RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 ATP2A1O14983 1001 aa9.48□□□□□ -0.89
HDAC3-202ENST00000459727 SLC16A4O15374 487 aa9.48□□□□□ -0.89
HDAC3-202ENST00000459727 RGS16O15492 202 aaPredicted RBP9.48□□□□□ -0.89
HDAC3-202ENST00000459727 THAP12O43422 761 aa9.48□□□□□ -0.89
HDAC3-202ENST00000459727 PSTPIP1O43586 416 aa9.48□□□□□ -0.89
HDAC3-202ENST00000459727 EXTL3O43909 919 aa9.48□□□□□ -0.89
HDAC3-202ENST00000459727 RAD17O75943 681 aa9.48□□□□□ -0.89
HDAC3-202ENST00000459727 ITIH2P19823 946 aa9.48□□□□□ -0.89
HDAC3-202ENST00000459727 COMTP21964 271 aa9.48□□□□□ -0.89
HDAC3-202ENST00000459727 TBXAS1P24557 533 aaPredicted RBP9.48□□□□□ -0.89
HDAC3-202ENST00000459727 CNGA1P29973 690 aa9.48□□□□□ -0.89
HDAC3-202ENST00000459727 HPDP32754 393 aaPredicted RBP9.48□□□□□ -0.89
HDAC3-202ENST00000459727 RDXP35241 583 aaKnown RBP9.48□□□□□ -0.89
HDAC3-202ENST00000459727 NPTX2P47972 431 aa9.48□□□□□ -0.89
HDAC3-202ENST00000459727 PEX5P50542 639 aa9.48□□□□□ -0.89
HDAC3-202ENST00000459727 RPS6P62753 249 aaKnown RBP9.48□□□□□ -0.89
HDAC3-202ENST00000459727 MRPS9P82933 396 aaKnown RBP9.48□□□□□ -0.89
HDAC3-202ENST00000459727 CENPCQ03188 943 aa9.48□□□□□ -0.89
HDAC3-202ENST00000459727 CYP24A1Q07973 514 aa9.48□□□□□ -0.89
HDAC3-202ENST00000459727 STRN3Q13033 797 aa9.48□□□□□ -0.89
HDAC3-202ENST00000459727 MESDQ14696 234 aa9.48□□□□□ -0.89
HDAC3-202ENST00000459727 ZYXQ15942 572 aaKnown RBP9.48□□□□□ -0.89
HDAC3-202ENST00000459727 CLEC16AQ2KHT3 1053 aa9.48□□□□□ -0.89
HDAC3-202ENST00000459727 CIAPIN1Q6FI81 312 aa9.48□□□□□ -0.89
HDAC3-202ENST00000459727 MFSD5Q6N075 450 aa9.48□□□□□ -0.89
HDAC3-202ENST00000459727 MIS18BP1Q6P0N0 1132 aa9.48□□□□□ -0.89
HDAC3-202ENST00000459727 CCDC137Q6PK04 289 aaKnown RBP9.48□□□□□ -0.89
HDAC3-202ENST00000459727 MMS22LQ6ZRQ5 1243 aa9.48□□□□□ -0.89
HDAC3-202ENST00000459727 CCDC121Q6ZUS5 278 aa9.48□□□□□ -0.89
HDAC3-202ENST00000459727 NOP9Q86U38 636 aaKnown RBP9.48□□□□□ -0.89
HDAC3-202ENST00000459727 SUGP1Q8IWZ8 645 aaKnown RBP9.48□□□□□ -0.89
HDAC3-202ENST00000459727 CCDC105Q8IYK2 499 aa9.48□□□□□ -0.89
HDAC3-202ENST00000459727 CACNA2D3Q8IZS8 1091 aa9.48□□□□□ -0.89
HDAC3-202ENST00000459727 MICALL1Q8N3F8 863 aa9.48□□□□□ -0.89
HDAC3-202ENST00000459727 RDH13Q8NBN7 331 aa9.48□□□□□ -0.89
HDAC3-202ENST00000459727 NSUN6Q8TEA1 469 aaKnown RBP9.48□□□□□ -0.89
HDAC3-202ENST00000459727 SLC16A10Q8TF71 515 aa9.48□□□□□ -0.89
HDAC3-202ENST00000459727 POMGNT1Q8WZA1 660 aa9.48□□□□□ -0.89
HDAC3-202ENST00000459727 ALG3Q92685 438 aa9.48□□□□□ -0.89
HDAC3-202ENST00000459727 CYFIP2Q96F07 1278 aa9.48□□□□□ -0.89
HDAC3-202ENST00000459727 C12orf42Q96LP6 360 aa9.48□□□□□ -0.89
HDAC3-202ENST00000459727 HINFPQ9BQA5 517 aa9.48□□□□□ -0.89
HDAC3-202ENST00000459727 TMEM39BQ9GZU3 492 aa9.48□□□□□ -0.89
HDAC3-202ENST00000459727 DPH5Q9H2P9 285 aa9.48□□□□□ -0.89
HDAC3-202ENST00000459727 PCIF1Q9H4Z3 704 aa9.48□□□□□ -0.89
HDAC3-202ENST00000459727 CCDC134Q9H6E4 229 aa9.48□□□□□ -0.89
HDAC3-202ENST00000459727 PPCSQ9HAB8 311 aa9.48□□□□□ -0.89
HDAC3-202ENST00000459727 ATP6V0A4Q9HBG4 840 aa9.48□□□□□ -0.89
HDAC3-202ENST00000459727 FBXO28Q9NVF7 368 aa9.48□□□□□ -0.89
HDAC3-202ENST00000459727 COL20A1Q9P218 1284 aa9.48□□□□□ -0.89
HDAC3-202ENST00000459727 ZNF219Q9P2Y4 722 aaPredicted RBP9.48□□□□□ -0.89
HDAC3-202ENST00000459727 PGAP2Q9UHJ9 254 aa9.48□□□□□ -0.89
HDAC3-202ENST00000459727 COG5Q9UP83 839 aa9.48□□□□□ -0.89
HDAC3-202ENST00000459727 TRPC6Q9Y210 931 aa9.48□□□□□ -0.89
HDAC3-202ENST00000459727 ATP8A1Q9Y2Q0 1164 aa9.48□□□□□ -0.89
HDAC3-202ENST00000459727 SSC5DA1L4H1 1573 aa9.47□□□□□ -0.89
HDAC3-202ENST00000459727 PHF20L1A8MW92 1017 aa9.47□□□□□ -0.89
HDAC3-202ENST00000459727 C19orf81C9J6K1 198 aa9.47□□□□□ -0.89
HDAC3-202ENST00000459727 FSCN2O14926 492 aa9.47□□□□□ -0.89
HDAC3-202ENST00000459727 HNRNPDLO14979 420 aaKnown RBP9.47□□□□□ -0.89
HDAC3-202ENST00000459727 TRIM66O15016 1216 aa9.47□□□□□ -0.89
HDAC3-202ENST00000459727 ZBTB39O15060 712 aa9.47□□□□□ -0.89
HDAC3-202ENST00000459727 PIGRP01833 764 aa9.47□□□□□ -0.89
HDAC3-202ENST00000459727 GHRP10912 638 aa9.47□□□□□ -0.89
HDAC3-202ENST00000459727 MAPK4P31152 587 aa9.47□□□□□ -0.89
HDAC3-202ENST00000459727 COILP38432 576 aaPredicted RBP9.47□□□□□ -0.89
HDAC3-202ENST00000459727 PTGIRP43119 386 aa9.47□□□□□ -0.89
HDAC3-202ENST00000459727 NSFP46459 744 aaKnown RBP9.47□□□□□ -0.89
HDAC3-202ENST00000459727 ZNF280AP59817 542 aaPredicted RBP9.47□□□□□ -0.89
HDAC3-202ENST00000459727 DLG4P78352 724 aa9.47□□□□□ -0.89
HDAC3-202ENST00000459727 CLDN10P78369 228 aa9.47□□□□□ -0.89
HDAC3-202ENST00000459727 FMO1Q01740 532 aa9.47□□□□□ -0.89
HDAC3-202ENST00000459727 GUCY1A3Q02108 690 aa9.47□□□□□ -0.89
HDAC3-202ENST00000459727 PSMD6Q15008 389 aa9.47□□□□□ -0.89
HDAC3-202ENST00000459727 XKR3Q5GH77 459 aa9.47□□□□□ -0.89
HDAC3-202ENST00000459727 C1orf220Q5T0J3 134 aa9.47□□□□□ -0.89
HDAC3-202ENST00000459727 VSIG10LQ86VR7 867 aa9.47□□□□□ -0.89
HDAC3-202ENST00000459727 KSR1Q8IVT5 923 aa9.47□□□□□ -0.89
HDAC3-202ENST00000459727 EXOC8Q8IYI6 725 aa9.47□□□□□ -0.89
HDAC3-202ENST00000459727 RIBC1Q8N443 379 aaPredicted RBP9.47□□□□□ -0.89
HDAC3-202ENST00000459727 PRELID2Q8N945 189 aa9.47□□□□□ -0.89
HDAC3-202ENST00000459727 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.47□□□□□ -0.89
HDAC3-202ENST00000459727 HELQQ8TDG4 1101 aa9.47□□□□□ -0.89
HDAC3-202ENST00000459727 SLC20A1Q8WUM9 679 aa9.47□□□□□ -0.89
HDAC3-202ENST00000459727 JDP2Q8WYK2 163 aa9.47□□□□□ -0.89
HDAC3-202ENST00000459727 CHMP6Q96FZ7 201 aa9.47□□□□□ -0.89
HDAC3-202ENST00000459727 BICD1Q96G01 975 aa9.47□□□□□ -0.89
HDAC3-202ENST00000459727 CEP170P1Q96L14 293 aa9.47□□□□□ -0.89
HDAC3-202ENST00000459727 TRERF1Q96PN7 1200 aa9.47□□□□□ -0.89
HDAC3-202ENST00000459727 FNBP1Q96RU3 617 aa9.47□□□□□ -0.89
HDAC3-202ENST00000459727 TRIM51Q9BSJ1 452 aa9.47□□□□□ -0.89
HDAC3-202ENST00000459727 MYOZ2Q9NPC6 264 aa9.47□□□□□ -0.89
HDAC3-202ENST00000459727 TAS2R14Q9NYV8 317 aa9.47□□□□□ -0.89
HDAC3-202ENST00000459727 BCCIPQ9P287 314 aaKnown RBP eCLIP9.47□□□□□ -0.89
HDAC3-202ENST00000459727 CNOT8Q9UFF9 292 aaKnown RBP9.47□□□□□ -0.89
HDAC3-202ENST00000459727 NOVA2Q9UNW9 492 aaKnown RBP9.47□□□□□ -0.89
HDAC3-202ENST00000459727 TESPA1A2RU30 521 aaPredicted RBP9.46□□□□□ -0.9
HDAC3-202ENST00000459727 WNT10BO00744 389 aa9.46□□□□□ -0.9
HDAC3-202ENST00000459727 ASAP2O43150 1006 aa9.46□□□□□ -0.9
HDAC3-202ENST00000459727 CYP26A1O43174 497 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms