RNA–Protein interactions for RNA: ENST00000459902.1

CKAP2-204, Transcript of cytoskeleton associated protein 2, humanhuman

TSL 2

Gene CKAP2, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-204ENST00000459902 ALOX15P16050 662 aaPredicted RBP8.13□□□□□ -1.11
CKAP2-204ENST00000459902 SYN1P17600 705 aa8.13□□□□□ -1.11
CKAP2-204ENST00000459902 FPR1P21462 350 aa8.13□□□□□ -1.11
CKAP2-204ENST00000459902 FLT3LGP49771 235 aa8.13□□□□□ -1.11
CKAP2-204ENST00000459902 DSC2Q02487 901 aa8.13□□□□□ -1.11
CKAP2-204ENST00000459902 ELAVL1Q15717 326 aaKnown RBP8.13□□□□□ -1.11
CKAP2-204ENST00000459902 FAM102BQ5T8I3 360 aa8.13□□□□□ -1.11
CKAP2-204ENST00000459902 XYLT1Q86Y38 959 aa8.13□□□□□ -1.11
CKAP2-204ENST00000459902 ZGPATQ8N5A5 531 aaKnown RBP8.13□□□□□ -1.11
CKAP2-204ENST00000459902 LSM14BQ9BX40 385 aaKnown RBP8.13□□□□□ -1.11
CKAP2-204ENST00000459902 TDP1Q9NUW8 608 aa8.13□□□□□ -1.11
CKAP2-204ENST00000459902 MYBBP1AQ9BQG0 1328 aaKnown RBP8.12□□□□□ -1.11
CKAP2-204ENST00000459902 IL2RBP14784 551 aa8.12□□□□□ -1.11
CKAP2-204ENST00000459902 ACO1P21399 889 aaKnown RBP8.12□□□□□ -1.11
CKAP2-204ENST00000459902 PCSK1P29120 753 aa8.12□□□□□ -1.11
CKAP2-204ENST00000459902 CDC42EP1Q00587 391 aa8.12□□□□□ -1.11
CKAP2-204ENST00000459902 TARDBPQ13148 414 aaKnown RBP eCLIP8.12□□□□□ -1.11
CKAP2-204ENST00000459902 SP140Q13342 867 aa8.12□□□□□ -1.11
CKAP2-204ENST00000459902 ANKS6Q68DC2 871 aa8.12□□□□□ -1.11
CKAP2-204ENST00000459902 MAMDC4Q6UXC1 1216 aa8.12□□□□□ -1.11
CKAP2-204ENST00000459902 APBB1IPQ7Z5R6 666 aaPredicted RBP8.12□□□□□ -1.11
CKAP2-204ENST00000459902 SGMS1Q86VZ5 419 aa8.12□□□□□ -1.11
CKAP2-204ENST00000459902 ZNF808Q8N4W9 903 aaPredicted RBP8.12□□□□□ -1.11
CKAP2-204ENST00000459902 SLC12A5Q9H2X9 1139 aa8.12□□□□□ -1.11
CKAP2-204ENST00000459902 TMEM140Q9NV12 185 aa8.12□□□□□ -1.11
CKAP2-204ENST00000459902 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.12□□□□□ -1.11
CKAP2-204ENST00000459902 ACTL7AQ9Y615 435 aa8.12□□□□□ -1.11
CKAP2-204ENST00000459902 CFAP20Q9Y6A4 193 aaKnown RBP8.12□□□□□ -1.11
CKAP2-204ENST00000459902 SGTAO43765 313 aa8.11□□□□□ -1.11
CKAP2-204ENST00000459902 MFAP3LO75121 409 aa8.11□□□□□ -1.11
CKAP2-204ENST00000459902 GPR32O75388 356 aa8.11□□□□□ -1.11
CKAP2-204ENST00000459902 HMGB1P09429 215 aaKnown RBP8.11□□□□□ -1.11
CKAP2-204ENST00000459902 GNAT2P19087 354 aa8.11□□□□□ -1.11
CKAP2-204ENST00000459902 DDCP20711 480 aa8.11□□□□□ -1.11
CKAP2-204ENST00000459902 LPOP22079 712 aaPredicted RBP8.11□□□□□ -1.11
CKAP2-204ENST00000459902 ATP8B2P98198 1209 aa8.11□□□□□ -1.11
CKAP2-204ENST00000459902 HHEXQ03014 270 aa8.11□□□□□ -1.11
CKAP2-204ENST00000459902 GTF2H3Q13889 308 aa8.11□□□□□ -1.11
CKAP2-204ENST00000459902 ATAT1Q5SQI0 421 aa8.11□□□□□ -1.11
CKAP2-204ENST00000459902 IFIT1BQ5T764 474 aaKnown RBP8.11□□□□□ -1.11
CKAP2-204ENST00000459902 AFMIDQ63HM1 303 aa8.11□□□□□ -1.11
CKAP2-204ENST00000459902 PPP4R3AQ6IN85 833 aa8.11□□□□□ -1.11
CKAP2-204ENST00000459902 ZNF585AQ6P3V2 769 aa8.11□□□□□ -1.11
CKAP2-204ENST00000459902 EPM2AIP1Q7L775 607 aaPredicted RBP8.11□□□□□ -1.11
CKAP2-204ENST00000459902 TCEAL8Q8IYN2 117 aa8.11□□□□□ -1.11
CKAP2-204ENST00000459902 TTC9BQ8N6N2 239 aa8.11□□□□□ -1.11
CKAP2-204ENST00000459902 CHST13Q8NET6 341 aa8.11□□□□□ -1.11
CKAP2-204ENST00000459902 MDGA1Q8NFP4 955 aa8.11□□□□□ -1.11
CKAP2-204ENST00000459902 SLC35B2Q8TB61 432 aa8.11□□□□□ -1.11
CKAP2-204ENST00000459902 CASKIN2Q8WXE0 1202 aa8.11□□□□□ -1.11
CKAP2-204ENST00000459902 ST8SIA2Q92186 375 aa8.11□□□□□ -1.11
CKAP2-204ENST00000459902 HPS3Q969F9 1004 aa8.11□□□□□ -1.11
CKAP2-204ENST00000459902 LRGUKQ96M69 825 aa8.11□□□□□ -1.11
CKAP2-204ENST00000459902 AIFM3Q96NN9 605 aa8.11□□□□□ -1.11
CKAP2-204ENST00000459902 DMRTA2Q96SC8 542 aa8.11□□□□□ -1.11
CKAP2-204ENST00000459902 CPPED1Q9BRF8 314 aaPredicted RBP8.11□□□□□ -1.11
CKAP2-204ENST00000459902 DEF6Q9H4E7 631 aa8.11□□□□□ -1.11
CKAP2-204ENST00000459902 ANLNQ9NQW6 1124 aa8.11□□□□□ -1.11
CKAP2-204ENST00000459902 AP1G1O43747 822 aa8.1□□□□□ -1.11
CKAP2-204ENST00000459902 MTM1Q13496 603 aa8.1□□□□□ -1.11
CKAP2-204ENST00000459902 ZNF267Q14586 743 aaPredicted RBP8.1□□□□□ -1.11
CKAP2-204ENST00000459902 HS1BP3Q53T59 392 aa8.1□□□□□ -1.11
CKAP2-204ENST00000459902 NXNQ6DKJ4 435 aa8.1□□□□□ -1.11
CKAP2-204ENST00000459902 CXorf57Q6NSI4 855 aaKnown RBP8.1□□□□□ -1.11
CKAP2-204ENST00000459902 DOK3Q7L591 496 aa8.1□□□□□ -1.11
CKAP2-204ENST00000459902 GPRIN1Q7Z2K8 1008 aa8.1□□□□□ -1.11
CKAP2-204ENST00000459902 RSPH3Q86UC2 560 aa8.1□□□□□ -1.11
CKAP2-204ENST00000459902 FAM83AQ86UY5 434 aa8.1□□□□□ -1.11
CKAP2-204ENST00000459902 DRC7Q8IY82 874 aa8.1□□□□□ -1.11
CKAP2-204ENST00000459902 MIEF2Q96C03 454 aa8.1□□□□□ -1.11
CKAP2-204ENST00000459902 MVB12AQ96EY5 273 aa8.1□□□□□ -1.11
CKAP2-204ENST00000459902 TMX3Q96JJ7 454 aa8.1□□□□□ -1.11
CKAP2-204ENST00000459902 CLPTM1LQ96KA5 538 aa8.1□□□□□ -1.11
CKAP2-204ENST00000459902 MRGPRX4Q96LA9 322 aa8.1□□□□□ -1.11
CKAP2-204ENST00000459902 C8orf49Q96NF6 230 aa8.1□□□□□ -1.11
CKAP2-204ENST00000459902 SMPD4Q9NXE4 827 aa8.1□□□□□ -1.11
CKAP2-204ENST00000459902 MOCS1Q9NZB8 636 aa8.1□□□□□ -1.11
CKAP2-204ENST00000459902 CHPF2Q9P2E5 772 aa8.1□□□□□ -1.11
CKAP2-204ENST00000459902 TBKBP1A7MCY6 615 aa8.09□□□□□ -1.11
CKAP2-204ENST00000459902 CAPN14A8MX76 684 aa8.09□□□□□ -1.11
CKAP2-204ENST00000459902 CXorf49A8MYA2 514 aaPredicted RBP8.09□□□□□ -1.11
CKAP2-204ENST00000459902 DTNBO60941 627 aa8.09□□□□□ -1.11
CKAP2-204ENST00000459902 OFD1O75665 1012 aa8.09□□□□□ -1.11
CKAP2-204ENST00000459902 ALDH1A3P47895 512 aa8.09□□□□□ -1.11
CKAP2-204ENST00000459902 CSRP2Q16527 193 aa8.09□□□□□ -1.11
CKAP2-204ENST00000459902 PGS1Q32NB8 556 aa8.09□□□□□ -1.11
CKAP2-204ENST00000459902 B3GNT9Q6UX72 402 aa8.09□□□□□ -1.11
CKAP2-204ENST00000459902 TTC7BQ86TV6 843 aa8.09□□□□□ -1.11
CKAP2-204ENST00000459902 MYO1HQ8N1T3 1032 aa8.09□□□□□ -1.11
CKAP2-204ENST00000459902 ANKRD35Q8N283 1001 aa8.09□□□□□ -1.11
CKAP2-204ENST00000459902 MAGEB6Q8N7X4 407 aa8.09□□□□□ -1.11
CKAP2-204ENST00000459902 MB21D1Q8N884 522 aa8.09□□□□□ -1.11
CKAP2-204ENST00000459902 IFI44Q8TCB0 444 aa8.09□□□□□ -1.11
CKAP2-204ENST00000459902 NSUN6Q8TEA1 469 aaKnown RBP8.09□□□□□ -1.11
CKAP2-204ENST00000459902 EDAQ92838 391 aa8.09□□□□□ -1.11
CKAP2-204ENST00000459902 FAM89AQ96GI7 184 aa8.09□□□□□ -1.11
CKAP2-204ENST00000459902 ADOQ96SZ5 270 aa8.09□□□□□ -1.11
CKAP2-204ENST00000459902 HDAC5Q9UQL6 1122 aa8.09□□□□□ -1.11
CKAP2-204ENST00000459902 PNPLA7Q6ZV29 1317 aa8.08□□□□□ -1.12
CKAP2-204ENST00000459902 B5MCH6 92 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms