RNA–Protein interactions for RNA: ENST00000460657.1

CPNE6-202, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 4,540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-202ENST00000460657 GZMAP12544 262 aa12.83□□□□□ -0.35
CPNE6-202ENST00000460657 PTENP60484 403 aa12.83□□□□□ -0.35
CPNE6-202ENST00000460657 OSTNP61366 133 aa12.83□□□□□ -0.35
CPNE6-202ENST00000460657 LONRF1Q17RB8 773 aa12.83□□□□□ -0.35
CPNE6-202ENST00000460657 BSPRYQ5W0U4 402 aa12.83□□□□□ -0.35
CPNE6-202ENST00000460657 LMBRD2Q68DH5 695 aaPredicted RBP12.83□□□□□ -0.35
CPNE6-202ENST00000460657 APOBEC3HQ6NTF7 200 aaKnown RBP12.83□□□□□ -0.35
CPNE6-202ENST00000460657 GADL1Q6ZQY3 521 aa12.83□□□□□ -0.35
CPNE6-202ENST00000460657 GRAMD1AQ96CP6 724 aa12.83□□□□□ -0.35
CPNE6-202ENST00000460657 ZNF302Q9NR11 478 aa12.83□□□□□ -0.35
CPNE6-202ENST00000460657 ZNF277Q9NRM2 450 aaPredicted RBP12.83□□□□□ -0.35
CPNE6-202ENST00000460657 ANKEF1Q9NU02 776 aa12.83□□□□□ -0.35
CPNE6-202ENST00000460657 NOP53Q9NZM5 478 aaKnown RBP12.83□□□□□ -0.35
CPNE6-202ENST00000460657 CHORDC1Q9UHD1 332 aaPredicted RBP12.83□□□□□ -0.35
CPNE6-202ENST00000460657 PCDHB2Q9Y5E7 798 aa12.83□□□□□ -0.35
CPNE6-202ENST00000460657 CYP3A7-CYP3A51PA0A087WV96 503 aa12.83□□□□□ -0.36
CPNE6-202ENST00000460657 TCP11X1B4DZS4 312 aa12.83□□□□□ -0.36
CPNE6-202ENST00000460657 CYP3A7P24462 503 aa12.83□□□□□ -0.36
CPNE6-202ENST00000460657 CASP5P51878 434 aa12.83□□□□□ -0.36
CPNE6-202ENST00000460657 GPS1Q13098 491 aa12.83□□□□□ -0.36
CPNE6-202ENST00000460657 PLA2G4FQ68DD2 849 aa12.83□□□□□ -0.36
CPNE6-202ENST00000460657 NT5DC3Q86UY8 548 aa12.83□□□□□ -0.36
CPNE6-202ENST00000460657 AGBL1Q96MI9 1066 aa12.83□□□□□ -0.36
CPNE6-202ENST00000460657 ATP5HO75947 161 aa12.83□□□□□ -0.36
CPNE6-202ENST00000460657 PHLDB3Q6NSJ2 640 aa12.83□□□□□ -0.36
CPNE6-202ENST00000460657 COL23A1Q86Y22 540 aaPredicted RBP12.83□□□□□ -0.36
CPNE6-202ENST00000460657 MDM1Q8TC05 714 aa12.83□□□□□ -0.36
CPNE6-202ENST00000460657 CPA5Q8WXQ8 436 aa12.83□□□□□ -0.36
CPNE6-202ENST00000460657 RAPGEF5Q92565 580 aa12.83□□□□□ -0.36
CPNE6-202ENST00000460657 PURBQ96QR8 312 aaKnown RBP12.83□□□□□ -0.36
CPNE6-202ENST00000460657 TUBB6Q9BUF5 446 aa12.83□□□□□ -0.36
CPNE6-202ENST00000460657 DNAJC5Q9H3Z4 198 aa12.83□□□□□ -0.36
CPNE6-202ENST00000460657 SLC9A2Q9UBY0 812 aa12.83□□□□□ -0.36
CPNE6-202ENST00000460657 IQANK1A0A1B0GTG1 560 aa12.83□□□□□ -0.36
CPNE6-202ENST00000460657 WDR91A4D1P6 747 aa12.83□□□□□ -0.36
CPNE6-202ENST00000460657 CNGA1P29973 690 aa12.83□□□□□ -0.36
CPNE6-202ENST00000460657 IGBP1P78318 339 aa12.83□□□□□ -0.36
CPNE6-202ENST00000460657 COG2Q14746 738 aa12.83□□□□□ -0.36
CPNE6-202ENST00000460657 ZNF667Q5HYK9 610 aa12.83□□□□□ -0.36
CPNE6-202ENST00000460657 FBXO25Q8TCJ0 367 aa12.83□□□□□ -0.36
CPNE6-202ENST00000460657 CERKQ8TCT0 537 aa12.83□□□□□ -0.36
CPNE6-202ENST00000460657 N4BP2L2Q92802 583 aaPredicted RBP12.83□□□□□ -0.36
CPNE6-202ENST00000460657 C18orf8Q96DM3 657 aa12.83□□□□□ -0.36
CPNE6-202ENST00000460657 CBWD1Q9BRT8 395 aa12.83□□□□□ -0.36
CPNE6-202ENST00000460657 JPH1Q9HDC5 661 aaPredicted RBP12.83□□□□□ -0.36
CPNE6-202ENST00000460657 GINM1Q9NU53 330 aa12.83□□□□□ -0.36
CPNE6-202ENST00000460657 FBXO28Q9NVF7 368 aa12.83□□□□□ -0.36
CPNE6-202ENST00000460657 HAUS2Q9NVX0 235 aa12.83□□□□□ -0.36
CPNE6-202ENST00000460657 TMX2Q9Y320 296 aa12.83□□□□□ -0.36
CPNE6-202ENST00000460657 BTNL10A8MVZ5 291 aa12.82□□□□□ -0.36
CPNE6-202ENST00000460657 SLITRK3O94933 977 aa12.82□□□□□ -0.36
CPNE6-202ENST00000460657 HYIQ5T013 277 aa12.82□□□□□ -0.36
CPNE6-202ENST00000460657 STYK1Q6J9G0 422 aa12.82□□□□□ -0.36
CPNE6-202ENST00000460657 ZNF449Q6P9G9 518 aa12.82□□□□□ -0.36
CPNE6-202ENST00000460657 RSBN1LQ6PCB5 846 aaPredicted RBP12.82□□□□□ -0.36
CPNE6-202ENST00000460657 THNSL1Q8IYQ7 743 aa12.82□□□□□ -0.36
CPNE6-202ENST00000460657 PPP4R1Q8TF05 950 aa12.82□□□□□ -0.36
CPNE6-202ENST00000460657 MKL1Q969V6 931 aa12.82□□□□□ -0.36
CPNE6-202ENST00000460657 PRMT6Q96LA8 375 aaPredicted RBP12.82□□□□□ -0.36
CPNE6-202ENST00000460657 RPAP3Q9H6T3 665 aaPredicted RBP12.82□□□□□ -0.36
CPNE6-202ENST00000460657 IFT122Q9HBG6 1241 aa12.82□□□□□ -0.36
CPNE6-202ENST00000460657 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.82□□□□□ -0.36
CPNE6-202ENST00000460657 A6NJR5 290 aa12.82□□□□□ -0.36
CPNE6-202ENST00000460657 SGPL1O95470 568 aa12.82□□□□□ -0.36
CPNE6-202ENST00000460657 HNRNPH1P31943 449 aaKnown RBP12.82□□□□□ -0.36
CPNE6-202ENST00000460657 MAPK6Q16659 721 aa12.82□□□□□ -0.36
CPNE6-202ENST00000460657 OTOP1Q7RTM1 612 aa12.82□□□□□ -0.36
CPNE6-202ENST00000460657 SPATA21Q7Z572 469 aa12.82□□□□□ -0.36
CPNE6-202ENST00000460657 TRIM50Q86XT4 487 aa12.82□□□□□ -0.36
CPNE6-202ENST00000460657 KCTD10Q9H3F6 313 aa12.82□□□□□ -0.36
CPNE6-202ENST00000460657 RPF1Q9H9Y2 349 aaKnown RBP12.82□□□□□ -0.36
CPNE6-202ENST00000460657 ARL2BPQ9Y2Y0 163 aa12.82□□□□□ -0.36
CPNE6-202ENST00000460657 PRPSAP2O60256 369 aa12.82□□□□□ -0.36
CPNE6-202ENST00000460657 LCA5LO95447 670 aa12.82□□□□□ -0.36
CPNE6-202ENST00000460657 BAG6P46379 1132 aa12.82□□□□□ -0.36
CPNE6-202ENST00000460657 MARSP56192 900 aaKnown RBP12.82□□□□□ -0.36
CPNE6-202ENST00000460657 CDR2Q01850 454 aa12.82□□□□□ -0.36
CPNE6-202ENST00000460657 KCTD2Q14681 263 aa12.82□□□□□ -0.36
CPNE6-202ENST00000460657 ZNF699Q32M78 642 aa12.82□□□□□ -0.36
CPNE6-202ENST00000460657 SUPT20HL1Q3ZLR7 823 aa12.82□□□□□ -0.36
CPNE6-202ENST00000460657 TTMPQ5BVD1 217 aa12.82□□□□□ -0.36
CPNE6-202ENST00000460657 C11orf63Q6NUN7 778 aa12.82□□□□□ -0.36
CPNE6-202ENST00000460657 MREGQ8N565 214 aa12.82□□□□□ -0.36
CPNE6-202ENST00000460657 THOC1Q96FV9 657 aaKnown RBP12.82□□□□□ -0.36
CPNE6-202ENST00000460657 FAM167AQ96KS9 214 aa12.82□□□□□ -0.36
CPNE6-202ENST00000460657 TMEM117Q9H0C3 514 aa12.82□□□□□ -0.36
CPNE6-202ENST00000460657 DDX56Q9NY93 547 aaKnown RBP12.82□□□□□ -0.36
CPNE6-202ENST00000460657 PPP1R9AQ9ULJ8 1098 aa12.82□□□□□ -0.36
CPNE6-202ENST00000460657 TBX20Q9UMR3 447 aa12.82□□□□□ -0.36
CPNE6-202ENST00000460657 USP15Q9Y4E8 981 aaPredicted RBP12.82□□□□□ -0.36
CPNE6-202ENST00000460657 ZHX2Q9Y6X8 837 aa12.82□□□□□ -0.36
CPNE6-202ENST00000460657 CCT8L1PA6NM43 557 aa12.81□□□□□ -0.36
CPNE6-202ENST00000460657 EML1O00423 815 aa12.81□□□□□ -0.36
CPNE6-202ENST00000460657 AP3M2P53677 418 aa12.81□□□□□ -0.36
CPNE6-202ENST00000460657 BAATQ14032 418 aaPredicted RBP12.81□□□□□ -0.36
CPNE6-202ENST00000460657 KLHL38Q2WGJ6 581 aa12.81□□□□□ -0.36
CPNE6-202ENST00000460657 XKR3Q5GH77 459 aa12.81□□□□□ -0.36
CPNE6-202ENST00000460657 OR6B2Q6IFH4 312 aa12.81□□□□□ -0.36
CPNE6-202ENST00000460657 ACAD10Q6JQN1 1059 aa12.81□□□□□ -0.36
CPNE6-202ENST00000460657 EEPD1Q7L9B9 569 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms