RNA–Protein interactions for RNA: ENST00000461624.1

SPTA1-202, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 2

Gene SPTA1, Length 930 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-202ENST00000461624 CTNNA3Q9UI47 895 aa6.38□□□□□ -1.39
SPTA1-202ENST00000461624 TMEM59LQ9UK28 342 aa6.38□□□□□ -1.39
SPTA1-202ENST00000461624 RALYQ9UKM9 306 aaKnown RBP6.38□□□□□ -1.39
SPTA1-202ENST00000461624 TMX2Q9Y320 296 aa6.38□□□□□ -1.39
SPTA1-202ENST00000461624 LAMA5O15230 3695 aa6.38□□□□□ -1.39
SPTA1-202ENST00000461624 LAMA1P25391 3075 aa6.37□□□□□ -1.39
SPTA1-202ENST00000461624 NFIBO00712 420 aa6.37□□□□□ -1.39
SPTA1-202ENST00000461624 ATP2A1O14983 1001 aa6.37□□□□□ -1.39
SPTA1-202ENST00000461624 NCK2O43639 380 aa6.37□□□□□ -1.39
SPTA1-202ENST00000461624 LINC00271P0C7V0 271 aa6.37□□□□□ -1.39
SPTA1-202ENST00000461624 SUPT20HL2P0C7V6 817 aa6.37□□□□□ -1.39
SPTA1-202ENST00000461624 PLCG1P19174 1290 aa6.37□□□□□ -1.39
SPTA1-202ENST00000461624 CFPP27918 469 aa6.37□□□□□ -1.39
SPTA1-202ENST00000461624 TNFAIP2Q03169 654 aa6.37□□□□□ -1.39
SPTA1-202ENST00000461624 RBL2Q08999 1139 aa6.37□□□□□ -1.39
SPTA1-202ENST00000461624 PUM1Q14671 1186 aaKnown RBP eCLIP6.37□□□□□ -1.39
SPTA1-202ENST00000461624 PTPROQ16827 1216 aa6.37□□□□□ -1.39
SPTA1-202ENST00000461624 ST3GAL2Q16842 350 aa6.37□□□□□ -1.39
SPTA1-202ENST00000461624 LRRFIP1Q32MZ4 808 aaKnown RBP6.37□□□□□ -1.39
SPTA1-202ENST00000461624 MCTP2Q6DN12 878 aa6.37□□□□□ -1.39
SPTA1-202ENST00000461624 TTC6Q86TZ1 520 aa6.37□□□□□ -1.39
SPTA1-202ENST00000461624 C1QL4Q86Z23 238 aa6.37□□□□□ -1.39
SPTA1-202ENST00000461624 LRRC56Q8IYG6 542 aaPredicted RBP6.37□□□□□ -1.39
SPTA1-202ENST00000461624 FAM133AQ8N9E0 248 aa6.37□□□□□ -1.39
SPTA1-202ENST00000461624 ABHD4Q8TB40 342 aa6.37□□□□□ -1.39
SPTA1-202ENST00000461624 NKD1Q969G9 470 aa6.37□□□□□ -1.39
SPTA1-202ENST00000461624 NOL10Q9BSC4 688 aaKnown RBP6.37□□□□□ -1.39
SPTA1-202ENST00000461624 TEX13BQ9BXU2 312 aa6.37□□□□□ -1.39
SPTA1-202ENST00000461624 FTOQ9C0B1 505 aaKnown RBP eCLIP6.37□□□□□ -1.39
SPTA1-202ENST00000461624 TGIF2Q9GZN2 237 aa6.37□□□□□ -1.39
SPTA1-202ENST00000461624 TRIT1Q9H3H1 467 aaKnown RBP6.37□□□□□ -1.39
SPTA1-202ENST00000461624 CCSER2Q9H7U1 834 aa6.37□□□□□ -1.39
SPTA1-202ENST00000461624 CABP5Q9NP86 173 aa6.37□□□□□ -1.39
SPTA1-202ENST00000461624 Q9Y3F1 56 aa6.37□□□□□ -1.39
SPTA1-202ENST00000461624 PCDHGB7Q9Y5F8 929 aa6.37□□□□□ -1.39
SPTA1-202ENST00000461624 MYO18BQ8IUG5 2567 aa6.37□□□□□ -1.39
SPTA1-202ENST00000461624 NBNO60934 754 aa6.36□□□□□ -1.39
SPTA1-202ENST00000461624 ESR1P03372 595 aa6.36□□□□□ -1.39
SPTA1-202ENST00000461624 ICAM3P32942 547 aa6.36□□□□□ -1.39
SPTA1-202ENST00000461624 GTF2F1P35269 517 aaKnown RBP eCLIP6.36□□□□□ -1.39
SPTA1-202ENST00000461624 ZNF165P49910 485 aa6.36□□□□□ -1.39
SPTA1-202ENST00000461624 YARSP54577 528 aaKnown RBP6.36□□□□□ -1.39
SPTA1-202ENST00000461624 PURAQ00577 322 aaKnown RBP6.36□□□□□ -1.39
SPTA1-202ENST00000461624 CNTN2Q02246 1040 aa6.36□□□□□ -1.39
SPTA1-202ENST00000461624 TFCP2Q12800 502 aa6.36□□□□□ -1.39
SPTA1-202ENST00000461624 SNRNP48Q6IEG0 339 aaKnown RBP6.36□□□□□ -1.39
SPTA1-202ENST00000461624 TAPT1Q6NXT6 567 aa6.36□□□□□ -1.39
SPTA1-202ENST00000461624 CNKSR3Q6P9H4 555 aa6.36□□□□□ -1.39
SPTA1-202ENST00000461624 MCATQ8IVS2 390 aaKnown RBP6.36□□□□□ -1.39
SPTA1-202ENST00000461624 SMRP1Q8NCR6 262 aa6.36□□□□□ -1.39
SPTA1-202ENST00000461624 DNAJB8Q8NHS0 232 aa6.36□□□□□ -1.39
SPTA1-202ENST00000461624 DHX38Q92620 1227 aaKnown RBP6.36□□□□□ -1.39
SPTA1-202ENST00000461624 DPH2Q9BQC3 489 aaPredicted RBP6.36□□□□□ -1.39
SPTA1-202ENST00000461624 EPB41L4BQ9H329 900 aa6.36□□□□□ -1.39
SPTA1-202ENST00000461624 PDGFCQ9NRA1 345 aa6.36□□□□□ -1.39
SPTA1-202ENST00000461624 CLEC1BQ9P126 229 aa6.36□□□□□ -1.39
SPTA1-202ENST00000461624 LRP2BPQ9P2M1 347 aa6.36□□□□□ -1.39
SPTA1-202ENST00000461624 CD207Q9UJ71 328 aa6.36□□□□□ -1.39
SPTA1-202ENST00000461624 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.36□□□□□ -1.39
SPTA1-202ENST00000461624 INSL6Q9Y581 213 aa6.36□□□□□ -1.39
SPTA1-202ENST00000461624 DDX49Q9Y6V7 483 aaKnown RBP6.36□□□□□ -1.39
SPTA1-202ENST00000461624 ABHD14A-ACY1A0A1B0GW23 586 aa6.35□□□□□ -1.39
SPTA1-202ENST00000461624 LINC01565O15544 149 aa6.35□□□□□ -1.39
SPTA1-202ENST00000461624 HPXP02790 462 aa6.35□□□□□ -1.39
SPTA1-202ENST00000461624 KRT1P04264 644 aa6.35□□□□□ -1.39
SPTA1-202ENST00000461624 ARP10275 920 aa6.35□□□□□ -1.39
SPTA1-202ENST00000461624 ERCC5P28715 1186 aaPredicted RBP6.35□□□□□ -1.39
SPTA1-202ENST00000461624 MCM4P33991 863 aa6.35□□□□□ -1.39
SPTA1-202ENST00000461624 ADAM15Q13444 863 aa6.35□□□□□ -1.39
SPTA1-202ENST00000461624 GPM6BQ13491 265 aa6.35□□□□□ -1.39
SPTA1-202ENST00000461624 BFSP2Q13515 415 aa6.35□□□□□ -1.39
SPTA1-202ENST00000461624 ACAP1Q15027 740 aa6.35□□□□□ -1.39
SPTA1-202ENST00000461624 PTPN21Q16825 1174 aa6.35□□□□□ -1.39
SPTA1-202ENST00000461624 NFRKBQ6P4R8 1299 aa6.35□□□□□ -1.39
SPTA1-202ENST00000461624 EP400NLQ6ZTU2 488 aa6.35□□□□□ -1.39
SPTA1-202ENST00000461624 TMEM179Q6ZVK1 233 aa6.35□□□□□ -1.39
SPTA1-202ENST00000461624 AFAP1L1Q8TED9 768 aa6.35□□□□□ -1.39
SPTA1-202ENST00000461624 PPP1R13LQ8WUF5 828 aa6.35□□□□□ -1.39
SPTA1-202ENST00000461624 DDX11Q96FC9 970 aa6.35□□□□□ -1.39
SPTA1-202ENST00000461624 Q96M66 194 aa6.35□□□□□ -1.39
SPTA1-202ENST00000461624 RIPOR3Q96MK2 946 aa6.35□□□□□ -1.39
SPTA1-202ENST00000461624 SAMD11Q96NU1 681 aa6.35□□□□□ -1.39
SPTA1-202ENST00000461624 DIRC2Q96SL1 478 aa6.35□□□□□ -1.39
SPTA1-202ENST00000461624 UBP1Q9NZI7 540 aa6.35□□□□□ -1.39
SPTA1-202ENST00000461624 CACNA1IQ9P0X4 2223 aa6.34□□□□□ -1.39
SPTA1-202ENST00000461624 C5orf67F2Z3F1 127 aa6.34□□□□□ -1.39
SPTA1-202ENST00000461624 ZEB2O60315 1214 aa6.34□□□□□ -1.39
SPTA1-202ENST00000461624 EFCAB14O75071 495 aa6.34□□□□□ -1.39
SPTA1-202ENST00000461624 HTR3BO95264 441 aa6.34□□□□□ -1.39
SPTA1-202ENST00000461624 GLP2RO95838 553 aa6.34□□□□□ -1.39
SPTA1-202ENST00000461624 C1QTNF9P0C862 333 aa6.34□□□□□ -1.39
SPTA1-202ENST00000461624 MED14OSP0DP75 135 aa6.34□□□□□ -1.39
SPTA1-202ENST00000461624 AKR1B1P15121 316 aa6.34□□□□□ -1.39
SPTA1-202ENST00000461624 RRP1P56182 461 aaKnown RBP6.34□□□□□ -1.39
SPTA1-202ENST00000461624 RACK1P63244 317 aaKnown RBP6.34□□□□□ -1.39
SPTA1-202ENST00000461624 ICA1Q05084 483 aa6.34□□□□□ -1.39
SPTA1-202ENST00000461624 COASYQ13057 564 aa6.34□□□□□ -1.39
SPTA1-202ENST00000461624 CAMK1Q14012 370 aa6.34□□□□□ -1.39
SPTA1-202ENST00000461624 GAB4Q2WGN9 574 aa6.34□□□□□ -1.39
SPTA1-202ENST00000461624 SEZ6Q53EL9 994 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms