RNA–Protein interactions for RNA: ENST00000462279.5

ERCC8-204, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 5

Gene ERCC8, Length 3,424 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-204ENST00000462279 CYTH2Q99418 400 aa8.61□□□□□ -1.03
ERCC8-204ENST00000462279 MIPEPQ99797 713 aa8.61□□□□□ -1.03
ERCC8-204ENST00000462279 CCDC77Q9BR77 488 aa8.61□□□□□ -1.03
ERCC8-204ENST00000462279 TMEM165Q9HC07 324 aa8.61□□□□□ -1.03
ERCC8-204ENST00000462279 GALNT8Q9NY28 637 aa8.61□□□□□ -1.03
ERCC8-204ENST00000462279 PCDHA2Q9Y5H9 948 aa8.61□□□□□ -1.03
ERCC8-204ENST00000462279 COL1A1P02452 1464 aaPredicted RBP8.61□□□□□ -1.03
ERCC8-204ENST00000462279 ANKRD62A6NC57 917 aa8.61□□□□□ -1.03
ERCC8-204ENST00000462279 MAGEA13PA6NCF6 341 aa8.61□□□□□ -1.03
ERCC8-204ENST00000462279 USP17L5A8MUK1 530 aa8.61□□□□□ -1.03
ERCC8-204ENST00000462279 RSPH10B2B2RC85 870 aa8.61□□□□□ -1.03
ERCC8-204ENST00000462279 LMNAP02545 664 aaKnown RBP8.61□□□□□ -1.03
ERCC8-204ENST00000462279 RSPH10BP0C881 870 aa8.61□□□□□ -1.03
ERCC8-204ENST00000462279 IL2RBP14784 551 aa8.61□□□□□ -1.03
ERCC8-204ENST00000462279 HSPA6P17066 643 aa8.61□□□□□ -1.03
ERCC8-204ENST00000462279 RFC4P35249 363 aa8.61□□□□□ -1.03
ERCC8-204ENST00000462279 NEK3P51956 506 aa8.61□□□□□ -1.03
ERCC8-204ENST00000462279 ACVR2BQ13705 512 aa8.61□□□□□ -1.03
ERCC8-204ENST00000462279 MEX3CQ5U5Q3 659 aaKnown RBP8.61□□□□□ -1.03
ERCC8-204ENST00000462279 NLRP9Q7RTR0 991 aa8.61□□□□□ -1.03
ERCC8-204ENST00000462279 SLC13A5Q86YT5 568 aaPredicted RBP8.61□□□□□ -1.03
ERCC8-204ENST00000462279 APLFQ8IW19 511 aaPredicted RBP8.61□□□□□ -1.03
ERCC8-204ENST00000462279 MAPKAPK5Q8IW41 473 aa8.61□□□□□ -1.03
ERCC8-204ENST00000462279 ZNF513Q8N8E2 541 aaPredicted RBP8.61□□□□□ -1.03
ERCC8-204ENST00000462279 SLC30A5Q8TAD4 765 aa8.61□□□□□ -1.03
ERCC8-204ENST00000462279 HAS1Q92839 578 aa8.61□□□□□ -1.03
ERCC8-204ENST00000462279 TRAPPC9Q96Q05 1148 aa8.61□□□□□ -1.03
ERCC8-204ENST00000462279 CADM1Q9BY67 442 aaKnown RBP8.61□□□□□ -1.03
ERCC8-204ENST00000462279 ALG13Q9NP73 1137 aaKnown RBP8.61□□□□□ -1.03
ERCC8-204ENST00000462279 GPCPD1Q9NPB8 672 aa8.61□□□□□ -1.03
ERCC8-204ENST00000462279 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.61□□□□□ -1.03
ERCC8-204ENST00000462279 ANAPC5Q9UJX4 755 aa8.61□□□□□ -1.03
ERCC8-204ENST00000462279 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.61□□□□□ -1.03
ERCC8-204ENST00000462279 WASF2Q9Y6W5 498 aa8.61□□□□□ -1.03
ERCC8-204ENST00000462279 CALUO43852 315 aaPredicted RBP8.6□□□□□ -1.03
ERCC8-204ENST00000462279 BAG2O95816 211 aa8.6□□□□□ -1.03
ERCC8-204ENST00000462279 CCNFP41002 786 aa8.6□□□□□ -1.03
ERCC8-204ENST00000462279 CYP2J2P51589 502 aa8.6□□□□□ -1.03
ERCC8-204ENST00000462279 PSMC6P62333 389 aa8.6□□□□□ -1.03
ERCC8-204ENST00000462279 CYP4A11Q02928 519 aa8.6□□□□□ -1.03
ERCC8-204ENST00000462279 DEUP1Q05D60 604 aa8.6□□□□□ -1.03
ERCC8-204ENST00000462279 THOC5Q13769 683 aaKnown RBP8.6□□□□□ -1.03
ERCC8-204ENST00000462279 EAPPQ56P03 285 aaPredicted RBP8.6□□□□□ -1.03
ERCC8-204ENST00000462279 C12orf60Q5U649 245 aa8.6□□□□□ -1.03
ERCC8-204ENST00000462279 VCX3BQ9H321 246 aa8.6□□□□□ -1.03
ERCC8-204ENST00000462279 DNAJC18Q9H819 358 aa8.6□□□□□ -1.03
ERCC8-204ENST00000462279 VCX3AQ9NNX9 186 aa8.6□□□□□ -1.03
ERCC8-204ENST00000462279 DMAP1Q9NPF5 467 aaPredicted RBP8.6□□□□□ -1.03
ERCC8-204ENST00000462279 CCDC87Q9NVE4 849 aa8.6□□□□□ -1.03
ERCC8-204ENST00000462279 NINJ2Q9NZG7 142 aa8.6□□□□□ -1.03
ERCC8-204ENST00000462279 SLAIN2Q9P270 581 aa8.6□□□□□ -1.03
ERCC8-204ENST00000462279 NENFQ9UMX5 172 aa8.6□□□□□ -1.03
ERCC8-204ENST00000462279 NCANO14594 1321 aa8.6□□□□□ -1.03
ERCC8-204ENST00000462279 EXOC1LA0A1B0GW35 172 aa8.6□□□□□ -1.03
ERCC8-204ENST00000462279 MIF4GDA9UHW6 222 aaKnown RBP8.6□□□□□ -1.03
ERCC8-204ENST00000462279 CTNNA2P26232 953 aa8.6□□□□□ -1.03
ERCC8-204ENST00000462279 RPL13P26373 211 aaKnown RBP8.6□□□□□ -1.03
ERCC8-204ENST00000462279 CPA2P48052 419 aa8.6□□□□□ -1.03
ERCC8-204ENST00000462279 SLC34A1Q06495 639 aa8.6□□□□□ -1.03
ERCC8-204ENST00000462279 GIT2Q14161 759 aa8.6□□□□□ -1.03
ERCC8-204ENST00000462279 SPARCL1Q14515 664 aa8.6□□□□□ -1.03
ERCC8-204ENST00000462279 SEPT7Q16181 437 aaKnown RBP8.6□□□□□ -1.03
ERCC8-204ENST00000462279 CNPY1Q3B7I2 92 aa8.6□□□□□ -1.03
ERCC8-204ENST00000462279 ARSHQ5FYA8 562 aa8.6□□□□□ -1.03
ERCC8-204ENST00000462279 PPP4R3CPQ6ZMV5 832 aa8.6□□□□□ -1.03
ERCC8-204ENST00000462279 CYFIP1Q7L576 1253 aa8.6□□□□□ -1.03
ERCC8-204ENST00000462279 WDR60Q8WVS4 1066 aa8.6□□□□□ -1.03
ERCC8-204ENST00000462279 SPZ1Q9BXG8 430 aa8.6□□□□□ -1.03
ERCC8-204ENST00000462279 STARD13Q9Y3M8 1113 aa8.6□□□□□ -1.03
ERCC8-204ENST00000462279 FOXN3O00409 490 aaPredicted RBP8.6□□□□□ -1.03
ERCC8-204ENST00000462279 EXOC3O60645 756 aa8.6□□□□□ -1.03
ERCC8-204ENST00000462279 PFDN1O60925 122 aa8.6□□□□□ -1.03
ERCC8-204ENST00000462279 PIAS1O75925 651 aa8.6□□□□□ -1.03
ERCC8-204ENST00000462279 ATF2P15336 505 aa8.6□□□□□ -1.03
ERCC8-204ENST00000462279 RPA3P35244 121 aaPredicted RBP8.6□□□□□ -1.03
ERCC8-204ENST00000462279 HOXD13P35453 343 aa8.6□□□□□ -1.03
ERCC8-204ENST00000462279 PPP2R5CQ13362 524 aa8.6□□□□□ -1.03
ERCC8-204ENST00000462279 CLUL1Q15846 466 aa8.6□□□□□ -1.03
ERCC8-204ENST00000462279 LRRC36Q1X8D7 754 aa8.6□□□□□ -1.03
ERCC8-204ENST00000462279 RHOT2Q8IXI1 618 aa8.6□□□□□ -1.03
ERCC8-204ENST00000462279 FAM186BQ8IYM0 893 aa8.6□□□□□ -1.03
ERCC8-204ENST00000462279 IFT43Q96FT9 208 aa8.6□□□□□ -1.03
ERCC8-204ENST00000462279 TTC1Q99614 292 aa8.6□□□□□ -1.03
ERCC8-204ENST00000462279 REEP2Q9BRK0 252 aa8.6□□□□□ -1.03
ERCC8-204ENST00000462279 ACP6Q9NPH0 428 aa8.6□□□□□ -1.03
ERCC8-204ENST00000462279 CHST7Q9NS84 486 aa8.6□□□□□ -1.03
ERCC8-204ENST00000462279 STRCQ7RTU9 1775 aa8.59□□□□□ -1.03
ERCC8-204ENST00000462279 EDIL3O43854 480 aa8.59□□□□□ -1.03
ERCC8-204ENST00000462279 OPHN1O60890 802 aa8.59□□□□□ -1.03
ERCC8-204ENST00000462279 EYA4O95677 639 aa8.59□□□□□ -1.03
ERCC8-204ENST00000462279 CYP19A1P11511 503 aaPredicted RBP8.59□□□□□ -1.03
ERCC8-204ENST00000462279 CLNKQ7Z7G1 428 aa8.59□□□□□ -1.03
ERCC8-204ENST00000462279 PHLDB2Q86SQ0 1253 aa8.59□□□□□ -1.03
ERCC8-204ENST00000462279 KBTBD2Q8IY47 623 aa8.59□□□□□ -1.03
ERCC8-204ENST00000462279 ZNF34Q8IZ26 560 aa8.59□□□□□ -1.03
ERCC8-204ENST00000462279 SLC4A9Q96Q91 983 aa8.59□□□□□ -1.03
ERCC8-204ENST00000462279 EYA3Q99504 573 aa8.59□□□□□ -1.03
ERCC8-204ENST00000462279 ZNF184Q99676 751 aaPredicted RBP8.59□□□□□ -1.03
ERCC8-204ENST00000462279 LZTS2Q9BRK4 669 aa8.59□□□□□ -1.03
ERCC8-204ENST00000462279 MXD3Q9BW11 206 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms