RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.04■□□□□ 0.32
APP-211ENST00000462267 EXOC8Q8IYI6 725 aa17.04■□□□□ 0.32
APP-211ENST00000462267 PSPC1Q8WXF1 523 aaKnown RBP17.04■□□□□ 0.32
APP-211ENST00000462267 SLC7A3Q8WY07 619 aa17.04■□□□□ 0.32
APP-211ENST00000462267 CCDC136Q96JN2 1154 aa17.04■□□□□ 0.32
APP-211ENST00000462267 CLSTN3Q9BQT9 956 aa17.04■□□□□ 0.32
APP-211ENST00000462267 EIF2AQ9BY44 585 aaKnown RBP17.04■□□□□ 0.32
APP-211ENST00000462267 FRYQ5TBA9 3013 aa17.03■□□□□ 0.32
APP-211ENST00000462267 SLC27A2O14975 620 aa17.03■□□□□ 0.32
APP-211ENST00000462267 ERLIN2O94905 339 aa17.03■□□□□ 0.32
APP-211ENST00000462267 CXCL12P48061 93 aa17.03■□□□□ 0.32
APP-211ENST00000462267 NOTUMQ6P988 496 aa17.03■□□□□ 0.32
APP-211ENST00000462267 RTL10Q7L3V2 364 aa17.03■□□□□ 0.32
APP-211ENST00000462267 HACE1Q8IYU2 909 aa17.03■□□□□ 0.32
APP-211ENST00000462267 PRPF31Q8WWY3 499 aaKnown RBP17.03■□□□□ 0.32
APP-211ENST00000462267 PIK3R5Q8WYR1 880 aa17.03■□□□□ 0.32
APP-211ENST00000462267 ELSPBP1Q96BH3 223 aa17.03■□□□□ 0.32
APP-211ENST00000462267 TTPALQ9BTX7 342 aa17.03■□□□□ 0.32
APP-211ENST00000462267 PLA2G2FQ9BZM2 168 aa17.03■□□□□ 0.32
APP-211ENST00000462267 MRPS23Q9Y3D9 190 aaKnown RBP17.03■□□□□ 0.32
APP-211ENST00000462267 HES2Q9Y543 173 aa17.03■□□□□ 0.32
APP-211ENST00000462267 TM4SF5O14894 197 aa17.02■□□□□ 0.32
APP-211ENST00000462267 ASAP2O43150 1006 aa17.02■□□□□ 0.32
APP-211ENST00000462267 HRO43593 1189 aa17.02■□□□□ 0.32
APP-211ENST00000462267 HOXB3P14651 431 aaPredicted RBP17.02■□□□□ 0.32
APP-211ENST00000462267 PSMC5P62195 406 aa17.02■□□□□ 0.32
APP-211ENST00000462267 NCBP1Q09161 790 aaKnown RBP17.02■□□□□ 0.32
APP-211ENST00000462267 LAMTOR4Q0VGL1 99 aa17.02■□□□□ 0.32
APP-211ENST00000462267 GRIK3Q13003 919 aa17.02■□□□□ 0.32
APP-211ENST00000462267 DIEXFQ68CQ4 756 aaKnown RBP17.02■□□□□ 0.32
APP-211ENST00000462267 B3GNT9Q6UX72 402 aa17.02■□□□□ 0.32
APP-211ENST00000462267 GSTCDQ8NEC7 633 aa17.02■□□□□ 0.32
APP-211ENST00000462267 LNX1Q8TBB1 728 aaPredicted RBP17.02■□□□□ 0.32
APP-211ENST00000462267 SLC7A14Q8TBB6 771 aa17.02■□□□□ 0.32
APP-211ENST00000462267 BICD2Q8TD16 824 aa17.02■□□□□ 0.32
APP-211ENST00000462267 GJA10Q969M2 543 aa17.02■□□□□ 0.32
APP-211ENST00000462267 CSRNP2Q9H175 543 aa17.02■□□□□ 0.32
APP-211ENST00000462267 LMAN1LQ9HAT1 526 aa17.02■□□□□ 0.32
APP-211ENST00000462267 HCFC1R1Q9NWW0 138 aa17.02■□□□□ 0.32
APP-211ENST00000462267 DNMT3BQ9UBC3 853 aaKnown RBP17.02■□□□□ 0.32
APP-211ENST00000462267 BRPF3Q9ULD4 1205 aa17.02■□□□□ 0.32
APP-211ENST00000462267 PPME1Q9Y570 386 aa17.02■□□□□ 0.32
APP-211ENST00000462267 GOLGA8AA7E2F4 631 aa17.01■□□□□ 0.31
APP-211ENST00000462267 GOLGA8BA8MQT2 603 aa17.01■□□□□ 0.31
APP-211ENST00000462267 EDIL3O43854 480 aa17.01■□□□□ 0.31
APP-211ENST00000462267 CDC27P30260 824 aa17.01■□□□□ 0.31
APP-211ENST00000462267 HSP90AA2PQ14568 343 aaPredicted RBP17.01■□□□□ 0.31
APP-211ENST00000462267 PSMD5Q16401 504 aa17.01■□□□□ 0.31
APP-211ENST00000462267 AASDHQ4L235 1098 aaPredicted RBP17.01■□□□□ 0.31
APP-211ENST00000462267 AXDND1Q5T1B0 1012 aaPredicted RBP17.01■□□□□ 0.31
APP-211ENST00000462267 TANGO2Q6ICL3 276 aa17.01■□□□□ 0.31
APP-211ENST00000462267 PDXDC1Q6P996 788 aa17.01■□□□□ 0.31
APP-211ENST00000462267 RNF149Q8NC42 400 aa17.01■□□□□ 0.31
APP-211ENST00000462267 ING5Q8WYH8 240 aa17.01■□□□□ 0.31
APP-211ENST00000462267 TMEM143Q96AN5 459 aa17.01■□□□□ 0.31
APP-211ENST00000462267 MCRS1Q96EZ8 462 aa17.01■□□□□ 0.31
APP-211ENST00000462267 APOL6Q9BWW8 343 aa17.01■□□□□ 0.31
APP-211ENST00000462267 BRD9Q9H8M2 597 aa17.01■□□□□ 0.31
APP-211ENST00000462267 RALGAPA1Q6GYQ0 2036 aa17.01■□□□□ 0.31
APP-211ENST00000462267 ZMYM2Q9UBW7 1377 aa17.01■□□□□ 0.31
APP-211ENST00000462267 TSPAN1O60635 241 aa17■□□□□ 0.31
APP-211ENST00000462267 RCAN1P53805 252 aa17■□□□□ 0.31
APP-211ENST00000462267 SATB1Q01826 763 aa17■□□□□ 0.31
APP-211ENST00000462267 FAM171A1Q5VUB5 890 aa17■□□□□ 0.31
APP-211ENST00000462267 CREB3L3Q68CJ9 461 aa17■□□□□ 0.31
APP-211ENST00000462267 PLA2G4FQ68DD2 849 aa17■□□□□ 0.31
APP-211ENST00000462267 LONP2Q86WA8 852 aa17■□□□□ 0.31
APP-211ENST00000462267 TCP11Q8WWU5 503 aa17■□□□□ 0.31
APP-211ENST00000462267 FAM3CQ92520 227 aa17■□□□□ 0.31
APP-211ENST00000462267 RABGGTAQ92696 567 aa17■□□□□ 0.31
APP-211ENST00000462267 IRF7Q92985 503 aa17■□□□□ 0.31
APP-211ENST00000462267 TRIM6Q9C030 488 aaPredicted RBP17■□□□□ 0.31
APP-211ENST00000462267 DHX33Q9H6R0 707 aaKnown RBP17■□□□□ 0.31
APP-211ENST00000462267 TRPV5Q9NQA5 729 aa17■□□□□ 0.31
APP-211ENST00000462267 AVENQ9NQS1 362 aaPredicted RBP17■□□□□ 0.31
APP-211ENST00000462267 ZZEF1O43149 2961 aa17■□□□□ 0.31
APP-211ENST00000462267 TDRD15B5MCY1 1934 aaKnown RBP17■□□□□ 0.31
APP-211ENST00000462267 CHURC1-FNTBB4DL54 471 aa16.99■□□□□ 0.31
APP-211ENST00000462267 DKC1O60832 514 aaKnown RBP eCLIP16.99■□□□□ 0.311e-7■■■■□ 19.3
APP-211ENST00000462267 PAPSS2O95340 614 aaPredicted RBP16.99■□□□□ 0.31
APP-211ENST00000462267 RFC5P40937 340 aa16.99■□□□□ 0.31
APP-211ENST00000462267 FNTBP49356 437 aa16.99■□□□□ 0.31
APP-211ENST00000462267 NPEPPSP55786 919 aa16.99■□□□□ 0.31
APP-211ENST00000462267 ELAVL2Q12926 359 aaKnown RBP16.99■□□□□ 0.31
APP-211ENST00000462267 RAB33AQ14088 237 aa16.99■□□□□ 0.31
APP-211ENST00000462267 NECTIN1Q15223 517 aa16.99■□□□□ 0.31
APP-211ENST00000462267 Q4G0T1 1027 aa16.99■□□□□ 0.31
APP-211ENST00000462267 FERMT3Q86UX7 667 aa16.99■□□□□ 0.31
APP-211ENST00000462267 CEP57Q86XR8 500 aa16.99■□□□□ 0.31
APP-211ENST00000462267 SPEM1Q8N4L4 309 aa16.99■□□□□ 0.31
APP-211ENST00000462267 C12orf50Q8NA57 414 aaPredicted RBP16.99■□□□□ 0.31
APP-211ENST00000462267 CEP170P1Q96L14 293 aa16.99■□□□□ 0.31
APP-211ENST00000462267 TRMT61BQ9BVS5 477 aaKnown RBP16.99■□□□□ 0.31
APP-211ENST00000462267 LSG1Q9H089 658 aaKnown RBP16.99■□□□□ 0.31
APP-211ENST00000462267 ZMIZ1Q9ULJ6 1067 aa16.99■□□□□ 0.31
APP-211ENST00000462267 NOTCH4Q99466 2003 aa16.98■□□□□ 0.31
APP-211ENST00000462267 CCDC196A0A1B0GTZ2 297 aa16.98■□□□□ 0.31
APP-211ENST00000462267 ADAM12O43184 909 aa16.98■□□□□ 0.31
APP-211ENST00000462267 RHOP08100 348 aa16.98■□□□□ 0.31
APP-211ENST00000462267 SRSF5Q13243 272 aaKnown RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms