RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 SYCE2Q6PIF2 218 aa17.7■□□□□ 0.42
COL7A1-203ENST00000459756 TAS1R3Q7RTX0 852 aa17.7■□□□□ 0.42
COL7A1-203ENST00000459756 PPFIBP1Q86W92 1011 aa17.7■□□□□ 0.42
COL7A1-203ENST00000459756 GPBP1Q86WP2 473 aa17.7■□□□□ 0.42
COL7A1-203ENST00000459756 RNF168Q8IYW5 571 aaPredicted RBP17.7■□□□□ 0.42
COL7A1-203ENST00000459756 TMEM161BQ8NDZ6 487 aa17.7■□□□□ 0.42
COL7A1-203ENST00000459756 SUSD6Q92537 303 aa17.7■□□□□ 0.42
COL7A1-203ENST00000459756 RAD54LQ92698 747 aa17.7■□□□□ 0.42
COL7A1-203ENST00000459756 HERC2P3Q9BVR0 1158 aa17.7■□□□□ 0.42
COL7A1-203ENST00000459756 EMILIN2Q9BXX0 1053 aa17.7■□□□□ 0.42
COL7A1-203ENST00000459756 S1PR5Q9H228 398 aa17.7■□□□□ 0.42
COL7A1-203ENST00000459756 PTPRHQ9HD43 1115 aa17.7■□□□□ 0.42
COL7A1-203ENST00000459756 BLOC1S4Q9NUP1 217 aa17.7■□□□□ 0.42
COL7A1-203ENST00000459756 GDAQ9Y2T3 454 aa17.7■□□□□ 0.42
COL7A1-203ENST00000459756 NPHP3-ACAD11A0A0J9YXS1 232 aa17.69■□□□□ 0.42
COL7A1-203ENST00000459756 LILRB3O75022 631 aa17.69■□□□□ 0.42
COL7A1-203ENST00000459756 URODP06132 367 aa17.69■□□□□ 0.42
COL7A1-203ENST00000459756 PDIA4P13667 645 aaKnown RBP17.69■□□□□ 0.42
COL7A1-203ENST00000459756 SCP2P22307 547 aa17.69■□□□□ 0.42
COL7A1-203ENST00000459756 CEBPZQ03701 1054 aaKnown RBP17.69■□□□□ 0.42
COL7A1-203ENST00000459756 DHX8Q14562 1220 aaKnown RBP17.69■□□□□ 0.42
COL7A1-203ENST00000459756 HSP90AA2PQ14568 343 aaPredicted RBP17.69■□□□□ 0.42
COL7A1-203ENST00000459756 ZNF568Q3ZCX4 644 aa17.69■□□□□ 0.42
COL7A1-203ENST00000459756 LRRC15Q8TF66 581 aa17.69■□□□□ 0.42
COL7A1-203ENST00000459756 EPSTI1Q96J88 318 aa17.69■□□□□ 0.42
COL7A1-203ENST00000459756 REEP2Q9BRK0 252 aa17.69■□□□□ 0.42
COL7A1-203ENST00000459756 TARS2Q9BW92 718 aaKnown RBP17.69■□□□□ 0.42
COL7A1-203ENST00000459756 C1QTNF1Q9BXJ1 281 aa17.69■□□□□ 0.42
COL7A1-203ENST00000459756 CDT1Q9H211 546 aa17.69■□□□□ 0.42
COL7A1-203ENST00000459756 DZANK1Q9NVP4 752 aa17.69■□□□□ 0.42
COL7A1-203ENST00000459756 F8W810 466 aa17.68■□□□□ 0.42
COL7A1-203ENST00000459756 BRD1O95696 1058 aa17.68■□□□□ 0.42
COL7A1-203ENST00000459756 KRT18P05783 430 aaKnown RBP17.68■□□□□ 0.42
COL7A1-203ENST00000459756 HSP90AA1P07900 732 aaKnown RBP17.68■□□□□ 0.42
COL7A1-203ENST00000459756 CNPP09543 421 aaKnown RBP17.68■□□□□ 0.42
COL7A1-203ENST00000459756 MAPTP10636 758 aaKnown RBP17.68■□□□□ 0.42
COL7A1-203ENST00000459756 MCF2P10911 925 aa17.68■□□□□ 0.42
COL7A1-203ENST00000459756 PROZP22891 400 aa17.68■□□□□ 0.42
COL7A1-203ENST00000459756 DDIT3P35638 169 aa17.68■□□□□ 0.42
COL7A1-203ENST00000459756 TXLNAP40222 546 aa17.68■□□□□ 0.42
COL7A1-203ENST00000459756 GRM5P41594 1212 aa17.68■□□□□ 0.42
COL7A1-203ENST00000459756 GLUD2P49448 558 aa17.68■□□□□ 0.42
COL7A1-203ENST00000459756 YARSP54577 528 aaKnown RBP17.68■□□□□ 0.42
COL7A1-203ENST00000459756 ITIH3Q06033 890 aa17.68■□□□□ 0.42
COL7A1-203ENST00000459756 MCM6Q14566 821 aa17.68■□□□□ 0.42
COL7A1-203ENST00000459756 SLC39A14Q15043 492 aa17.68■□□□□ 0.42
COL7A1-203ENST00000459756 MPZL3Q6UWV2 235 aa17.68■□□□□ 0.42
COL7A1-203ENST00000459756 SLC22A17Q8WUG5 538 aa17.68■□□□□ 0.42
COL7A1-203ENST00000459756 LARP4BQ92615 738 aaKnown RBP17.68■□□□□ 0.42
COL7A1-203ENST00000459756 KCNN1Q92952 543 aa17.68■□□□□ 0.42
COL7A1-203ENST00000459756 KLHL5Q96PQ7 755 aa17.68■□□□□ 0.42
COL7A1-203ENST00000459756 USP28Q96RU2 1077 aa17.68■□□□□ 0.42
COL7A1-203ENST00000459756 TCHPQ9BT92 498 aa17.68■□□□□ 0.42
COL7A1-203ENST00000459756 CCDC94Q9BW85 323 aaPredicted RBP17.68■□□□□ 0.42
COL7A1-203ENST00000459756 TOPORSQ9NS56 1045 aaPredicted RBP17.68■□□□□ 0.42
COL7A1-203ENST00000459756 CCDC39Q9UFE4 941 aa17.68■□□□□ 0.42
COL7A1-203ENST00000459756 ADAM28Q9UKQ2 775 aa17.68■□□□□ 0.42
COL7A1-203ENST00000459756 PI4K2BG5E9Z4 385 aa17.67■□□□□ 0.42
COL7A1-203ENST00000459756 TADA2AO75478 443 aa17.67■□□□□ 0.42
COL7A1-203ENST00000459756 TOM1L1O75674 476 aa17.67■□□□□ 0.42
COL7A1-203ENST00000459756 EPCAMP16422 314 aa17.67■□□□□ 0.42
COL7A1-203ENST00000459756 KLRC2P26717 231 aa17.67■□□□□ 0.42
COL7A1-203ENST00000459756 ZNF131P52739 623 aa17.67■□□□□ 0.42
COL7A1-203ENST00000459756 NCKAP1LP55160 1127 aa17.67■□□□□ 0.42
COL7A1-203ENST00000459756 DSG1Q02413 1049 aa17.67■□□□□ 0.42
COL7A1-203ENST00000459756 CACNB1Q02641 598 aaPredicted RBP17.67■□□□□ 0.42
COL7A1-203ENST00000459756 CBX2Q14781 532 aaPredicted RBP17.67■□□□□ 0.42
COL7A1-203ENST00000459756 NAB2Q15742 525 aa17.67■□□□□ 0.42
COL7A1-203ENST00000459756 SPECC1Q5M775 1068 aa17.67■□□□□ 0.42
COL7A1-203ENST00000459756 KIAA0319Q5VV43 1072 aa17.67■□□□□ 0.42
COL7A1-203ENST00000459756 KIAA1841Q6NSI8 718 aa17.67■□□□□ 0.42
COL7A1-203ENST00000459756 CES5AQ6NT32 575 aa17.67■□□□□ 0.42
COL7A1-203ENST00000459756 FUT10Q6P4F1 479 aa17.67■□□□□ 0.42
COL7A1-203ENST00000459756 ZPBP2Q6X784 338 aa17.67■□□□□ 0.42
COL7A1-203ENST00000459756 USP49Q70CQ1 688 aa17.67■□□□□ 0.42
COL7A1-203ENST00000459756 TAS1R1Q7RTX1 841 aa17.67■□□□□ 0.42
COL7A1-203ENST00000459756 GPR65Q8IYL9 337 aa17.67■□□□□ 0.42
COL7A1-203ENST00000459756 KRI1Q8N9T8 703 aaKnown RBP17.67■□□□□ 0.42
COL7A1-203ENST00000459756 KHSRPQ92945 711 aaKnown RBP eCLIP17.67■□□□□ 0.42
COL7A1-203ENST00000459756 CLIC6Q96NY7 704 aa17.67■□□□□ 0.42
COL7A1-203ENST00000459756 PHF7Q9BWX1 381 aaPredicted RBP17.67■□□□□ 0.42
COL7A1-203ENST00000459756 EPHX3Q9H6B9 360 aa17.67■□□□□ 0.42
COL7A1-203ENST00000459756 PARVGQ9HBI0 331 aa17.67■□□□□ 0.42
COL7A1-203ENST00000459756 CHST7Q9NS84 486 aa17.67■□□□□ 0.42
COL7A1-203ENST00000459756 STK17AQ9UEE5 414 aa17.67■□□□□ 0.42
COL7A1-203ENST00000459756 CASTOR2A6NHX0 329 aa17.66■□□□□ 0.42
COL7A1-203ENST00000459756 C2CD2LO14523 706 aa17.66■□□□□ 0.42
COL7A1-203ENST00000459756 ABLIM1O14639 778 aa17.66■□□□□ 0.42
COL7A1-203ENST00000459756 TBCAO75347 108 aaKnown RBP17.66■□□□□ 0.42
COL7A1-203ENST00000459756 FAM13AO94988 1023 aa17.66■□□□□ 0.42
COL7A1-203ENST00000459756 ADH1AP07327 375 aa17.66■□□□□ 0.42
COL7A1-203ENST00000459756 ALADP13716 330 aa17.66■□□□□ 0.42
COL7A1-203ENST00000459756 NASPP49321 788 aaPredicted RBP17.66■□□□□ 0.42
COL7A1-203ENST00000459756 USP41Q3LFD5 358 aa17.66■□□□□ 0.42
COL7A1-203ENST00000459756 HAUS6Q7Z4H7 955 aa17.66■□□□□ 0.42
COL7A1-203ENST00000459756 ZBTB33Q86T24 672 aa17.66■□□□□ 0.42
COL7A1-203ENST00000459756 MYCT1Q8N699 235 aa17.66■□□□□ 0.42
COL7A1-203ENST00000459756 RABGGTAQ92696 567 aa17.66■□□□□ 0.42
COL7A1-203ENST00000459756 PPP1R10Q96QC0 940 aaKnown RBP17.66■□□□□ 0.42
COL7A1-203ENST00000459756 PAAF1Q9BRP4 392 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms