RNA–Protein interactions for RNA: ENST00000460378.1

EPB41-208, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best)

Gene EPB41, Length 5,212 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-208ENST00000460378 ANO10Q9NW15 660 aa10.67□□□□□ -0.7
EPB41-208ENST00000460378 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.67□□□□□ -0.7
EPB41-208ENST00000460378 WDR90Q96KV7 1748 aa10.67□□□□□ -0.7
EPB41-208ENST00000460378 F2P00734 622 aa10.67□□□□□ -0.7
EPB41-208ENST00000460378 DARSP14868 501 aaKnown RBP10.67□□□□□ -0.7
EPB41-208ENST00000460378 PTPN2P17706 415 aa10.67□□□□□ -0.7
EPB41-208ENST00000460378 DNA2P51530 1060 aa10.67□□□□□ -0.7
EPB41-208ENST00000460378 PDIA5Q14554 519 aa10.67□□□□□ -0.7
EPB41-208ENST00000460378 KARSQ15046 597 aaKnown RBP10.67□□□□□ -0.7
EPB41-208ENST00000460378 Q4G0T1 1027 aa10.67□□□□□ -0.7
EPB41-208ENST00000460378 MPZL3Q6UWV2 235 aa10.67□□□□□ -0.7
EPB41-208ENST00000460378 TOGARAM1Q9Y4F4 1720 aa10.67□□□□□ -0.7
EPB41-208ENST00000460378 CASP8AP2Q9UKL3 1982 aa10.67□□□□□ -0.7
EPB41-208ENST00000460378 GOLGA8IPA6NC78 632 aa10.67□□□□□ -0.7
EPB41-208ENST00000460378 GOLGA8JA6NMD2 632 aa10.67□□□□□ -0.7
EPB41-208ENST00000460378 CSDE1O75534 798 aaKnown RBP10.67□□□□□ -0.7
EPB41-208ENST00000460378 CNMDO75829 334 aa10.67□□□□□ -0.7
EPB41-208ENST00000460378 GJB5O95377 273 aa10.67□□□□□ -0.7
EPB41-208ENST00000460378 MLH1P40692 756 aa10.67□□□□□ -0.7
EPB41-208ENST00000460378 FAAP100Q0VG06 881 aa10.67□□□□□ -0.7
EPB41-208ENST00000460378 MTMR3Q13615 1198 aa10.67□□□□□ -0.7
EPB41-208ENST00000460378 RAPGEF1Q13905 1077 aa10.67□□□□□ -0.7
EPB41-208ENST00000460378 TMEM240Q5SV17 173 aa10.67□□□□□ -0.7
EPB41-208ENST00000460378 ZNF449Q6P9G9 518 aa10.67□□□□□ -0.7
EPB41-208ENST00000460378 SCARA5Q6ZMJ2 495 aa10.67□□□□□ -0.7
EPB41-208ENST00000460378 HDDC3Q8N4P3 179 aa10.67□□□□□ -0.7
EPB41-208ENST00000460378 OXCT2Q9BYC2 517 aaPredicted RBP10.67□□□□□ -0.7
EPB41-208ENST00000460378 MACROD2A1Z1Q3 448 aa10.66□□□□□ -0.7
EPB41-208ENST00000460378 CDC25CP30307 473 aa10.66□□□□□ -0.7
EPB41-208ENST00000460378 MCM6Q14566 821 aa10.66□□□□□ -0.7
EPB41-208ENST00000460378 CPA6Q8N4T0 437 aa10.66□□□□□ -0.7
EPB41-208ENST00000460378 ZNF830Q96NB3 372 aaPredicted RBP10.66□□□□□ -0.7
EPB41-208ENST00000460378 SNTG2Q9NY99 539 aa10.66□□□□□ -0.7
EPB41-208ENST00000460378 E9PMD0 336 aa10.66□□□□□ -0.7
EPB41-208ENST00000460378 PLS3P13797 630 aa10.66□□□□□ -0.7
EPB41-208ENST00000460378 WDR5P61964 334 aaKnown RBP10.66□□□□□ -0.7
EPB41-208ENST00000460378 ITIH3Q06033 890 aa10.66□□□□□ -0.7
EPB41-208ENST00000460378 ANO4Q32M45 955 aa10.66□□□□□ -0.7
EPB41-208ENST00000460378 TEX35Q5T0J7 233 aa10.66□□□□□ -0.7
EPB41-208ENST00000460378 DCLRE1AQ6PJP8 1040 aa10.66□□□□□ -0.7
EPB41-208ENST00000460378 LRRC31Q6UY01 552 aa10.66□□□□□ -0.7
EPB41-208ENST00000460378 ANKRD33Q7Z3H0 272 aa10.66□□□□□ -0.7
EPB41-208ENST00000460378 KREMEN2Q8NCW0 462 aa10.66□□□□□ -0.7
EPB41-208ENST00000460378 SFXN1Q9H9B4 322 aa10.66□□□□□ -0.7
EPB41-208ENST00000460378 MOSPD1Q9UJG1 213 aa10.66□□□□□ -0.7
EPB41-208ENST00000460378 NCKAP1Q9Y2A7 1128 aa10.66□□□□□ -0.7
EPB41-208ENST00000460378 SART1O43290 800 aaKnown RBP10.66□□□□□ -0.7
EPB41-208ENST00000460378 MCF2P10911 925 aa10.66□□□□□ -0.7
EPB41-208ENST00000460378 IRF1P10914 325 aa10.66□□□□□ -0.7
EPB41-208ENST00000460378 PSMC2P35998 433 aaKnown RBP10.66□□□□□ -0.7
EPB41-208ENST00000460378 SEC23AQ15436 765 aa10.66□□□□□ -0.7
EPB41-208ENST00000460378 FBXO47Q5MNV8 452 aa10.66□□□□□ -0.7
EPB41-208ENST00000460378 MTERF4Q7Z6M4 381 aaKnown RBP10.66□□□□□ -0.7
EPB41-208ENST00000460378 HOOK3Q86VS8 718 aa10.66□□□□□ -0.7
EPB41-208ENST00000460378 CDR2LQ86X02 465 aaPredicted RBP10.66□□□□□ -0.7
EPB41-208ENST00000460378 ADAMTS19Q8TE59 1207 aa10.66□□□□□ -0.7
EPB41-208ENST00000460378 PCDHB4Q9Y5E5 795 aa10.66□□□□□ -0.7
EPB41-208ENST00000460378 BIN1O00499 593 aa10.66□□□□□ -0.7
EPB41-208ENST00000460378 MAP3K7O43318 606 aa10.66□□□□□ -0.7
EPB41-208ENST00000460378 AKAP5P24588 427 aa10.66□□□□□ -0.7
EPB41-208ENST00000460378 SH3RF1Q7Z6J0 888 aa10.66□□□□□ -0.7
EPB41-208ENST00000460378 ATXN2LQ8WWM7 1075 aaKnown RBP10.66□□□□□ -0.7
EPB41-208ENST00000460378 LRCH3Q96II8 777 aa10.66□□□□□ -0.7
EPB41-208ENST00000460378 KIF2CQ99661 725 aa10.66□□□□□ -0.7
EPB41-208ENST00000460378 ARMCX3Q9UH62 379 aaPredicted RBP10.66□□□□□ -0.7
EPB41-208ENST00000460378 SYNJ2BP-COX16A0A087WUM0 186 aa10.65□□□□□ -0.7
EPB41-208ENST00000460378 BPIFB4P59827 614 aa10.65□□□□□ -0.7
EPB41-208ENST00000460378 DCUN1D2Q6PH85 259 aa10.65□□□□□ -0.7
EPB41-208ENST00000460378 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.65□□□□□ -0.7
EPB41-208ENST00000460378 DDX42Q86XP3 938 aaKnown RBP eCLIP10.65□□□□□ -0.7
EPB41-208ENST00000460378 GPD1LQ8N335 351 aa10.65□□□□□ -0.7
EPB41-208ENST00000460378 KLHL23Q8NBE8 558 aa10.65□□□□□ -0.7
EPB41-208ENST00000460378 CLEC4DQ8WXI8 215 aa10.65□□□□□ -0.7
EPB41-208ENST00000460378 E2F7Q96AV8 911 aa10.65□□□□□ -0.7
EPB41-208ENST00000460378 POLR3CQ9BUI4 534 aaPredicted RBP10.65□□□□□ -0.7
EPB41-208ENST00000460378 CRISPLD2Q9H0B8 497 aa10.65□□□□□ -0.7
EPB41-208ENST00000460378 COX16Q9P0S2 106 aa10.65□□□□□ -0.7
EPB41-208ENST00000460378 LMAN1P49257 510 aa10.65□□□□□ -0.7
EPB41-208ENST00000460378 CCDC60Q8IWA6 550 aaPredicted RBP10.65□□□□□ -0.7
EPB41-208ENST00000460378 FAM126BQ8IXS8 530 aa10.65□□□□□ -0.7
EPB41-208ENST00000460378 TRAV19A0A0A6YYK7 116 aa10.65□□□□□ -0.7
EPB41-208ENST00000460378 CYP3A4P08684 503 aa10.65□□□□□ -0.7
EPB41-208ENST00000460378 LHX1P48742 406 aa10.65□□□□□ -0.7
EPB41-208ENST00000460378 EPC2Q52LR7 807 aa10.65□□□□□ -0.7
EPB41-208ENST00000460378 XXYLT1Q8NBI6 393 aa10.65□□□□□ -0.7
EPB41-208ENST00000460378 LEMD2Q8NC56 503 aa10.65□□□□□ -0.7
EPB41-208ENST00000460378 LPPQ93052 612 aa10.65□□□□□ -0.7
EPB41-208ENST00000460378 INTS4Q96HW7 963 aaKnown RBP10.65□□□□□ -0.7
EPB41-208ENST00000460378 NCAPGQ9BPX3 1015 aa10.65□□□□□ -0.7
EPB41-208ENST00000460378 STXBP5LQ9Y2K9 1186 aa10.65□□□□□ -0.7
EPB41-208ENST00000460378 MYADML2A6NDP7 307 aa10.65□□□□□ -0.71
EPB41-208ENST00000460378 CYB561D2O14569 222 aa10.65□□□□□ -0.71
EPB41-208ENST00000460378 PER2O15055 1255 aa10.65□□□□□ -0.71
EPB41-208ENST00000460378 GRSF1Q12849 480 aaKnown RBP eCLIP10.65□□□□□ -0.713e-7■□□□□ 8.6
EPB41-208ENST00000460378 LRMPQ12912 555 aa10.65□□□□□ -0.71
EPB41-208ENST00000460378 TUSC3Q13454 348 aa10.65□□□□□ -0.71
EPB41-208ENST00000460378 NELL2Q99435 816 aa10.65□□□□□ -0.71
EPB41-208ENST00000460378 TARS2Q9BW92 718 aaKnown RBP10.65□□□□□ -0.71
EPB41-208ENST00000460378 UPF3AQ9H1J1 476 aaKnown RBP10.65□□□□□ -0.71
EPB41-208ENST00000460378 PLEKHA4Q9H4M7 779 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms