST00000463423 AGO2Q9UKV8 859 aaKnown RBP6.63□□□□□ -1.35
CTPS1-204ENST00000463423 LRFN2Q9ULH4 789 aa6.63□□□□□ -1.35
CTPS1-204ENST00000463423 USP20Q9Y2K6 914 aa6.63□□□□□ -1.35
CTPS1-204ENST00000463423 GDAQ9Y2T3 454 aa6.63□□□□□ -1.35
CTPS1-204ENST00000463423 DERAQ9Y315 318 aa6.63□□□□□ -1.35
CTPS1-204ENST00000463423 ATG2AQ2TAZ0 1938 aa6.62□□□□□ -1.35
CTPS1-204ENST00000463423 TMEM265A0A087WTH1 108 aa6.62□□□□□ -1.35
CTPS1-204ENST00000463423 BICDL2A1A5D9 508 aa6.62□□□□□ -1.35
CTPS1-204ENST00000463423 ARL5CA6NH57 179 aa6.62□□□□□ -1.35
CTPS1-204ENST00000463423 ZNF233A6NK53 670 aa6.62□□□□□ -1.35
CTPS1-204ENST00000463423 MEIS3P2A8K0S8 358 aa6.62□□□□□ -1.35
CTPS1-204ENST00000463423 ZBBXA8MT70 800 aa6.62□□□□□ -1.35
CTPS1-204ENST00000463423 C5orf67F2Z3F1 127 aa6.62□□□□□ -1.35
CTPS1-204ENST00000463423 PSMA7O14818 248 aa6.62□□□□□ -1.35
CTPS1-204ENST00000463423 EXTL3O43909 919 aa6.62□□□□□ -1.35
CTPS1-204ENST00000463423 IL18RAPO95256 599 aa6.62□□□□□ -1.35
CTPS1-204ENST00000463423 LINC00271P0C7V0 271 aa6.62□□□□□ -1.35
CTPS1-204ENST00000463423 PRKCSHP14314 528 aaPredicted RBP6.62□□□□□ -1.35
CTPS1-204ENST00000463423 RPL13P26373 211 aaKnown RBP6.62□□□□□ -1.35
CTPS1-204ENST00000463423 FKBP3Q00688 224 aaKnown RBP6.62□□□□□ -1.35
CTPS1-204ENST00000463423 DSC1Q08554 894 aa6.62□□□□□ -1.35
CTPS1-204ENST00000463423 SURF1Q15526 300 aa6.62□□□□□ -1.35
CTPS1-204ENST00000463423 NAB2Q15742 525 aa6.62□□□□□ -1.35
CTPS1-204ENST00000463423 RAB30Q15771 203 aa6.62□□□□□ -1.35
CTPS1-204ENST00000463423 ZNF568Q3ZCX4 644 aa6.62□□□□□ -1.35
CTPS1-204ENST00000463423 CLLU1OSQ5K130 101 aa6.62□□□□□ -1.35
CTPS1-204ENST00000463423 ANKRD40Q6AI12 368 aa6.62□□□□□ -1.35
CTPS1-204ENST00000463423 FAM109BQ6ICB4 259 aaPredicted RBP6.62□□□□□ -1.35
CTPS1-204ENST00000463423 ARMCX5Q6P1M9 558 aa6.62□□□□□ -1.35
CTPS1-204ENST00000463423 LRRC55Q6ZSA7 311 aa6.62□□□□□ -1.35
CTPS1-204ENST00000463423 HS2ST1Q7LGA3 356 aa6.62□□□□□ -1.35
CTPS1-204ENST00000463423 FILIP1Q7Z7B0 1213 aa6.62□□□□□ -1.35
CTPS1-204ENST00000463423 CDR2LQ86X02 465 aaPredicted RBP6.62□□□□□ -1.35
CTPS1-204ENST00000463423 GPD1LQ8N335 351 aa6.62□□□□□ -1.35
CTPS1-204ENST00000463423 XXYLT1Q8NBI6 393 aa6.62□□□□□ -1.35
CTPS1-204ENST00000463423 POMGNT1Q8WZA1 660 aa6.62□□□□□ -1.35
CTPS1-204ENST00000463423 P2RX5Q93086 422 aa6.62□□□□□ -1.35
CTPS1-204ENST00000463423 SAMD11Q96NU1 681 aa6.62□□□□□ -1.35
CTPS1-204ENST00000463423 CBWD1Q9BRT8 395 aa6.62□□□□□ -1.35
CTPS1-204ENST00000463423 MKNK1Q9BUB5 465 aa6.62□□□□□ -1.35
CTPS1-204ENST00000463423 MSTO1Q9BUK6 570 aa6.62□□□□□ -1.35
CTPS1-204ENST00000463423 MRPL9Q9BYD2 267 aaKnown RBP6.62□□□□□ -1.35
CTPS1-204ENST00000463423 IKZF4Q9H2S9 585 aa6.62□□□□□ -1.35
CTPS1-204ENST00000463423 NXF3Q9H4D5 531 aaKnown RBP6.62□□□□□ -1.35
CTPS1-204ENST00000463423 CWH43Q9H720 699 aa6.62□□□□□ -1.35
CTPS1-204ENST00000463423 RSAD1Q9HA92 442 aa6.62□□□□□ -1.35
CTPS1-204ENST00000463423 SCUBE2Q9NQ36 999 aa6.62□□□□□ -1.35
CTPS1-204ENST00000463423 MIOSQ9NXC5 875 aa6.62□□□□□ -1.35
CTPS1-204ENST00000463423 SNTG2Q9NY99 539 aa6.62□□□□□ -1.35
CTPS1-204ENST00000463423 HSPBP1Q9NZL4 362 aa6.62□□□□□ -1.35
CTPS1-204ENST00000463423 CNTN3Q9P232 1028 aa6.62□□□□□ -1.35
CTPS1-204ENST00000463423 RWDD2AQ9UIY3 292 aa6.62□□□□□ -1.35
CTPS1-204ENST00000463423 HES2Q9Y543 173 aa6.62□□□□□ -1.35
CTPS1-204ENST00000463423 VWA8A3KMH1 1905 aa6.62□□□□□ -1.35
CTPS1-204ENST00000463423 SMIM28A0A1B0GU29 152 aa6.61□□□□□ -1.35
CTPS1-204ENST00000463423 TISP43B9A030 160 aa6.61□□□□□ -1.35
CTPS1-204ENST00000463423 PTGESO14684 152 aa6.61□□□□□ -1.35
CTPS1-204ENST00000463423 IKBKBO14920 756 aa6.61□□□□□ -1.35
CTPS1-204ENST00000463423 CLIC2O15247 247 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms